EMLSAG00000003763, EMLSAG00000003763-686529 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000003763
Unique NameEMLSAG00000003763-686529
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000003763 vs. L. salmonis peptides
Match: EMLSAP00000003763 (pep:novel supercontig:LSalAtl2s:LSalAtl2s202:31159:32813:-1 gene:EMLSAG00000003763 transcript:EMLSAT00000003763 description:"snap_masked-LSalAtl2s202-processed-gene-1.6")

HSP 1 Score: 115.931 bits (289), Expect = 1.415e-35
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0 
Query:    1 MNEGDYFSSSLGANRLLLDKLDKNNILGSARRIKSSSNEFSESKSSLQLSSKEWPRVQR 59
            MNEGDYFSSSLGANRLLLDKLDKNNILGSARRIKSSSNEFSESKSSLQLSSKEWPRVQR
Sbjct:    1 MNEGDYFSSSLGANRLLLDKLDKNNILGSARRIKSSSNEFSESKSSLQLSSKEWPRVQR 59
The following BLAST results are available for this feature:
BLAST of EMLSAG00000003763 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003763 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003763 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000037631.415e-35100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s202:31159... [more]
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BLAST of EMLSAG00000003763 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003763 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003763 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003763 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s202supercontigLSalAtl2s202:31159..32813 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap_masked-LSalAtl2s202-processed-gene-1.6
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000003763 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000003763EMLSAT00000003763-699610Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s202:31159..32813-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000003763-686529 ID=EMLSAG00000003763-686529|Name=EMLSAG00000003763|organism=Lepeophtheirus salmonis|type=gene|length=1655bp|location=Sequence derived from alignment at LSalAtl2s202:31159..32813- (Lepeophtheirus salmonis)
ATGAATGTATATTTGAAAGCCAGCATTTTTTGTATATTTATCACAATCAC
ATCTCATTCACTCATTCACAGTCAGAAAAATCACACTTCTCTTTTGTTCA
ATCCTCTCTTAAAACCATAATTGGATCTTTAATGTGGTGAGTATTTTAAA
AAGGTTTTAAATAACAGAGTACTGCATTTGTCATTCGGTTTTTTATTTTT
TTCGAGAATTAAAATTAAGGAAAAGTATTTCTTCCTACATAAATTATCAT
AAATATTCATACTCCTCAAAGTACTCCAAAAAACTATATAATTTTCAAAA
TTTACAGGAAGGAGATTACTTTTCTTCAAGCCTAGGAGCGAATCGACTAT
TGCTTGACAAGCTGGACAAGAACAACATCCTTGGATCAGCGAGTGAAAAA
CGTGCTAAGCGAAAGAAAAGAGATTGGATARCGAAGGAGATGATGAGGST
GRCTATGTTGAGAATGGGCGTAATGGCTCGACTACTTCTTCTTTAATCAA
GGATGGAGAAGATGAAGAGGGACTCCAGATTGAAGAATAGTTTTTCCCTC
ATTTCCTTAAATACATTTTTGTTTTTTTTTACTTTTACAGTCTAAATATA
TATTATAAGTACATGTTGAATGTCTACCTAAAATATGTACAATTAATTGA
AACACACTTAACAACACACCCTGTATAAATATCTATCTTATGAAAGTATA
AATTTATTTACTTAACTATTATGTTTCTTTATATTGAAATATATATACAA
CTGATTATATCAGTGTTTTATTAGCGTTTAGTGAAAATACATATATAGTG
TGCCAGGTAAATGATGGACTTTTTGATAAGGAACAATAGGGGGAAATTTT
GCAAGATTGAAAATATGTACAGCATTGAGGCTTTATCACAGACTTTTTTA
TTGATACATCTTTCTATTTTTCTTTTCTTTTTCTCGGTGAAGACCTCAGA
CATGTCCGCCAACTGTTGCTCCAAAGAGGCCTTCAACAGGCTCTCTTCTT
GACTACGCCCTAAATTGCATAGTTGAGACAGGGGAACAGTTTAGGGAGGA
GGATAGGCTGTTTGTCCATTATGCTTTACCCAAGTCAATAATTTCTGGCC
TCGCCTTGGTTGTTGTTGGAAGGAGTTGCCGATGTCGTCGTACATATAAG
GCCTTCTCAAATCCTTCACATACCTCCTTACAGTCCAATTAATGATGTTG
AGAGACTTTAATGCTACCTCATCGACTTGGCCGGACTTTTGGTGGCCGCA
GTGTCCACGTCTTCCATGATCTCGATTTTATCCCTAGGGATCTTTCAAGG
CTATGACCTGAAGCTACCATGCTTCTTTATCTTGTAAACAAGACTCCTGG
AGCACTCTACGATCTAAATGGTCTCCTCGATACTCAATTGGGCGTGGAGC
AAATCAGAAACCCTTTGCCTTTTCGCCTCCATGCTGATAATTCTTGACTT
TTGAAAGTTTTTTTTATTTTCCAAAATAGTCATGAGTGGGGGTGGTTTAT
GAACACCCTCATATATCCTCTTTCTCATATGATCCCTCCTCGTTATCTGA
TTTTGTATTCTATCAGGAAGAATAAAAAGCTCATCTAATGAATTTTCTGA
ATCCAAGAGTTCGTTACAACTTTCATCGAAAGAATGGCCAAGAGTTCAGA
GATAG
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