EMLSAG00000003369, EMLSAG00000003369-686135 (gene) Lepeophtheirus salmonis
|
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000003369 vs. GO
Match: - (symbol:psmb2 "proteasome (prosome, macropain) subunit, beta type, 2" species:7955 "Danio rerio" [GO:0051603 "proteolysis involved in cellular protein catabolic process" evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity" evidence=IEA] [GO:0005839 "proteasome core complex" evidence=IEA] [GO:0004175 "endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 ZFIN:ZDB-GENE-040718-353 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 MEROPS:T01.984 HOGENOM:HOG000188743 KO:K02734 OMA:HFVRGEL CTD:5690 GeneTree:ENSGT00640000091536 HOVERGEN:HBG000815 OrthoDB:EOG7N63NQ TreeFam:TF106219 EMBL:CU928077 EMBL:CU929178 EMBL:BC075983 RefSeq:NP_001002609.1 UniGene:Dr.80734 STRING:7955.ENSDARP00000041113 Ensembl:ENSDART00000041114 GeneID:436882 KEGG:dre:436882 InParanoid:Q6DHI9 NextBio:20831310 PRO:PR:Q6DHI9 Uniprot:Q6DHI9) HSP 1 Score: 62.003 bits (149), Expect = 4.174e-12 Identity = 26/68 (38.24%), Postives = 42/68 (61.76%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
M+ L + K +++ Y ++ IL+ YRPD+T E D +K C E+ KR I+NLP+F V++I+K
Sbjct: 118 MDYLSALAKAPFAAHGYGAFLTLSILDRYYRPDLTREEAVDLLKKCLEELNKRFILNLPSFTVRLIDK 185
BLAST of EMLSAG00000003369 vs. GO
Match: - (symbol:CAGL0H09548g species:5478 "Candida glabrata" [GO:0043161 "proteasome-mediated ubiquitin-dependent protein catabolic process" evidence=IEA] [GO:0010499 "proteasomal ubiquitin-independent protein catabolic process" evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0019774 "proteasome core complex, beta-subunit complex" evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane" evidence=IEA] [GO:0061133 "endopeptidase activator activity" evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity" evidence=IEA] InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737 EMBL:CR380954 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 MEROPS:T01.984 HOGENOM:HOG000188743 KO:K02734 OMA:HFVRGEL OrthoDB:EOG7SJDGT RefSeq:XP_447214.1 ProteinModelPortal:Q6FRD0 SMR:Q6FRD0 GeneID:2888716 KEGG:cgr:CAGL0H09548g Uniprot:Q6FRD0) HSP 1 Score: 58.9214 bits (141), Expect = 4.267e-11 Identity = 24/61 (39.34%), Postives = 41/61 (67.21%), Query Frame = 0
Query: 8 VKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
V ++++ Y G ++ +L+H+YRPDMT +EG + +K C E+QKR+ I+ VKI++K
Sbjct: 126 VDLPYAAHGYSGFYTFSLLDHHYRPDMTTTEGLELLKLCIAELQKRMPIDFKGVIVKIVDK 186
BLAST of EMLSAG00000003369 vs. GO
Match: - (symbol:PRE1 "Beta 4 subunit of the 20S proteasome" species:559292 "Saccharomyces cerevisiae S288c" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0004175 "endopeptidase activity" evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity" evidence=IEA] [GO:0005839 "proteasome core complex" evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein catabolic process" evidence=IEA] [GO:0034515 "proteasome storage granule" evidence=IC] [GO:0061133 "endopeptidase activator activity" evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane" evidence=IDA] [GO:0019774 "proteasome core complex, beta-subunit complex" evidence=IDA] [GO:0010499 "proteasomal ubiquitin-independent protein catabolic process" evidence=IDA] [GO:0043161 "proteasome-mediated ubiquitin-dependent protein catabolic process" evidence=IDA] [GO:0000502 "proteasome complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA] InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 SGD:S000000814 GO:GO:0005634 GO:GO:0043161 GO:GO:0005789 EMBL:BK006939 GO:GO:0061133 EMBL:U18778 GO:GO:0010499 PDB:1VSY PDB:3L5Q PDBsum:1VSY PDBsum:3L5Q GO:GO:0034515 GO:GO:0004298 PDB:4G4S PDBsum:4G4S PDB:4B4T PDB:4C0V PDBsum:4B4T PDBsum:4C0V eggNOG:COG0638 PDB:1FNT PDB:1G0U PDB:1G65 PDB:1JD2 PDB:1RYP PDB:1Z7Q PDB:2F16 PDB:2FAK PDB:2GPL PDB:2ZCY PDB:3BDM PDB:3D29 PDB:3DY3 PDB:3DY4 PDB:3E47 PDB:3GPJ PDB:3GPT PDB:3GPW PDB:3HYE PDB:3MG0 PDB:3MG4 PDB:3MG6 PDB:3MG7 PDB:3MG8 PDB:3NZJ PDB:3NZW PDB:3NZX PDB:3OEU PDB:3OEV PDB:3OKJ PDB:3SDI PDB:3SDK PDB:3SHJ PDB:3TDD PDB:3UN4 PDB:3UN8 PDB:4EU2 PDB:4FZC PDB:4FZG PDB:4GK7 PDB:4HNP PDB:4HRC PDB:4HRD PDB:4INR PDB:4INT PDB:4INU PDB:4J70 PDB:4JSQ PDB:4JSU PDB:4JT0 PDB:4LQI PDBsum:1FNT PDBsum:1G0U PDBsum:1G65 PDBsum:1JD2 PDBsum:1RYP PDBsum:1Z7Q PDBsum:2F16 PDBsum:2FAK PDBsum:2GPL PDBsum:2ZCY PDBsum:3BDM PDBsum:3D29 PDBsum:3DY3 PDBsum:3DY4 PDBsum:3E47 PDBsum:3GPJ PDBsum:3GPT PDBsum:3GPW PDBsum:3HYE PDBsum:3MG0 PDBsum:3MG4 PDBsum:3MG6 PDBsum:3MG7 PDBsum:3MG8 PDBsum:3NZJ PDBsum:3NZW PDBsum:3NZX PDBsum:3OEU PDBsum:3OEV PDBsum:3OKJ PDBsum:3SDI PDBsum:3SDK PDBsum:3SHJ PDBsum:3TDD PDBsum:3UN4 PDBsum:3UN8 PDBsum:4EU2 PDBsum:4FZC PDBsum:4FZG PDBsum:4GK7 PDBsum:4HNP PDBsum:4HRC PDBsum:4HRD PDBsum:4INR PDBsum:4INT PDBsum:4INU PDBsum:4J70 PDBsum:4JSQ PDBsum:4JSU PDBsum:4JT0 PDBsum:4LQI GO:GO:0019774 MEROPS:T01.984 HOGENOM:HOG000188743 KO:K02734 OMA:HFVRGEL GeneTree:ENSGT00640000091536 OrthoDB:EOG7SJDGT EMBL:X56812 EMBL:AY557807 PIR:S50470 RefSeq:NP_010928.1 ProteinModelPortal:P22141 SMR:P22141 BioGrid:36744 DIP:DIP-2808N IntAct:P22141 MINT:MINT-592869 STRING:4932.YER012W BindingDB:P22141 ChEMBL:CHEMBL4206 PaxDb:P22141 PeptideAtlas:P22141 EnsemblFungi:YER012W GeneID:856731 KEGG:sce:YER012W CYGD:YER012w BioCyc:YEAST:G3O-30199-MONOMER EvolutionaryTrace:P22141 NextBio:982843 PRO:PR:P22141 Genevestigator:P22141 Uniprot:P22141) HSP 1 Score: 57.7658 bits (138), Expect = 1.321e-10 Identity = 23/61 (37.70%), Postives = 40/61 (65.57%), Query Frame = 0
Query: 8 VKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
V+ + ++ Y G ++ +L+H+YRPDMT EG D +K C E++KR+ ++ VKI++K
Sbjct: 126 VELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKRMPMDFKGVIVKIVDK 186
BLAST of EMLSAG00000003369 vs. GO
Match: - (symbol:Prosbeta4 "Proteasome beta4 subunit" species:7227 "Drosophila melanogaster" [GO:0004175 "endopeptidase activity" evidence=IC;ISS] [GO:0005839 "proteasome core complex" evidence=ISS;IDA] [GO:0032504 "multicellular organism reproduction" evidence=IEP] [GO:0043161 "proteasome-mediated ubiquitin-dependent protein catabolic process" evidence=IC] [GO:0051603 "proteolysis involved in cellular protein catabolic process" evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity" evidence=IEA] [GO:0009987 "cellular process" evidence=IMP] [GO:0006974 "cellular response to DNA damage stimulus" evidence=IMP] InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 EMBL:AE014134 GO:GO:0032504 GO:GO:0006974 GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 MEROPS:T01.984 KO:K02734 OMA:HFVRGEL GeneTree:ENSGT00640000091536 OrthoDB:EOG7N63NQ EMBL:AY113632 RefSeq:NP_001260511.1 RefSeq:NP_609804.1 UniGene:Dm.11371 MINT:MINT-289707 STRING:7227.FBpp0080490 EnsemblMetazoa:FBtr0080936 GeneID:34999 KEGG:dme:Dmel_CG17331 UCSC:CG17331-RA FlyBase:FBgn0032596 InParanoid:Q9VJJ0 ChiTaRS:CG17331 GenomeRNAi:34999 NextBio:791321 PRO:PR:Q9VJJ0 Uniprot:Q9VJJ0) HSP 1 Score: 52.373 bits (124), Expect = 1.252e-8 Identity = 21/68 (30.88%), Postives = 39/68 (57.35%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
++ L + ++ + Y F+ I + + P++T +E D K C E+QKRL++NL NF V +++K
Sbjct: 118 IDYLANALPVNYAGHGYGAIFASSIYDRYWHPNITQAEAYDVFKKCIAEIQKRLVVNLKNFTVAVVDK 185
BLAST of EMLSAG00000003369 vs. GO
Match: - (symbol:PBD1 "20S proteasome beta subunit D1" species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008233 "peptidase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=TAS] [GO:0005773 "vacuole" evidence=IDA] [GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043161 "proteasome-mediated ubiquitin-dependent protein catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051788 "response to misfolded protein" evidence=RCA] [GO:0080129 "proteasome core complex assembly" evidence=RCA] [GO:0005839 "proteasome core complex" evidence=TAS] InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005829 GO:GO:0005886 GO:GO:0005634 GO:GO:0005774 GO:GO:0048046 EMBL:CP002686 GO:GO:0000502 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 EMBL:AP000731 eggNOG:COG0638 EMBL:Y13692 EMBL:AF043534 EMBL:AY052249 EMBL:AY143817 PIR:T51982 RefSeq:NP_188902.1 UniGene:At.398 UniGene:At.48695 ProteinModelPortal:O23714 SMR:O23714 BioGrid:7166 IntAct:O23714 STRING:3702.AT3G22630.1-P MEROPS:T01.984 PaxDb:O23714 PRIDE:O23714 EnsemblPlants:AT3G22630.1 GeneID:821834 KEGG:ath:AT3G22630 TAIR:AT3G22630 HOGENOM:HOG000188743 InParanoid:O23714 KO:K02734 OMA:HFVRGEL PhylomeDB:O23714 ProtClustDB:CLSN2684151 BioCyc:ARA:AT3G22630-MONOMER Genevestigator:O23714 Uniprot:O23714) HSP 1 Score: 52.373 bits (124), Expect = 1.387e-8 Identity = 19/60 (31.67%), Postives = 37/60 (61.67%), Query Frame = 0
Query: 9 KTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
K + ++ Y FS+ ++ +YR DM++ E + + C E++ RL++ PNF +KI++K
Sbjct: 125 KVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVVAPPNFVIKIVDK 184
BLAST of EMLSAG00000003369 vs. GO
Match: - (symbol:pbs-4 species:6239 "Caenorhabditis elegans" [GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination of adult lifespan" evidence=IMP] InterPro:IPR001353 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 MEROPS:T01.984 HOGENOM:HOG000188743 KO:K02734 EMBL:FO080916 PIR:T29206 RefSeq:NP_491261.1 UniGene:Cel.20577 ProteinModelPortal:P91477 SMR:P91477 STRING:6239.T20F5.2 PaxDb:P91477 GeneID:171975 KEGG:cel:CELE_T20F5.2 UCSC:T20F5.2 CTD:171975 WormBase:T20F5.2 InParanoid:P91477 NextBio:873489 PRO:PR:P91477 Uniprot:P91477) HSP 1 Score: 46.9802 bits (110), Expect = 1.183e-6 Identity = 19/50 (38.00%), Postives = 30/50 (60.00%), Query Frame = 0
Query: 19 GTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
G F I++ Y+ DMT +EG M C E ++R + N+P ++V II+K
Sbjct: 139 GRFCYAIMDREYKKDMTEAEGLALMNKCIGEAKRRFVANIPGYKVVIIDK 188
BLAST of EMLSAG00000003369 vs. GO
Match: - (symbol:pbs-4 "Proteasome subunit beta type-2" species:6239 "Caenorhabditis elegans" [GO:0000502 "proteasome complex" evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005839 "proteasome core complex" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein catabolic process" evidence=IEA] InterPro:IPR001353 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 MEROPS:T01.984 HOGENOM:HOG000188743 KO:K02734 EMBL:FO080916 PIR:T29206 RefSeq:NP_491261.1 UniGene:Cel.20577 ProteinModelPortal:P91477 SMR:P91477 STRING:6239.T20F5.2 PaxDb:P91477 GeneID:171975 KEGG:cel:CELE_T20F5.2 UCSC:T20F5.2 CTD:171975 WormBase:T20F5.2 InParanoid:P91477 NextBio:873489 PRO:PR:P91477 Uniprot:P91477) HSP 1 Score: 46.9802 bits (110), Expect = 1.183e-6 Identity = 19/50 (38.00%), Postives = 30/50 (60.00%), Query Frame = 0
Query: 19 GTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
G F I++ Y+ DMT +EG M C E ++R + N+P ++V II+K
Sbjct: 139 GRFCYAIMDREYKKDMTEAEGLALMNKCIGEAKRRFVANIPGYKVVIIDK 188
BLAST of EMLSAG00000003369 vs. GO
Match: - (symbol:PSMB2 "Proteasome subunit beta type" species:9615 "Canis lupus familiaris" [GO:0004298 "threonine-type endopeptidase activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005839 "proteasome core complex" evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein catabolic process" evidence=IEA] InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 KO:K02734 OMA:HFVRGEL CTD:5690 GeneTree:ENSGT00640000091536 OrthoDB:EOG7N63NQ TreeFam:TF106219 EMBL:AAEX03009649 EMBL:AAEX03009650 RefSeq:XP_532564.3 ProteinModelPortal:E2QW34 Ensembl:ENSCAFT00000005688 GeneID:475338 KEGG:cfa:475338 NextBio:20851189 Uniprot:E2QW34) HSP 1 Score: 46.9802 bits (110), Expect = 1.422e-6 Identity = 22/68 (32.35%), Postives = 39/68 (57.35%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
M+ L + K +++ Y ++ IL+ Y P ++ + ++ C E+QKR I+NLP F V+II+K
Sbjct: 118 MDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRIIDK 185
BLAST of EMLSAG00000003369 vs. GO
Match: - (symbol:PSMB2 "Proteasome subunit beta type-2" species:9606 "Homo sapiens" [GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0000502 "proteasome complex" evidence=TAS] [GO:0002474 "antigen processing and presentation of peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent" evidence=TAS] [GO:0004298 "threonine-type endopeptidase activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0005839 "proteasome core complex" evidence=ISS] [GO:0006521 "regulation of cellular amino acid metabolic process" evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010243 "response to organonitrogen compound" evidence=IEA] [GO:0010467 "gene expression" evidence=TAS] [GO:0014070 "response to organic cyclic compound" evidence=IEA] [GO:0016032 "viral process" evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145 "anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process" evidence=TAS] [GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS] [GO:0042590 "antigen processing and presentation of exogenous peptide antigen via MHC class I" evidence=TAS] [GO:0042981 "regulation of apoptotic process" evidence=TAS] [GO:0043066 "negative regulation of apoptotic process" evidence=TAS] [GO:0044281 "small molecule metabolic process" evidence=TAS] [GO:0051436 "negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437 "positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle" evidence=TAS] [GO:0070062 "extracellular vesicular exosome" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005829 GO:GO:0070062 Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0016032 GO:GO:0043066 GO:GO:0005654 GO:GO:0002479 Reactome:REACT_21300 GO:GO:0044281 GO:GO:0006977 GO:GO:0006915 EMBL:CH471059 GO:GO:0000082 GO:GO:0014070 GO:GO:0051436 EMBL:AL354864 GO:GO:0010243 GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 EMBL:AL157951 GO:GO:0006521 Reactome:REACT_383 DrugBank:DB00188 GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 ChEMBL:CHEMBL2364701 MEROPS:T01.984 HOGENOM:HOG000188743 KO:K02734 OMA:HFVRGEL CTD:5690 HOVERGEN:HBG000815 OrthoDB:EOG7N63NQ TreeFam:TF106219 EMBL:D26599 EMBL:CR456862 EMBL:BT007137 EMBL:AL357035 EMBL:BC101836 EMBL:BC105126 EMBL:BC107901 PIR:S55040 RefSeq:NP_002785.1 UniGene:Hs.471441 ProteinModelPortal:P49721 SMR:P49721 BioGrid:111663 IntAct:P49721 MINT:MINT-1144735 STRING:9606.ENSP00000362334 BindingDB:P49721 PhosphoSite:P49721 DMDM:1709762 OGP:P49721 REPRODUCTION-2DPAGE:IPI00028006 REPRODUCTION-2DPAGE:P49721 PaxDb:P49721 PeptideAtlas:P49721 PRIDE:P49721 DNASU:5690 Ensembl:ENST00000373237 GeneID:5690 KEGG:hsa:5690 UCSC:uc001bzf.2 GeneCards:GC01M036042 HGNC:HGNC:9539 HPA:HPA026322 HPA:HPA026324 MIM:602175 neXtProt:NX_P49721 PharmGKB:PA33884 PhylomeDB:P49721 ChiTaRS:PSMB2 GeneWiki:PSMB2 GenomeRNAi:5690 NextBio:22102 PRO:PR:P49721 Bgee:P49721 CleanEx:HS_PSMB2 Genevestigator:P49721 Uniprot:P49721) HSP 1 Score: 46.595 bits (109), Expect = 1.593e-6 Identity = 22/68 (32.35%), Postives = 39/68 (57.35%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
M+ L + K +++ Y ++ IL+ Y P ++ + ++ C E+QKR I+NLP F V+II+K
Sbjct: 118 MDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRIIDK 185
BLAST of EMLSAG00000003369 vs. GO
Match: - (symbol:PSMB2 "Proteasome subunit beta type" species:9031 "Gallus gallus" [GO:0004298 "threonine-type endopeptidase activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005839 "proteasome core complex" evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein catabolic process" evidence=IEA] InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 KO:K02734 CTD:5690 GeneTree:ENSGT00640000091536 EMBL:AADN03008235 RefSeq:XP_417777.2 UniGene:Gga.8492 Ensembl:ENSGALT00000044213 GeneID:419630 KEGG:gga:419630 Uniprot:R4GLB3) HSP 1 Score: 46.2098 bits (108), Expect = 2.287e-6 Identity = 21/68 (30.88%), Postives = 39/68 (57.35%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
M+ L + K +++ Y ++ IL+ Y+P +T E + +K C E+QKR ++NL +F + I+K
Sbjct: 118 MDYLAALAKAPFAAHGYGAFLTLSILDRYYKPGITREEAVELLKKCLEELQKRFVLNLTSFNARFIDK 185
BLAST of EMLSAG00000003369 vs. C. finmarchicus
Match: gi|592788573|gb|GAXK01165995.1| (TSA: Calanus finmarchicus comp1701_c0_seq1 transcribed RNA sequence) HSP 1 Score: 65.855 bits (159), Expect = 8.632e-14 Identity = 28/68 (41.18%), Postives = 45/68 (66.18%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
M+ L M+K ++++ Y G F+ I++ +Y+ DMT + M +C EVQKRL++NLPNF V I++K
Sbjct: 390 MDYLASMIKAPYAAHGYGGFFTTSIMDRHYKKDMTRQQAYALMIECVKEVQKRLVLNLPNFAVVIVDK 593
BLAST of EMLSAG00000003369 vs. C. finmarchicus
Match: gi|592853775|gb|GAXK01103769.1| (TSA: Calanus finmarchicus comp166781_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 2.199e-1 Identity = 18/49 (36.73%), Postives = 25/49 (51.02%), Query Frame = 0
Query: 18 RGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKII 66
RG+F + + Y P+ TI C+ +DC E QK L + LP F I
Sbjct: 79 RGSFQNSV*SPKYSPNPTILTSCNSNRDC-LE*QKSLDLYLPMFYYLFI 222
BLAST of EMLSAG00000003369 vs. C. finmarchicus
Match: gi|592941823|gb|GAXK01016730.1| (TSA: Calanus finmarchicus comp7941563_c0_seq1 transcribed RNA sequence) HSP 1 Score: 28.8758 bits (63), Expect = 9.417e-1 Identity = 11/29 (37.93%), Postives = 18/29 (62.07%), Query Frame = 0
Query: 5 VRMVKTEHSSYDYRGTFSIDILNHNYRPD 33
VR V + +Y+YR F+ D++N + PD
Sbjct: 437 VRSVPMKQGTYNYRLRFTWDLINTKFNPD 523
BLAST of EMLSAG00000003369 vs. C. finmarchicus
Match: gi|592796998|gb|GAXK01157570.1| (TSA: Calanus finmarchicus comp822808_c1_seq1 transcribed RNA sequence) HSP 1 Score: 28.8758 bits (63), Expect = 1.500e+0 Identity = 18/57 (31.58%), Postives = 29/57 (50.88%), Query Frame = 0
Query: 2 NNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINL 58
N ++ KTE++ YD I+ +NY D T DHM D + ++++INL
Sbjct: 3192 NERIQQTKTENNEYD--------IVTNNYDYD-TYEYNSDHMSDLNYDTDQQIVINL 3335
BLAST of EMLSAG00000003369 vs. C. finmarchicus
Match: gi|592869767|gb|GAXK01087795.1| (TSA: Calanus finmarchicus comp918085_c0_seq2 transcribed RNA sequence) HSP 1 Score: 27.335 bits (59), Expect = 3.361e+0 Identity = 13/36 (36.11%), Postives = 17/36 (47.22%), Query Frame = 0
Query: 11 EHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDC 46
HS + +RG FS+D H PD + C H C
Sbjct: 337 SHSHHWHRGKFSLD---HKVHPDKLLHPCCTHFLQC 435
BLAST of EMLSAG00000003369 vs. C. finmarchicus
Match: gi|592921629|gb|GAXK01036746.1| (TSA: Calanus finmarchicus comp406945_c0_seq1 transcribed RNA sequence) HSP 1 Score: 27.7202 bits (60), Expect = 3.567e+0 Identity = 11/41 (26.83%), Postives = 26/41 (63.41%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCD 41
MN + ++ ++EH ++++ GTF ++ N R ++T++ D
Sbjct: 1448 MNQVQKIFESEHEAHEFSGTFYVE---ENTRTEVTVTLSID 1561
BLAST of EMLSAG00000003369 vs. L. salmonis peptides
Match: EMLSAP00000003369 (pep:novel supercontig:LSalAtl2s:LSalAtl2s184:306328:306544:1 gene:EMLSAG00000003369 transcript:EMLSAT00000003369 description:"maker-LSalAtl2s184-snap-gene-3.2") HSP 1 Score: 148.288 bits (373), Expect = 6.371e-48 Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINKAA 70
MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINKAA
Sbjct: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINKAA 70
BLAST of EMLSAG00000003369 vs. L. salmonis peptides
Match: EMLSAP00000004632 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2413:634:4835:1 gene:EMLSAG00000004632 transcript:EMLSAT00000004632 description:"maker-LSalAtl2s2413-augustus-gene-0.6") HSP 1 Score: 93.9745 bits (232), Expect = 4.332e-25 Identity = 43/68 (63.24%), Postives = 51/68 (75.00%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
++ L MV TEH+S+ Y G FS IL+ NYRPDMT+ EG D +K C EVQKRLIINLPNF V+IINK
Sbjct: 161 LDYLAGMVXTEHASHGYGGIFSSGILDRNYRPDMTVEEGYDLIKTCVAEVQKRLIINLPNFSVQIINK 228
BLAST of EMLSAG00000003369 vs. L. salmonis peptides
Match: EMLSAP00000004986 (pep:novel supercontig:LSalAtl2s:LSalAtl2s260:265877:269135:1 gene:EMLSAG00000004986 transcript:EMLSAT00000004986 description:"snap_masked-LSalAtl2s260-processed-gene-2.9") HSP 1 Score: 82.4185 bits (202), Expect = 8.058e-21 Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
M+ L M KTEH+S+ Y FS IL+ NYRPDMT+ E D +K C EVQKRLI+NL NF V+II+K
Sbjct: 224 MDYLAGMXKTEHASHGYGSIFSSGILDRNYRPDMTVEEDYDLIKTCVAEVQKRLIMNLSNFSVQIIDK 291
BLAST of EMLSAG00000003369 vs. SwissProt
Match: gi|730378|sp|P22141.2|PSB4_YEAST (RecName: Full=Proteasome subunit beta type-4; AltName: Full=Macropain subunit C11; AltName: Full=Multicatalytic endopeptidase complex subunit C11; AltName: Full=Proteasome component C11; AltName: Full=Proteinase YSCE subunit 11) HSP 1 Score: 57.7658 bits (138), Expect = 6.437e-11 Identity = 23/61 (37.70%), Postives = 40/61 (65.57%), Query Frame = 0
Query: 8 VKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
V+ + ++ Y G ++ +L+H+YRPDMT EG D +K C E++KR+ ++ VKI++K
Sbjct: 126 VELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKRMPMDFKGVIVKIVDK 186
BLAST of EMLSAG00000003369 vs. SwissProt
Match: gi|17380180|sp|O24633.1|PSB2B_ARATH (RecName: Full=Proteasome subunit beta type-2-B; AltName: Full=20S proteasome beta subunit D-2; AltName: Full=Proteasome component GA; AltName: Full=Proteasome subunit beta type-4) HSP 1 Score: 52.7582 bits (125), Expect = 4.721e-9 Identity = 20/60 (33.33%), Postives = 37/60 (61.67%), Query Frame = 0
Query: 9 KTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
K + ++ Y FS+ ++ +YR DM++ E + + C E++ RL+I PNF +KI++K
Sbjct: 125 KVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVIAPPNFVIKIVDK 184
BLAST of EMLSAG00000003369 vs. SwissProt
Match: gi|17380179|sp|O23714.1|PSB2A_ARATH (RecName: Full=Proteasome subunit beta type-2-A; AltName: Full=20S proteasome beta subunit D-1; AltName: Full=Proteasome component GB; AltName: Full=Proteasome subunit beta type-4) HSP 1 Score: 52.373 bits (124), Expect = 7.656e-9 Identity = 19/60 (31.67%), Postives = 37/60 (61.67%), Query Frame = 0
Query: 9 KTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
K + ++ Y FS+ ++ +YR DM++ E + + C E++ RL++ PNF +KI++K
Sbjct: 125 KVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVVAPPNFVIKIVDK 184
BLAST of EMLSAG00000003369 vs. SwissProt
Match: gi|109940125|sp|Q9LST6.2|PSB2_ORYSJ (RecName: Full=Proteasome subunit beta type-2; AltName: Full=20S proteasome alpha subunit D; AltName: Full=20S proteasome subunit beta-4) HSP 1 Score: 50.8322 bits (120), Expect = 2.877e-8 Identity = 20/60 (33.33%), Postives = 36/60 (60.00%), Query Frame = 0
Query: 9 KTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
K E ++ Y F + +++ YRPDM++ E D + C E++ RL++ NF +KI++K
Sbjct: 125 KIEKGAFGYGSYFCLSLMDKLYRPDMSVEEAVDLVDKCIKEIRLRLVVAPQNFIIKIVDK 184
BLAST of EMLSAG00000003369 vs. SwissProt
Match: gi|1709762|sp|P49721.1|PSB2_HUMAN (RecName: Full=Proteasome subunit beta type-2; AltName: Full=Macropain subunit C7-I; AltName: Full=Multicatalytic endopeptidase complex subunit C7-I; AltName: Full=Proteasome component C7-I) HSP 1 Score: 46.595 bits (109), Expect = 8.626e-7 Identity = 22/68 (32.35%), Postives = 39/68 (57.35%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
M+ L + K +++ Y ++ IL+ Y P ++ + ++ C E+QKR I+NLP F V+II+K
Sbjct: 118 MDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRIIDK 185
BLAST of EMLSAG00000003369 vs. Select Arthropod Genomes
Match: EFX69663.1 (hypothetical protein DAPPUDRAFT_300859 [Daphnia pulex]) HSP 1 Score: 82.0333 bits (201), Expect = 1.886e-20 Identity = 36/68 (52.94%), Postives = 49/68 (72.06%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
M+ L M+KT +++ Y G FSI I++ YRPD+T E D MK C E+QKRLIINLPNF+VK+++K
Sbjct: 118 MDYLASMIKTPFATHGYGGMFSIGIMDRYYRPDLTEQEAYDIMKKCVAEIQKRLIINLPNFQVKVLDK 185
BLAST of EMLSAG00000003369 vs. Select Arthropod Genomes
Match: gb|EFA06200.1| (putative proteasome subunit beta type-2-like Protein [Tribolium castaneum]) HSP 1 Score: 67.781 bits (164), Expect = 5.429e-15 Identity = 27/68 (39.71%), Postives = 46/68 (67.65%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
M+ L + +++++ Y G FS+ I++ NY P MT +G + +K C EV RLI+NLPNF+V++++K
Sbjct: 118 MDYLASVASVDYAAHGYGGYFSLSIMDRNYLPTMTKDQGYELLKKCVKEVHTRLIVNLPNFKVQVVDK 185
BLAST of EMLSAG00000003369 vs. Select Arthropod Genomes
Match: gb|EEC10119.1| (20S proteasome, regulatory subunit beta, putative [Ixodes scapularis]) HSP 1 Score: 65.4698 bits (158), Expect = 4.382e-14 Identity = 27/68 (39.71%), Postives = 41/68 (60.29%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
M+ L M K + ++ Y F I +L+ YR DM E D +K C EVQKR ++NLP F+V++++K
Sbjct: 120 MDYLATMAKVPYGAHGYGAFFLISVLDRYYREDMNEEEAVDLLKKCVFEVQKRFLVNLPAFKVQVVDK 187
BLAST of EMLSAG00000003369 vs. Select Arthropod Genomes
Match: EEB17681.1 (proteasome subunit beta type, putative [Pediculus humanus corporis]) HSP 1 Score: 61.2326 bits (147), Expect = 1.413e-12 Identity = 24/65 (36.92%), Postives = 44/65 (67.69%), Query Frame = 0
Query: 4 LVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
L +VKT ++ + + G F + I++ +R D+TI EG + + C E+ KR++INLPNF+V+++ +
Sbjct: 122 LASLVKTPYAVHGFGGHFCLSIMDQLHRKDLTIEEGYEVLSKCIREIHKRVVINLPNFKVQVVTR 186
BLAST of EMLSAG00000003369 vs. Select Arthropod Genomes
Match: gb|KPM02567.1| (proteasome subunit beta type-2-like protein [Sarcoptes scabiei]) HSP 1 Score: 61.2326 bits (147), Expect = 2.107e-12 Identity = 26/68 (38.24%), Postives = 43/68 (63.24%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
M+ L V+ + Y G+F + +L+ Y+ D ++ EG + MK C E+QKRL+INLP F++ +I+K
Sbjct: 119 MDYLATSVQVPFGVHGYGGSFVLGLLDRIYKADCSVEEGIEMMKKCIAEIQKRLVINLPAFKLCMIDK 186
BLAST of EMLSAG00000003369 vs. Select Arthropod Genomes
Match: XP_393468.2 (PREDICTED: proteasome subunit beta type-2-like [Apis mellifera]) HSP 1 Score: 58.9214 bits (141), Expect = 1.174e-11 Identity = 28/68 (41.18%), Postives = 43/68 (63.24%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
++ L VK ++S+ Y G FS+ IL+ ++ D T E MK C E+ KRLI+NLPNF+V+ ++K
Sbjct: 118 IDYLASCVKVPYASHGYGGFFSLSILDRYHKYDSTEEEAYTLMKRCVREIHKRLIVNLPNFKVQKVSK 185
BLAST of EMLSAG00000003369 vs. Select Arthropod Genomes
Match: gb|KFM72065.1| (Proteasome subunit beta type-2, partial [Stegodyphus mimosarum]) HSP 1 Score: 55.4546 bits (132), Expect = 2.480e-10 Identity = 20/68 (29.41%), Postives = 43/68 (63.24%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
++ L M K +++ Y F + I++ YRPDM+++EG ++ C E+ R +++LP F+V+++++
Sbjct: 118 IDYLATMAKLPFAAHGYASYFVLSIMDRYYRPDMSVTEGTQLIEKCLKELNHRFLVSLPVFKVRMVDE 185
BLAST of EMLSAG00000003369 vs. Select Arthropod Genomes
Match: AGB93046.1 (proteasome beta4 subunit, isoform B [Drosophila melanogaster]) HSP 1 Score: 52.373 bits (124), Expect = 3.389e-9 Identity = 21/68 (30.88%), Postives = 39/68 (57.35%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
++ L + ++ + Y F+ I + + P++T +E D K C E+QKRL++NL NF V +++K
Sbjct: 118 IDYLANALPVNYAGHGYGAIFASSIYDRYWHPNITQAEAYDVFKKCIAEIQKRLVVNLKNFTVAVVDK 185
BLAST of EMLSAG00000003369 vs. Select Arthropod Genomes
Match: AAF53558.1 (proteasome beta4 subunit, isoform A [Drosophila melanogaster]) HSP 1 Score: 52.373 bits (124), Expect = 3.389e-9 Identity = 21/68 (30.88%), Postives = 39/68 (57.35%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
++ L + ++ + Y F+ I + + P++T +E D K C E+QKRL++NL NF V +++K
Sbjct: 118 IDYLANALPVNYAGHGYGAIFASSIYDRYWHPNITQAEAYDVFKKCIAEIQKRLVVNLKNFTVAVVDK 185
BLAST of EMLSAG00000003369 vs. Select Arthropod Genomes
Match: EAA14834.3 (AGAP008837-PA, partial [Anopheles gambiae str. PEST]) HSP 1 Score: 47.7506 bits (112), Expect = 1.755e-7 Identity = 22/68 (32.35%), Postives = 38/68 (55.88%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
++ L + +H ++ Y G F I + + +T E + + TE+ KRLI+NLPNF+V +I+K
Sbjct: 120 IDYLANSLPVKHGAHGYGGMFVNSIFDRYHHDKITQKEAYEIFRKGVTEIHKRLILNLPNFKVAVIDK 187
BLAST of EMLSAG00000003369 vs. nr
Match: gi|225713306|gb|ACO12499.1| (Proteasome subunit beta type-2 [Lepeophtheirus salmonis] >gi|290562017|gb|ADD38406.1| Proteasome subunit beta type-2 [Lepeophtheirus salmonis]) HSP 1 Score: 96.6709 bits (239), Expect = 1.960e-23 Identity = 45/68 (66.18%), Postives = 52/68 (76.47%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
M+ L MVKTEH+S+ Y G FS IL+ NYRPDMT+ EG D +K C EVQKRLIINLPNF V+IINK
Sbjct: 119 MDYLAGMVKTEHASHGYGGIFSSGILDRNYRPDMTVEEGYDLIKTCVAEVQKRLIINLPNFSVQIINK 186
BLAST of EMLSAG00000003369 vs. nr
Match: gi|225713254|gb|ACO12473.1| (Proteasome subunit beta type-2 [Lepeophtheirus salmonis] >gi|290561176|gb|ADD37990.1| Proteasome subunit beta type-2 [Lepeophtheirus salmonis]) HSP 1 Score: 91.6633 bits (226), Expect = 1.914e-21 Identity = 42/65 (64.62%), Postives = 49/65 (75.38%), Query Frame = 0
Query: 4 LVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
L MV+TEH+S+ Y G FS IL+ NYRPDMT+ EG D + C EVQKRLIINLPNF V+IINK
Sbjct: 122 LAGMVQTEHASHGYGGIFSSGILDRNYRPDMTVEEGYDLITTCVAEVQKRLIINLPNFSVQIINK 186
BLAST of EMLSAG00000003369 vs. nr
Match: gi|225709636|gb|ACO10664.1| (Proteasome subunit beta type-2 [Caligus rogercresseyi] >gi|225710786|gb|ACO11239.1| Proteasome subunit beta type-2 [Caligus rogercresseyi]) HSP 1 Score: 87.8113 bits (216), Expect = 5.671e-20 Identity = 38/68 (55.88%), Postives = 52/68 (76.47%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
M+ L MVKTEH+++ Y G FS IL+ +Y+PDMT+ EG + +K+C E+QKRLIINLPNF V+I+ K
Sbjct: 119 MDYLAGMVKTEHATHGYGGVFSSGILDRHYKPDMTVEEGYNLLKNCIAEIQKRLIINLPNFGVQIVTK 186
BLAST of EMLSAG00000003369 vs. nr
Match: gi|225711516|gb|ACO11604.1| (Proteasome subunit beta type-2 [Caligus rogercresseyi]) HSP 1 Score: 87.4261 bits (215), Expect = 6.114e-20 Identity = 38/68 (55.88%), Postives = 52/68 (76.47%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
M+ L MVKTEH+++ Y G FS IL+ +Y+PDMT+ EG + +K+C E+QKRLIINLPNF V+I+ K
Sbjct: 119 MDYLAGMVKTEHATHGYGGVFSSGILDRHYKPDMTVEEGYNLLKNCIAEIQKRLIINLPNFGVQIVTK 186
BLAST of EMLSAG00000003369 vs. nr
Match: gi|225717446|gb|ACO14569.1| (Proteasome subunit beta type-2 [Caligus clemensi]) HSP 1 Score: 87.4261 bits (215), Expect = 6.114e-20 Identity = 40/68 (58.82%), Postives = 51/68 (75.00%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
M+ L MVKTEH+S+ Y G FS IL+ +YRPDMT+ EG + +K C EVQKRLIINLPNF ++I +K
Sbjct: 119 MDYLAGMVKTEHASHGYGGIFSSGILDRHYRPDMTVEEGYNLIKTCIAEVQKRLIINLPNFGIQIASK 186
BLAST of EMLSAG00000003369 vs. nr
Match: gi|225709330|gb|ACO10511.1| (Proteasome subunit beta type-2 [Caligus rogercresseyi]) HSP 1 Score: 85.5001 bits (210), Expect = 4.229e-19 Identity = 37/68 (54.41%), Postives = 51/68 (75.00%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
M+ L MVKT H+++ Y G FS IL+ +Y+PDMT+ EG + +K+C E+QKRLIINLPNF V+I+ K
Sbjct: 119 MDYLAGMVKTAHATHGYGGVFSSGILDRHYKPDMTVEEGYNLLKNCIAEIQKRLIINLPNFGVQIVTK 186
BLAST of EMLSAG00000003369 vs. nr
Match: gi|321458597|gb|EFX69663.1| (hypothetical protein DAPPUDRAFT_300859 [Daphnia pulex]) HSP 1 Score: 82.0333 bits (201), Expect = 9.230e-18 Identity = 36/68 (52.94%), Postives = 49/68 (72.06%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
M+ L M+KT +++ Y G FSI I++ YRPD+T E D MK C E+QKRLIINLPNF+VK+++K
Sbjct: 118 MDYLASMIKTPFATHGYGGMFSIGIMDRYYRPDLTEQEAYDIMKKCVAEIQKRLIINLPNFQVKVLDK 185
BLAST of EMLSAG00000003369 vs. nr
Match: gi|1058060979|gb|JAS34151.1| (hypothetical protein g.8356 [Clastoptera arizonana]) HSP 1 Score: 81.2629 bits (199), Expect = 1.561e-17 Identity = 33/68 (48.53%), Postives = 50/68 (73.53%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
++ L +VK + SY Y G F++ I++ YRPDM++ EG D +K C EVQKRL++NLPNF+V++I+K
Sbjct: 118 IDYLASLVKAPYISYGYGGIFALGIMDRYYRPDMSVEEGYDILKKCVKEVQKRLLVNLPNFKVQVIDK 185
BLAST of EMLSAG00000003369 vs. nr
Match: gi|942333457|gb|JAN48661.1| (Proteasome subunit beta type-2 [Daphnia magna]) HSP 1 Score: 80.4925 bits (197), Expect = 5.410e-17 Identity = 35/68 (51.47%), Postives = 49/68 (72.06%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
M+ L M+KT +++ Y G FSI I++ YRPD+T E D +K C E+QKRLIINLPNF+VK+++K
Sbjct: 144 MDYLASMIKTPFATHGYGGMFSIGIMDRYYRPDLTEEEAYDILKKCVAEIQKRLIINLPNFQVKVLDK 211
BLAST of EMLSAG00000003369 vs. nr
Match: gi|1022757031|gb|KZS03717.1| (Proteasome subunit beta type-2 [Daphnia magna]) HSP 1 Score: 80.4925 bits (197), Expect = 5.968e-17 Identity = 35/68 (51.47%), Postives = 49/68 (72.06%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINK 68
M+ L M+KT +++ Y G FSI I++ YRPD+T E D +K C E+QKRLIINLPNF+VK+++K
Sbjct: 151 MDYLASMIKTPFATHGYGGMFSIGIMDRYYRPDLTEEEAYDILKKCVAEIQKRLIINLPNFQVKVLDK 218
BLAST of EMLSAG00000003369 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold170_size291898-snap-gene-1.56 (protein:Tk03025 transcript:maker-scaffold170_size291898-snap-gene-1.56-mRNA-1 annotation:"proteasome subunit beta type-2") HSP 1 Score: 68.9366 bits (167), Expect = 1.660e-16 Identity = 29/70 (41.43%), Postives = 47/70 (67.14%), Query Frame = 0
Query: 1 MNNLVRMVKTEHSSYDYRGTFSIDILNHNYRPDMTISEGCDHMKDCTTEVQKRLIINLPNFRVKIINKAA 70
M+ L VK ++++ Y G F+ I++ +YRPDMT +E + MK C E+ KRLIINLPNF+++ +++
Sbjct: 121 MDYLAANVKVPYAAHGYGGFFTTAIMDRDYRPDMTETEAYELMKSCIREIHKRLIINLPNFQIQKVDQGG 190 The following BLAST results are available for this feature:
BLAST of EMLSAG00000003369 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 22
Pagesback to top
BLAST of EMLSAG00000003369 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 6
BLAST of EMLSAG00000003369 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 3
BLAST of EMLSAG00000003369 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 5
BLAST of EMLSAG00000003369 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 10
BLAST of EMLSAG00000003369 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
Pagesback to top
BLAST of EMLSAG00000003369 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s184:306328..306544+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000003369-686135 ID=EMLSAG00000003369-686135|Name=EMLSAG00000003369|organism=Lepeophtheirus salmonis|type=gene|length=217bp|location=Sequence derived from alignment at LSalAtl2s184:306328..306544+ (Lepeophtheirus salmonis)back to top Add to Basket
|