EMLSAG00000003778, EMLSAG00000003778-686544 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000003778
Unique NameEMLSAG00000003778-686544
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000003778 vs. GO
Match: - (symbol:zgc:161969 "zgc:161969" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003656 InterPro:IPR012337 Pfam:PF02892 PROSITE:PS50808 SMART:SM00614 ZFIN:ZDB-GENE-030131-2597 GO:GO:0003677 SUPFAM:SSF53098 TreeFam:TF322818 EMBL:CR854926 EMBL:CU683898 RefSeq:XP_005168772.1 UniGene:Dr.77756 Ensembl:ENSDART00000114667 GeneID:569044 KEGG:dre:569044 GeneTree:ENSGT00530000064692 OMA:TTPQFRL OrthoDB:EOG718KCZ ArrayExpress:F1RBD5 Bgee:F1RBD5 Uniprot:F1RBD5)

HSP 1 Score: 68.5514 bits (166), Expect = 1.474e-12
Identity = 34/115 (29.57%), Postives = 60/115 (52.17%), Query Frame = 0 
Query:   10 IMVEYVVEDALPLSTVDSPAFQKLVSKIPVRPSDKLPDRKTFAKDLDKAYEAMKKELKKKNDAQVYVSVTGGIWSANKKSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTV 124
            ++  ++VED  P+S ++ P F+KL+  +        P+   F   L+ A++ MK ELK K      +  T  IWS   +S+ G+T HW++   L+R+   +AC +    +T  T+
Sbjct:  202 LVFNFIVEDVQPISILEQPGFRKLIEALSRGKRVMSPN--AFVTRLEMAFDKMKTELKAKLSKVQTLCTTADIWSVQDRSYFGMTCHWLE-DNLERRSAALACTRIPSNYTCETI 313
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BLAST of EMLSAG00000003778 vs. GO
Match: - (symbol:ZBED6 "Uncharacterized protein" species:9913 "Bos taurus" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0046983 "protein dimerization activity" evidence=IEA] InterPro:IPR003656 InterPro:IPR008906 InterPro:IPR012337 Pfam:PF02892 Pfam:PF05699 PROSITE:PS50808 SMART:SM00614 GO:GO:0005730 GO:GO:0003677 GO:GO:0000122 SUPFAM:SSF53098 TreeFam:TF322818 OrthoDB:EOG74R1QQ GeneTree:ENSGT00530000063354 CTD:100381270 OMA:KTSAVWN EMBL:DAAA02041907 RefSeq:XP_001790011.1 RefSeq:XP_003587091.1 PRIDE:G3N054 Ensembl:ENSBTAT00000063570 GeneID:100140288 KEGG:bta:100140288 NextBio:20790804 Uniprot:G3N054)

HSP 1 Score: 44.669 bits (104), Expect = 1.039e-4
Identity = 26/103 (25.24%), Postives = 54/103 (52.43%), Query Frame = 0 
Query:    4 PGDVRRIMVEYVVEDALPLSTVDSPAFQKLVSKIPVRPSDKLPDRK-TFAKDLDKAYEAMKKE--LKKKNDAQVYVSVTGGIWSANKKS-FIGVTIHWIDAGT 102
            P  + + +++ +VED  P +   +PAFQ+ +    V P  +LP     F K + + Y++++++  L  +N     + +T  IW+ +  + +  VT+HW+   T
Sbjct:  409 PSQISQAIIQMIVEDMHPYNYFSTPAFQRFLQI--VAPDYRLPSETFFFTKAVPRLYDSVREKIFLTLENVQTQKIHLTVDIWTHDPSTDYFIVTVHWVSLET 509
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BLAST of EMLSAG00000003778 vs. C. finmarchicus
Match: gi|592815123|gb|GAXK01139445.1| (TSA: Calanus finmarchicus comp4670286_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 72.4034 bits (176), Expect = 1.918e-14
Identity = 37/112 (33.04%), Postives = 65/112 (58.04%), Query Frame = 0 
Query:   19 ALPLSTVDSPAFQKLVSKIPVRPSDKLPDRKTFAKDLDKAYEAMKKELKKKNDAQVYVSVTGGIWSANK--KSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVATEL 128
             LP+S V SPAF+ LV+ +   P  ++P+RK   K+++  ++ +K  LK   D    VS+T  IW++     S++G+T+H+ +  T +R    IAC++F   HT   +A ++
Sbjct:  480 TLPVSIVSSPAFKNLVTDL--NPHARVPERKKMRKEINGIWDELKAALKSALDVARRVSITTDIWTSKNLTASYLGITVHFFNPQTRRRGAHKIACREFPNPHTGEMIADKI 809
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BLAST of EMLSAG00000003778 vs. C. finmarchicus
Match: gi|592815817|gb|GAXK01138751.1| (TSA: Calanus finmarchicus comp2540446_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 62.003 bits (149), Expect = 3.230e-11
Identity = 37/114 (32.46%), Postives = 60/114 (52.63%), Query Frame = 0 
Query:   18 DALPLSTV-DSPAFQKLVSKIPVRPSDKLPDRKTFAKDLDKAYEAMKKELKKKNDAQVYVSVTGGIWSANK--KSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVATEL 128
              LP+S + +   F+  +++I   P  KLP R    KD     E ++  +K   +    VSVT  IWS+ K   S++G+T+H  + GT+KR+   I C+KF   HT   +A ++
Sbjct:  574 SGLPISAITEDSNFKDFIAEI--NPDVKLPSRGKVMKDCSSLSEEVQARMKSAFENAKKVSVTVDIWSSTKCKNSYLGLTVHLFNHGTMKRESYRIDCRKFDCAHTGENIARKI 909
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BLAST of EMLSAG00000003778 vs. C. finmarchicus
Match: gi|592820820|gb|GAXK01133748.1| (TSA: Calanus finmarchicus comp1406333_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 57.7658 bits (138), Expect = 2.179e-9
Identity = 34/113 (30.09%), Postives = 60/113 (53.10%), Query Frame = 0 
Query:   15 VVEDALPLSTVDSPAFQKLVSKIPVRPSDKLPDRKTFAKDLDKAYEAMKKELKKKNDAQVYVSVTGGIWSAN--KKSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVA 125
            V    LP+S    PAF+KLV    + P   +P++    KD++  +E ++  L++       +++T  IWS+   K S++G+TIH+ +  +  R    IAC++F   HT   +A
Sbjct:  527 VASSTLPVSLTSLPAFKKLV--FDLNPHVLVPEQSKVKKDINDLWEKVRDALEEGIRVARKIALTTDIWSSKNMKHSYLGITIHYFNPISKVRAANKIACREFPNPHTGEAIA 859
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BLAST of EMLSAG00000003778 vs. C. finmarchicus
Match: gi|592865816|gb|GAXK01091746.1| (TSA: Calanus finmarchicus comp4233637_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 53.1434 bits (126), Expect = 5.557e-8
Identity = 29/119 (24.37%), Postives = 61/119 (51.26%), Query Frame = 0 
Query:   15 VVEDALPLSTVDSPAFQKLVSKIPVRPSDKLPDRKTFAKDLDKAYEAMKKELKKKNDAQVYVSVTGGIWSAN--KKSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVATELGDF 131
            V    LP+S    PAF++L+      P   +P++    K++D+ +E ++  ++        +++T  +W++   K S++GVT+H+ +  +  R    +AC++F   HT   +A  + D 
Sbjct:  856 VASSTLPVSLTSLPAFKRLIHD--CNPHVLVPEQTKVKKEIDELWEKVRDTIEDGIRVARRIALTSDVWTSKGMKHSYLGVTVHFFNPVSKLRSAHKVACREFPNPHTGEAIARMIVDI 1206
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BLAST of EMLSAG00000003778 vs. C. finmarchicus
Match: gi|592817666|gb|GAXK01136902.1| (TSA: Calanus finmarchicus comp4976131_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 47.7506 bits (112), Expect = 2.856e-6
Identity = 36/134 (26.87%), Postives = 66/134 (49.25%), Query Frame = 0 
Query:   11 MVEYVVEDALPLSTVDSPAFQKLVSKIPVRPSDKLPDRKTFAKDLDKAYEAMKKELKKKND----AQVYVSVTGGIWSANKKSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVATELGDFQIWAEQQSD 140
            ++  +V D  P S V+ P F    SK+ + P   +     + + LDKA+   K++++KK D    + V + + G  WS +   +IG+ +++I  G  +R ++ +AC+ F   HT   +A        W E + D
Sbjct:  495 ILTMIVTDLKPFSIVNDPGFLN-YSKL-LDPRFAVGSDMFYRRLLDKAFILGKEKVQKKFDEADPSAVSIQLDG--WSQHHHGYIGLCVNYITKG-WRRARLCLACRPFELSHTGENIAR-------WVEMECD 860
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BLAST of EMLSAG00000003778 vs. C. finmarchicus
Match: gi|592815122|gb|GAXK01139446.1| (TSA: Calanus finmarchicus comp4670286_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 46.9802 bits (110), Expect = 4.592e-6
Identity = 27/75 (36.00%), Postives = 44/75 (58.67%), Query Frame = 0 
Query:   20 LPLSTVDSPAFQKLVSKIPVRPSDKLPDRKTFAKDLDKAYEAMKKELKKKNDAQVYVSVTGGIWSANKKSFIGVT 94
            LP+S V SPAF+ LV+ +   P  ++P+RK   K+++  ++ +K  LK   D    VS+T  IW++  K+F   T
Sbjct:  562 LPVSIVSSPAFKNLVTDL--NPHARVPERKKMRKEINGIWDELKAALKSALDVARRVSITTDIWTS--KNFFQST 774
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BLAST of EMLSAG00000003778 vs. C. finmarchicus
Match: gi|592800616|gb|GAXK01153952.1| (TSA: Calanus finmarchicus comp2997744_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 45.0542 bits (105), Expect = 2.717e-5
Identity = 37/120 (30.83%), Postives = 55/120 (45.83%), Query Frame = 0 
Query:   15 VVEDALPLSTVDSPAFQKLVSKIPVRPSDKLPDRKTFAKDLDKAYEAMKKELKKK----NDAQVYVSVTGGIWSANKKSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVATELGD 130
            V+ D  P S V+ P F  L     + P  K+   K +   L K YE   K+L+ K    N   V   + G  WSA +  +IG+ +++I  G  KR  + +AC  + G HT   +   L D
Sbjct:  537 VILDLQPWSIVNDPGF--LYYSNTLDPHYKVASDKFYRGLLSKTYEKGVKKLEVKIERDNPETVCCQLDG--WSAYRHGYIGLLVNYITTG-WKRVSLCLACGPYDGHHTGENLGGWLED 881
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BLAST of EMLSAG00000003778 vs. C. finmarchicus
Match: gi|592813704|gb|GAXK01140864.1| (TSA: Calanus finmarchicus comp2670282_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 43.5134 bits (101), Expect = 5.674e-5
Identity = 38/123 (30.89%), Postives = 62/123 (50.41%), Query Frame = 0 
Query:    8 RRIMVEYVVEDALPLSTVDSPAFQKLVSKIPVRPSDKLPDRKTFAKDLDKAYEAMKKELKKKNDAQVYVSVTGGI--WSANKKSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVATEL 128
             R ++  VV D  P S V++P F  L     + P  KL     +   LDKA++   K++++K +A    SV+  +  WSA +  +IG+ I++I  G  KR  + +AC +F   HT   +   L
Sbjct:   71 HRGVLMMVVLDLQPWSIVNNPGF--LHYSYQLDPHFKLASDTFYRNLLDKAFKKSVKKVEEKIEADDPQSVSCQLDGWSAYRHGYIGLLINYITPG-WKRVSLCLACGQFDTNHTGENMGNWL 430
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BLAST of EMLSAG00000003778 vs. C. finmarchicus
Match: gi|592841799|gb|GAXK01115745.1| (TSA: Calanus finmarchicus comp4209729_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 41.2022 bits (95), Expect = 3.740e-4
Identity = 24/68 (35.29%), Postives = 37/68 (54.41%), Query Frame = 0 
Query:   60 EAMKKELKKKNDAQVYVSVTGGIWSAN--KKSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVA 125
            EA+ K LK        VS+T  +W+      SF+GVT+H+ ++ T  R    IAC++F  +HT   +A
Sbjct:    5 EAIGKALK----GARRVSITTDVWTTKGCTTSFLGVTVHFYNSETKCRGSNKIACREFSEKHTAENIA 196
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BLAST of EMLSAG00000003778 vs. C. finmarchicus
Match: gi|592901419|gb|GAXK01056956.1| (TSA: Calanus finmarchicus comp5808062_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 40.0466 bits (92), Expect = 7.000e-4
Identity = 30/108 (27.78%), Postives = 50/108 (46.30%), Query Frame = 0 
Query:   15 VVEDALPLSTVDSPAFQKLVSKIPVRPSDKLPDRKTFAKDLDKAYE--AMKKELKKKNDAQVYVSVTGGIWSANKKSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHT 120
            V+ D  P + V  P F    S++   P  K+     + + L KAY+    K + K + D  V +S     WS+ +  +IG+ +++I     KR  + +AC  F   HT
Sbjct:  204 VIMDLQPWNFVSDPGFLYFSSQM--DPHYKVASTTFYRELLGKAYKNGVTKVQEKLRRDDPVAISCQLDGWSSFRHGYIGLVVNYISP-IWKRVSLCLACSPFDDHHT 518
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BLAST of EMLSAG00000003778 vs. L. salmonis peptides
Match: EMLSAP00000003778 (pep:novel supercontig:LSalAtl2s:LSalAtl2s204:264225:264741:-1 gene:EMLSAG00000003778 transcript:EMLSAT00000003778 description:"snap_masked-LSalAtl2s204-processed-gene-2.6")

HSP 1 Score: 303.523 bits (776), Expect = 9.140e-107
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0 
Query:    1 MLKPGDVRRIMVEYVVEDALPLSTVDSPAFQKLVSKIPVRPSDKLPDRKTFAKDLDKAYEAMKKELKKKNDAQVYVSVTGGIWSANKKSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVATELGDFQIWAEQQSDCMCHR 145
            MLKPGDVRRIMVEYVVEDALPLSTVDSPAFQKLVSKIPVRPSDKLPDRKTFAKDLDKAYEAMKKELKKKNDAQVYVSVTGGIWSANKKSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVATELGDFQIWAEQQSDCMCHR
Sbjct:    1 MLKPGDVRRIMVEYVVEDALPLSTVDSPAFQKLVSKIPVRPSDKLPDRKTFAKDLDKAYEAMKKELKKKNDAQVYVSVTGGIWSANKKSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVATELGDFQIWAEQQSDCMCHR 145
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BLAST of EMLSAG00000003778 vs. L. salmonis peptides
Match: EMLSAP00000009245 (pep:novel supercontig:LSalAtl2s:LSalAtl2s589:151888:152336:-1 gene:EMLSAG00000009245 transcript:EMLSAT00000009245 description:"maker-LSalAtl2s589-snap-gene-1.16")

HSP 1 Score: 65.855 bits (159), Expect = 1.584e-14
Identity = 36/69 (52.17%), Postives = 41/69 (59.42%), Query Frame = 0 
Query:   62 MKKELKKKNDAQVYVSVTGGIWSANKKSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVATELGD 130
            M+ E KKK D Q YVSVT  IWS N K+            TLKRQK  I+CK+F GRH  N VATEL +
Sbjct:    1 MENERKKKIDTQEYVSVTAEIWSTNNKN------------TLKRQKEAISCKRFRGRHASNAVATELEN 57
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BLAST of EMLSAG00000003778 vs. L. salmonis peptides
Match: EMLSAP00000003675 (pep:novel supercontig:LSalAtl2s:LSalAtl2s19:353284:353694:1 gene:EMLSAG00000003675 transcript:EMLSAT00000003675 description:"maker-LSalAtl2s19-snap-gene-3.32")

HSP 1 Score: 64.6994 bits (156), Expect = 3.215e-14
Identity = 30/86 (34.88%), Postives = 48/86 (55.81%), Query Frame = 0 
Query:   26 DSPAFQKLVSKIPVRPSDKLPDRKTFAKDLDKAYEAMKKELKKKNDAQVYVSVTGGIWSANKKSFIGVTIHWIDAGTLKRQKVGIA 111
            DS +F  +++KI    + +L     F+  L+K Y  M+  LK   +   +VS T  IW+ N K ++G+T+HWI   TL+ QK  +A
Sbjct:    3 DSHSFHAIINKIFTINATELSQITYFSSYLEKEYAEMEINLKATRNEVNFVSTTTNIWTTNYKKYLGLTLHWISRPTLEHQKATLA 88
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BLAST of EMLSAG00000003778 vs. L. salmonis peptides
Match: EMLSAP00000012704 (pep:novel supercontig:LSalAtl2s:LSalAtl2s965:253875:254443:1 gene:EMLSAG00000012704 transcript:EMLSAT00000012704 description:"maker-LSalAtl2s965-snap-gene-2.8")

HSP 1 Score: 59.3066 bits (142), Expect = 3.138e-12
Identity = 26/40 (65.00%), Postives = 30/40 (75.00%), Query Frame = 0 
Query:   91 IGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVATELGD 130
            +GVTIH ID G+LKRQK  I  K+F GR+TYN V TEL D
Sbjct:    1 MGVTIHCIDVGSLKRQKAAIVSKRFKGRYTYNAVVTELKD 40
[Close]
BLAST of EMLSAG00000003778 vs. L. salmonis peptides
Match: EMLSAP00000008492 (pep:novel supercontig:LSalAtl2s:LSalAtl2s521:8961:10658:-1 gene:EMLSAG00000008492 transcript:EMLSAT00000008492 description:"snap_masked-LSalAtl2s521-processed-gene-0.4")

HSP 1 Score: 54.6842 bits (130), Expect = 1.205e-9
Identity = 31/107 (28.97%), Postives = 56/107 (52.34%), Query Frame = 0 
Query:    7 VRRIMVEYVVEDALPLSTVDSPAFQKLVSKIPVRPSDKLPDRKTFAKDLDKAYEAMKKELKKKNDAQVYVSVTGGIWSANKKSFIGVTIHWIDAGTLKRQKVGIACK 113
            V +++ E+++E A  L  VD+P+F  L+  I V  S  +  R+     ++  Y  M+ +L         +  T  +WSA  K+++ +T HWID  TL+R+   ++ K
Sbjct:   46 VDQLLYEFMIESAQSLDLVDNPSFINLIQTISVGKS--VLCRQDLIFKIENEYTYMRTKLDLMFQNIETICATIDMWSAFNKNYLCLTCHWIDEETLRRKSAALSLK 150
[Close]
BLAST of EMLSAG00000003778 vs. L. salmonis peptides
Match: EMLSAP00000006282 (pep:novel supercontig:LSalAtl2s:LSalAtl2s341:822354:824301:1 gene:EMLSAG00000006282 transcript:EMLSAT00000006282 description:"augustus_masked-LSalAtl2s341-processed-gene-7.6")

HSP 1 Score: 53.9138 bits (128), Expect = 2.247e-9
Identity = 40/129 (31.01%), Postives = 64/129 (49.61%), Query Frame = 0 
Query:   11 MVEYVVEDALPLSTVDSPAFQKLVSKIPVRPSDKLPDRKTFAKDLDKA-YEAMKKELKKKNDAQVYVSVTGGIWSANK-KSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVA----TELGDFQI 133
            +V+++  D +PLS V+S  FQ  VS +   P   LP RK  +  L K  YE +K  +  K      + +T  IWS  + +SF+G+T H+I +     + V + CK+ +G H    +       + DF I
Sbjct:  100 LVDFLTHDVIPLSIVESTNFQSFVSTL--DPQYVLPSRKHLSTTLLKNKYEKIKNGVMIKLRDTDSLCLTIDIWSNRQIQSFLGLTAHYI-SSQWTFESVMLRCKRVIGPHISENITLWYEETVSDFDI 225
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BLAST of EMLSAG00000003778 vs. Select Arthropod Genomes
Match: gb|EEC17883.1| (hypothetical protein IscW_ISCW021912, partial [Ixodes scapularis])

HSP 1 Score: 52.373 bits (124), Expect = 2.774e-9
Identity = 21/42 (50.00%), Postives = 29/42 (69.05%), Query Frame = 0 
Query:   89 SFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVATELGD 130
            SF GVT+HWI+  +L R+   +ACK+  GRHTY+ +A  L D
Sbjct:    1 SFSGVTVHWINPESLARESAILACKRLTGRHTYDVLAAALQD 42
[Close]
BLAST of EMLSAG00000003778 vs. nr
Match: gi|808859860|gb|KKF11949.1| (hypothetical protein EH28_18575 [Larimichthys crocea])

HSP 1 Score: 127.487 bits (319), Expect = 5.993e-33
Identity = 57/128 (44.53%), Postives = 83/128 (64.84%), Query Frame = 0 
Query:    5 GDVRRIMVEYVVEDALPLSTVDSPAFQKLVSKIPVRPSDKLPDRKTFAKDLDKAYEAMKKELKKKNDAQVYVSVTGGIWSANKKSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVATELGDFQ 132
             ++ R++  YVVE+ LP++TVDSP+F+ +VSKIP   S +LP R +F+  LDK Y  M+  LK       +VS T  IW+AN KS++GVT+HWI    L+R K  IAC++  GRHTY+ +  E+ +  
Sbjct:   13 AELTRLVGHYVVEEMLPVNTVDSPSFRAIVSKIPTSNSTELPHRTSFSSYLDKQYAMMETNLKAVLYDVDFVSTTADIWTANNKSYMGVTLHWISRAILERNKAAIACRRIRGRHTYDVIGAEIENIH 140
[Close]
BLAST of EMLSAG00000003778 vs. nr
Match: gi|808884431|gb|KKF31404.1| (putative AC9 transposase [Larimichthys crocea])

HSP 1 Score: 130.183 bits (326), Expect = 2.125e-32
Identity = 58/127 (45.67%), Postives = 90/127 (70.87%), Query Frame = 0 
Query:    6 DVRRIMVEYVVEDALPLSTVDSPAFQKLVSKIPVRPSDKLPDRKTFAKDLDKAYEAMKKELKKKNDAQVYVSVTGGIWSANKKSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVATELGDFQ 132
            ++ +++  YVVE+ LPL+TVDS +F+ L++KIP R    LP RKT +K +D  Y  M  ELKK+ +   YVS T  IW+A+ KS++GVT HWI + T++R+K  +AC++F GRHT++++A+EL +  
Sbjct:  117 ELNKMIGRYVVENMLPLTTVDSDSFRALIAKIPWRAGAGLPCRKTLSKYIDAEYVEMNVELKKELEQLEYVSTTADIWTAHNKSYLGVTAHWIHSETMERRKAALACRRFKGRHTHDSIASELDNIH 243
[Close]
BLAST of EMLSAG00000003778 vs. nr
Match: gi|939299137|ref|XP_014267560.1| (PREDICTED: uncharacterized protein LOC106676111 [Maylandia zebra] >gi|939313119|ref|XP_014262683.1| PREDICTED: uncharacterized protein LOC106674523 [Maylandia zebra] >gi|939318561|ref|XP_014264008.1| PREDICTED: uncharacterized protein LOC106674953 [Maylandia zebra])

HSP 1 Score: 129.028 bits (323), Expect = 4.493e-32
Identity = 52/127 (40.94%), Postives = 88/127 (69.29%), Query Frame = 0 
Query:    6 DVRRIMVEYVVEDALPLSTVDSPAFQKLVSKIPVRPSDKLPDRKTFAKDLDKAYEAMKKELKKKNDAQVYVSVTGGIWSANKKSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVATELGDFQ 132
            ++++++ +Y+VE+ LP++TVDSP+F+ ++ KIP   + +LP R TF   L+K +  M++ LK   +   +VS T  IW+AN +S++GVT+HWI   TL+R KV +AC++  GRHTY+ + TE+ +  
Sbjct:  102 ELKKLVAQYIVEEMLPINTVDSPSFRAIIKKIPTSVNAELPHRTTFTSYLEKEFTEMERNLKATLNEIDFVSTTADIWTANNRSYMGVTLHWISRTTLERHKVALACRRIRGRHTYDVIGTEIENIH 228
[Close]
BLAST of EMLSAG00000003778 vs. nr
Match: gi|808867002|gb|KKF17624.1| (putative AC9 transposase [Larimichthys crocea])

HSP 1 Score: 125.561 bits (314), Expect = 5.110e-31
Identity = 54/128 (42.19%), Postives = 83/128 (64.84%), Query Frame = 0 
Query:    5 GDVRRIMVEYVVEDALPLSTVDSPAFQKLVSKIPVRPSDKLPDRKTFAKDLDKAYEAMKKELKKKNDAQVYVSVTGGIWSANKKSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVATELGDFQ 132
             ++ R++  YVVE+ LP++TVDSP+F+ +V +IP     +LP R +FA  LD+ Y  M++ L+       +VS T  IW+AN KS++GVT+HW    TL+R+K  +ACK+  GRHTY+ +  E+ D  
Sbjct:   21 AELNRLVGRYVVEEMLPVNTVDSPSFRDIVRRIPTSKGTELPHRTSFASYLDREYSTMEENLRTALRDVDFVSTTADIWTANNKSYMGVTLHWFSRHTLERKKAALACKRVRGRHTYDVIGQEIEDIH 148
[Close]
BLAST of EMLSAG00000003778 vs. nr
Match: gi|1108902750|ref|XP_019113172.1| (PREDICTED: uncharacterized protein LOC109138154 [Larimichthys crocea] >gi|1108992701|ref|XP_019128426.1| PREDICTED: uncharacterized protein LOC109141648 [Larimichthys crocea])

HSP 1 Score: 125.561 bits (314), Expect = 8.190e-31
Identity = 54/128 (42.19%), Postives = 83/128 (64.84%), Query Frame = 0 
Query:    5 GDVRRIMVEYVVEDALPLSTVDSPAFQKLVSKIPVRPSDKLPDRKTFAKDLDKAYEAMKKELKKKNDAQVYVSVTGGIWSANKKSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVATELGDFQ 132
             ++ R++  YVVE+ LP++TVDSP+F+ +V +IP     +LP R +FA  LD+ Y  M++ L+       +VS T  IW+AN KS++GVT+HW    TL+R+K  +ACK+  GRHTY+ +  E+ D  
Sbjct:   96 AELNRLVGRYVVEEMLPVNTVDSPSFRDIVRRIPTSKGTELPHRTSFASYLDREYSTMEENLRTALRDVDFVSTTADIWTANNKSYMGVTLHWFSRHTLERKKAALACKRVRGRHTYDVIGQEIEDIH 223
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BLAST of EMLSAG00000003778 vs. nr
Match: gi|808883822|gb|KKF30897.1| (Nuclear factor 7, ovary [Larimichthys crocea])

HSP 1 Score: 125.176 bits (313), Expect = 1.446e-30
Identity = 54/128 (42.19%), Postives = 83/128 (64.84%), Query Frame = 0 
Query:    5 GDVRRIMVEYVVEDALPLSTVDSPAFQKLVSKIPVRPSDKLPDRKTFAKDLDKAYEAMKKELKKKNDAQVYVSVTGGIWSANKKSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVATELGDFQ 132
             ++ R++  YVVE+ LP++TVDSP+F+ +V +IP     +LP R +FA  LD+ Y  M++ L+       +VS T  IW+AN KS++GVT+HW    TL+R+K  +ACK+  GRHTY+ +  E+ D  
Sbjct:  666 AELNRLVGRYVVEEMLPVNTVDSPSFRDIVRRIPTSKGTELPHRTSFASYLDREYSTMEENLRTALRDVDFVSTTADIWTANNKSYMGVTLHWFSRHTLERKKAALACKRVRGRHTYDVIGQEIEDIH 793
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BLAST of EMLSAG00000003778 vs. nr
Match: gi|808863573|gb|KKF14879.1| (putative AC9 transposase [Larimichthys crocea])

HSP 1 Score: 124.79 bits (312), Expect = 1.688e-30
Identity = 54/128 (42.19%), Postives = 82/128 (64.06%), Query Frame = 0 
Query:    5 GDVRRIMVEYVVEDALPLSTVDSPAFQKLVSKIPVRPSDKLPDRKTFAKDLDKAYEAMKKELKKKNDAQVYVSVTGGIWSANKKSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVATELGDFQ 132
             ++ R++  YVVE+ LP++TVDSP+F+ +V +IP     +LP R +FA  LD+ Y  M++ L+       +VS T  IW+AN KS++GVT+HW    TL+R+K  +ACK   GRHTY+ +  E+ D  
Sbjct:   96 AELNRLVGRYVVEEMLPVNTVDSPSFRDIVRRIPTSKGTELPHRTSFASYLDREYSTMEENLRTALRDVDFVSTTADIWTANNKSYMGVTLHWFSRHTLERKKAALACKSVRGRHTYDVIGQEIEDIH 223
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BLAST of EMLSAG00000003778 vs. nr
Match: gi|1110951999|ref|XP_019216869.1| (PREDICTED: uncharacterized protein LOC109202836 [Oreochromis niloticus])

HSP 1 Score: 122.479 bits (306), Expect = 1.899e-30
Identity = 55/125 (44.00%), Postives = 84/125 (67.20%), Query Frame = 0 
Query:    5 GDVRRIMVEYVVEDALPLSTVDSPAFQKLVSKIPV-RPSDKLPDRKTFAKDLDKAYEAMKKELKKKNDAQVYVSVTGGIWSANKKSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVATEL 128
            G++++++  YVVE+ LPL TV+SP+F+ +++KIPV      LPDRKTF+  LDK Y  M+ ELK+  ++  Y+S T  IW+++ KSF+ +T HW D  T  R    +ACK+  GRHTY  ++ E+
Sbjct:   26 GELKKMIAGYVVEEMLPLRTVESPSFRCILNKIPVCVKKAALPDRKTFSTYLDKCYADMEMELKETFESLEYISTTANIWTSHNKSFLRMTAHWTDPSTFVRGHAALACKRVRGRHTYEVISNEI 150
[Close]
BLAST of EMLSAG00000003778 vs. nr
Match: gi|1110898743|ref|XP_019200927.1| (PREDICTED: uncharacterized protein LOC109194648 [Oreochromis niloticus])

HSP 1 Score: 121.324 bits (303), Expect = 7.740e-30
Identity = 55/116 (47.41%), Postives = 79/116 (68.10%), Query Frame = 0 
Query:   14 YVVEDALPLSTVDSPAFQKLVSKIPV-RPSDKLPDRKTFAKDLDKAYEAMKKELKKKNDAQVYVSVTGGIWSANKKSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVATEL 128
            Y+VE+ LPL TV+SP+F+ +++KIPV      LPDRKTF+  LDK Y  M+ ELK+  ++  Y+S T  IW+++ KSF+G+T HWID  T  R    +ACK+  GRHTY+ +  E+
Sbjct:    5 YIVEEMLPLRTVESPSFRCILNKIPVCGKKAALPDRKTFSTYLDKCYADMEMELKETFESLEYISTTADIWTSHNKSFLGMTAHWIDPSTFVRGHAALACKRVRGRHTYDVIGNEI 120
[Close]
BLAST of EMLSAG00000003778 vs. nr
Match: gi|930767759|ref|XP_014184954.1| (PREDICTED: uncharacterized protein LOC106632380 [Haplochromis burtoni])

HSP 1 Score: 112.464 bits (280), Expect = 5.834e-28
Identity = 50/121 (41.32%), Postives = 75/121 (61.98%), Query Frame = 0 
Query:   12 VEYVVEDALPLSTVDSPAFQKLVSKIPVRPSDKLPDRKTFAKDLDKAYEAMKKELKKKNDAQVYVSVTGGIWSANKKSFIGVTIHWIDAGTLKRQKVGIACKKFMGRHTYNTVATELGDFQ 132
             +Y+VE+ LP++TVDSP+F+ ++ KIP     +LP R TF   L+K +  M++ LK   +   +VS T  IW+AN +S +GV  HWI   TL+R KV +A  +  GRHTY+   TE+ +  
Sbjct:   87 TKYIVEEMLPINTVDSPSFRAIIKKIPTSVIAELPHRTTFVSYLEKEFTEMERNLKASLNETDFVSTTADIWTANNRSCMGVRFHWISRTTLERHKVALARSRTRGRHTYDVTGTEIENIH 207
The following BLAST results are available for this feature:
BLAST of EMLSAG00000003778 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 2
Match NameE-valueIdentityDescription
-1.474e-1229.57symbol:zgc:161969 "zgc:161969" species:7955 "Danio... [more]
-1.039e-425.24symbol:ZBED6 "Uncharacterized protein" species:991... [more]
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BLAST of EMLSAG00000003778 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 12
Match NameE-valueIdentityDescription
gi|592815123|gb|GAXK01139445.1|1.918e-1433.04TSA: Calanus finmarchicus comp4670286_c0_seq1 tran... [more]
gi|592815817|gb|GAXK01138751.1|3.230e-1132.46TSA: Calanus finmarchicus comp2540446_c0_seq1 tran... [more]
gi|592820820|gb|GAXK01133748.1|2.179e-930.09TSA: Calanus finmarchicus comp1406333_c0_seq1 tran... [more]
gi|592865816|gb|GAXK01091746.1|5.557e-824.37TSA: Calanus finmarchicus comp4233637_c0_seq1 tran... [more]
gi|592817666|gb|GAXK01136902.1|2.856e-626.87TSA: Calanus finmarchicus comp4976131_c0_seq1 tran... [more]
gi|592815122|gb|GAXK01139446.1|4.592e-636.00TSA: Calanus finmarchicus comp4670286_c0_seq2 tran... [more]
gi|592800616|gb|GAXK01153952.1|2.717e-530.83TSA: Calanus finmarchicus comp2997744_c0_seq1 tran... [more]
gi|592813704|gb|GAXK01140864.1|5.674e-530.89TSA: Calanus finmarchicus comp2670282_c0_seq1 tran... [more]
gi|592841799|gb|GAXK01115745.1|3.740e-435.29TSA: Calanus finmarchicus comp4209729_c0_seq1 tran... [more]
gi|592901419|gb|GAXK01056956.1|7.000e-427.78TSA: Calanus finmarchicus comp5808062_c0_seq1 tran... [more]

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BLAST of EMLSAG00000003778 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 6
Match NameE-valueIdentityDescription
EMLSAP000000037789.140e-107100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s204:26422... [more]
EMLSAP000000092451.584e-1452.17pep:novel supercontig:LSalAtl2s:LSalAtl2s589:15188... [more]
EMLSAP000000036753.215e-1434.88pep:novel supercontig:LSalAtl2s:LSalAtl2s19:353284... [more]
EMLSAP000000127043.138e-1265.00pep:novel supercontig:LSalAtl2s:LSalAtl2s965:25387... [more]
EMLSAP000000084921.205e-928.97pep:novel supercontig:LSalAtl2s:LSalAtl2s521:8961:... [more]
EMLSAP000000062822.247e-931.01pep:novel supercontig:LSalAtl2s:LSalAtl2s341:82235... [more]
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BLAST of EMLSAG00000003778 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003778 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 1
Match NameE-valueIdentityDescription
gb|EEC17883.1|2.774e-950.00hypothetical protein IscW_ISCW021912, partial [Ixo... [more]
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BLAST of EMLSAG00000003778 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|808859860|gb|KKF11949.1|5.993e-3344.53hypothetical protein EH28_18575 [Larimichthys croc... [more]
gi|808884431|gb|KKF31404.1|2.125e-3245.67putative AC9 transposase [Larimichthys crocea][more]
gi|939299137|ref|XP_014267560.1|4.493e-3240.94PREDICTED: uncharacterized protein LOC106676111 [M... [more]
gi|808867002|gb|KKF17624.1|5.110e-3142.19putative AC9 transposase [Larimichthys crocea][more]
gi|1108902750|ref|XP_019113172.1|8.190e-3142.19PREDICTED: uncharacterized protein LOC109138154 [L... [more]
gi|808883822|gb|KKF30897.1|1.446e-3042.19Nuclear factor 7, ovary [Larimichthys crocea][more]
gi|808863573|gb|KKF14879.1|1.688e-3042.19putative AC9 transposase [Larimichthys crocea][more]
gi|1110951999|ref|XP_019216869.1|1.899e-3044.00PREDICTED: uncharacterized protein LOC109202836 [O... [more]
gi|1110898743|ref|XP_019200927.1|7.740e-3047.41PREDICTED: uncharacterized protein LOC109194648 [O... [more]
gi|930767759|ref|XP_014184954.1|5.834e-2841.32PREDICTED: uncharacterized protein LOC106632380 [H... [more]

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BLAST of EMLSAG00000003778 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s204supercontigLSalAtl2s204:264225..264741 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap_masked-LSalAtl2s204-processed-gene-2.6
Biotypeprotein_coding
EvidenceIEA
Noteputative AC9 transposase [Larimichthys crocea]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000003778 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000003778EMLSAT00000003778-699625Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s204:264225..264741-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000003778-686544 ID=EMLSAG00000003778-686544|Name=EMLSAG00000003778|organism=Lepeophtheirus salmonis|type=gene|length=517bp|location=Sequence derived from alignment at LSalAtl2s204:264225..264741- (Lepeophtheirus salmonis)
ATGCTCAAGCCAGGAGATGTGAGAAGGATAATGGTTGAGTACGTTGTGGA
AGATGCACTGCCTCTCTCTACAGTTGATTCGCCGGCGTTTCAAAAACTTG
TAAGCAAAATCCCTGTTCGACCAAGTGACAAGGTAAAAAAAAGAGGTGAT
TCAGTGATTAAAATTTGGATGATTAATGTCTAGGTGTCCTCTTTATTTTT
CAGCTTGACAGCTACCAGACAGAAAAACATTTGCTAAAGATTTGGACAAA
GCCTATGAAGCGATGAAAAAGGAGCTCAAGAAAAAGAATGACGCCCAAGT
GTATGTGTCTGTAACAGGTGGTATATGGAGTGCCAATAAAAAAAGTTTCA
TCGGAGTGACTATTCACTGGATCGATGCAGGTACCTTAAAAAGACAGAAA
GTGGGAATAGCTTGTAAAAAATTCATGGGCAGACACACATACAATACAGT
TGCAACAGAGCTGGGGGATTTCCAGATTTGGGCTGAACAACAAAGTGACT
GCATGTGTCACAGATAA
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