EMLSAG00000004564, EMLSAG00000004564-687330 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000004564
Unique NameEMLSAG00000004564-687330
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000004564 vs. L. salmonis peptides
Match: EMLSAP00000004564 (pep:novel supercontig:LSalAtl2s:LSalAtl2s238:633602:636509:-1 gene:EMLSAG00000004564 transcript:EMLSAT00000004564 description:"maker-LSalAtl2s238-snap-gene-6.10")

HSP 1 Score: 141.354 bits (355), Expect = 2.905e-45
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 
Query:    1 MHIVTNFLLLIRNRVVKEYFQEFGSPRVCFKFNEFFIFVNSSNESQDWRPDRSTLPHQLSPPFRLDCP 68
            MHIVTNFLLLIRNRVVKEYFQEFGSPRVCFKFNEFFIFVNSSNESQDWRPDRSTLPHQLSPPFRLDCP
Sbjct:    1 MHIVTNFLLLIRNRVVKEYFQEFGSPRVCFKFNEFFIFVNSSNESQDWRPDRSTLPHQLSPPFRLDCP 68
The following BLAST results are available for this feature:
BLAST of EMLSAG00000004564 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000004564 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000004564 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000045642.905e-45100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s238:63360... [more]
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BLAST of EMLSAG00000004564 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000004564 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000004564 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000004564 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s238supercontigLSalAtl2s238:633602..636509 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s238-snap-gene-6.10
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000004564 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000004564EMLSAT00000004564-700411Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s238:633602..636509-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000004564-687330 ID=EMLSAG00000004564-687330|Name=EMLSAG00000004564|organism=Lepeophtheirus salmonis|type=gene|length=2908bp|location=Sequence derived from alignment at LSalAtl2s238:633602..636509- (Lepeophtheirus salmonis)
ATGCAGTAAATATTTATAGATAAAAAAATAAATACAGTCATACAATTTAA
TCATTTATATCTCAGTATTGTTACAAATTTCCTTTTGTTGATCCGTAATA
GAGTTGTTAAGGAATATTTCCAAGGTAACTTTAGACTTAAAACAAAATCA
ATGAGCTTTAAAGGGTAGAATTCACCAGAGGAGTTTTTCAATAGACCAAC
TCAATTTGTAGCTATAACTTCAAATCTACTGGAATTTTATTACCTTTTTA
TTTTTTCTTTTTCAATCAACACTAACATATCTAATGCATAACGAATTACA
TCTAAATCTGGCAATTATCTAATGTACAGACACCGAAGTATTGAAAAAAA
AGAGTAATCAAATTAGAAAAACCAAAAATTCATGTGATTTGTCTTAAAAT
TAATCGTTTTAAACATTTTTTTACCCTTTCTTTTAGTTGTGAAGTTTACA
AAATAAAAAAAATCATGTTTGACTGTTTGCTATTAACTTGTGACGTTAGC
ACTCTAAAAACAGACCTATAAATGTGTAATTAGTAATTTTTAAATGAAGT
GTTAATTAACTTTGAATTTGTTGTAATTCAATAAATCTATAAAATTAAGT
TGGATACTTAAGAAAATTTTTTATTTCTGTAAGATGAGAGACTTGACCAT
ACGGTCGTAACGAACTAACNATATGTAAAGATTTGTTGAAGTCGTTTTTT
AAGCGTCCATTATATACCTACATAACAAAATAGAAACGTGTACAAGTTAT
TTTTGCGTTGAATATGTAGAAAAGTATAAAATAATTAATTTATAATATTA
AATGTCAGTTGAAAACGAAGCATACACGAAAAACATCCAGTAATGTTAAA
TTACAGATGACATTTCTATTATAACATTTATTTAATATACAGTTATTATA
TTATATTATACAAATATAAGGATAGCATTGGACCTTAATATGGGACTTAA
AATTGGTCCTATTCCGCCGAGTCTCATCTCACTCCTGTCATAGTGCTTTG
AAAAAGTTCAAAATTCTAAAACGTCCTCTACAAGGTATCATATTGATTAA
TATTTTAGTTAAATATTACAGTTTATCATTTGAGTTAGTTTAATAAAACT
AGTAGTATGTTTATAACACGTTAATATTTTGCCATTATTCTTTATTCAGT
CCAAAAAAAGTCTAAATTTGGCTTTATAAAATTATGGAAGATTGATTTTT
GAGGACATCCCTGATATGATGGGCCCGTTTGTTAAAGATTGTTCTATAGA
ATGGTTTTTAAGTCTTATTAACCATAATACAATTTGTATACTCCCTGGAT
TAGCACCCATCTTTAAAATTTAGGACGGGACGGCCAAATTTTGGAATCGA
TACATATCCCTAAAAATATATGTTATAACAAAGTTGCGATAATATTACGG
AACCTTTCTTGTATTTTTGTTGAAAATTGTTTTTGCACCTTTCGTTTACC
AAAAAGTATTTTACTTTCAGTTACATGTAGCGGGCTCATTTTTGACCCTT
GTATTTTTTTCTGAACTTTGCTTGTAATTATGTGTCATATATTAAAAATT
TAATAATAATTAACTCCTTCTAATCTTTATATTATTAAAAAAATTGAGAT
CGTAATTAGAAGCTTCTTTTATTTCCAAATATAAAAAAAAACCACTAGAG
TAGGTATGCCTGGGACATTGAGAAATTAAAATTAGTTATGAACTCTTCTG
TTTTCTATAAAAAAAACTTTTTTTAAAGAATGATTCTTGCTGTATGTTGT
ATTATGTATGATTACATATTTTATCGCTATGGTCTTTGTAAAGTATAAAA
AAGTTTTTAAGGGAATTATAAAGTTTACAAAAAAAAACCCATCAAGTTGA
ATCGTTCTAATAATTTAGAGCCTTTATTTTTGTTTTATAGAAGTAGTTGT
TTGTATGTCAAATTCTTAGAAAAATGTTTTTTTAAGGCTGCCATGGCTTT
TAAGGCCATTTTTTTAGTTCACAAAAACTAGAATGACCAAATTTGAGTTT
GAAAAGAGGGTATTTCGCCTGAAGGGGGATGGGAGGTATAGCATGCCTCA
CCATGATTATGTGAATGCATAAAAATGTCACAAATGAAAGGATACAAAGG
ACTCTATATGAACATCCCTCTATTGAACTTTGACAAAATTACAAAGTTCA
GATGTAAAGCAACTGTTTTTTGTGGCATTTAAATATGTAAATAATGATAG
CGAATAAAACATTATAAATTATTTATTTACATATTAAAATAAGAAAGTTA
GGAAGCTTTTCAGTCCTCCTCATGTTGTTACCCATATTTCAATCTTACCA
AGGGCATGGCAATTACCTATGGAATAGTTATTAAAGTCCTTGCAGGTCAT
GTTTTTGAAATTTTATTGGATGTACAAAACCCTTTTCAGAGAGTCTATAG
ACACCGATTCCTCTCTTTGGGCCAGTGGGCTTGGATCAATGAAAAAAATT
GCTCGTCTTTTTCATTGGTAGCAGGTATGTAAAAAAAAACAGAAAAAAGA
ATAAGGAAAAACTGTGCAATTTTGAGCAGCTTTGAATAAAAATCTACATT
TTTGGATTTATACAAGAATTTGGTTCACCTCGGGTGTGCTTCAAGTTCAA
TGAATTCTTCATCTTTGTTAATTCTTCCAATGAATCTCAAGATTGGCGAC
CTGATCGAAGCACTTTGCCACATCAATTGTCACCCCCTTTTCGGCTAGGT
ATCTGATACACCCCTCAAAAAAATTCCAGTCCGTTATCTCACTCATACCC
ATTCAAATGAACGTGGAGAACTCTTCAATGGGCGCCATCCATCTCTCTAA
GTAACCAAGACACCCGCTGTACTGTTTACAGGCCCTGCACTTTAGCACTG
AAATTGTTACATCCTTGACCAAATCTATTCTTTTGCTTTTATATCAGATT
GCCCTTGA
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