EMLSAG00000004621, EMLSAG00000004621-687387 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000004621 vs. GO
Match: - (symbol:MAL13P1.255 "N6-adenine-specific methylase, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=RCA] InterPro:IPR004398 Pfam:PF03602 GO:GO:0008168 GO:GO:0031167 EMBL:AL844509 RefSeq:XP_002809077.1 ProteinModelPortal:C0H5I0 SMR:C0H5I0 STRING:5833.MAL13P1.255-1 EnsemblProtists:MAL13P1.255:mRNA GeneID:813816 KEGG:pfa:MAL13P1.255 EuPathDB:PlasmoDB:PF3D7_1350700 ProtClustDB:CLSZ2431660 Uniprot:C0H5I0) HSP 1 Score: 42.743 bits (99), Expect = 5.630e-4 Identity = 31/76 (40.79%), Postives = 57/76 (75.00%), Query Frame = 0 Query: 89 HSCY--DDEYNNEYKNKENNDQNNEHKNEENNDQNNEHKNEENNDQNNEHKNEENNDQNNENNNGINNEHKNEENN 162 H+ Y D ++NNE NK++++ NNE+ N++++D NNE+ N++++D NNE+ N++++D NNEN N +++H N+ N Sbjct: 142 HTGYKKDSDHNNENINKKDSNHNNENINKKDSDHNNENINKKDSDHNNENINKKDSDHNNENINKKDSDHNNDTIN 217
BLAST of EMLSAG00000004621 vs. GO
Match: - (symbol:MAL13P1.255 "hypothetical protein, conserved" species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast" evidence=RCA] InterPro:IPR004398 Pfam:PF03602 GO:GO:0008168 GO:GO:0031167 EMBL:AL844509 RefSeq:XP_002809077.1 ProteinModelPortal:C0H5I0 SMR:C0H5I0 STRING:5833.MAL13P1.255-1 EnsemblProtists:MAL13P1.255:mRNA GeneID:813816 KEGG:pfa:MAL13P1.255 EuPathDB:PlasmoDB:PF3D7_1350700 ProtClustDB:CLSZ2431660 Uniprot:C0H5I0) HSP 1 Score: 42.743 bits (99), Expect = 5.630e-4 Identity = 31/76 (40.79%), Postives = 57/76 (75.00%), Query Frame = 0 Query: 89 HSCY--DDEYNNEYKNKENNDQNNEHKNEENNDQNNEHKNEENNDQNNEHKNEENNDQNNENNNGINNEHKNEENN 162 H+ Y D ++NNE NK++++ NNE+ N++++D NNE+ N++++D NNE+ N++++D NNEN N +++H N+ N Sbjct: 142 HTGYKKDSDHNNENINKKDSNHNNENINKKDSDHNNENINKKDSDHNNENINKKDSDHNNENINKKDSDHNNDTIN 217
BLAST of EMLSAG00000004621 vs. GO
Match: - (symbol:PFB0380c "Conserved Plasmodium protein" species:36329 "Plasmodium falciparum 3D7" [GO:0008150 "biological_process" evidence=ND] EMBL:AE001362 PIR:B71616 RefSeq:XP_001349594.1 ProteinModelPortal:O96171 IntAct:O96171 MINT:MINT-1584210 EnsemblProtists:PFB0380c:mRNA GeneID:812676 KEGG:pfa:PFB0380c EuPathDB:PlasmoDB:PF3D7_0208400 Uniprot:O96171) HSP 1 Score: 42.3578 bits (98), Expect = 9.241e-4 Identity = 23/47 (48.94%), Postives = 31/47 (65.96%), Query Frame = 0 Query: 104 ENNDQNNEHKNEENNDQNNEHKNEENNDQNNEHKNEENNDQNNENNN 150 + NDQ NE K + NDQ NE KN++ NDQ N+ N++ NDQ N+ N Sbjct: 1268 QKNDQTNEQKCAQKNDQTNEQKNDQTNDQTNDQTNDQTNDQTNDQTN 1314
BLAST of EMLSAG00000004621 vs. GO
Match: - (symbol:PFB0380c "hypothetical protein" species:5833 "Plasmodium falciparum" [GO:0008150 "biological_process" evidence=ND] EMBL:AE001362 PIR:B71616 RefSeq:XP_001349594.1 ProteinModelPortal:O96171 IntAct:O96171 MINT:MINT-1584210 EnsemblProtists:PFB0380c:mRNA GeneID:812676 KEGG:pfa:PFB0380c EuPathDB:PlasmoDB:PF3D7_0208400 Uniprot:O96171) HSP 1 Score: 42.3578 bits (98), Expect = 9.241e-4 Identity = 23/47 (48.94%), Postives = 31/47 (65.96%), Query Frame = 0 Query: 104 ENNDQNNEHKNEENNDQNNEHKNEENNDQNNEHKNEENNDQNNENNN 150 + NDQ NE K + NDQ NE KN++ NDQ N+ N++ NDQ N+ N Sbjct: 1268 QKNDQTNEQKCAQKNDQTNEQKNDQTNDQTNDQTNDQTNDQTNDQTN 1314
BLAST of EMLSAG00000004621 vs. C. finmarchicus
Match: gi|592867996|gb|GAXK01089566.1| (TSA: Calanus finmarchicus comp421231_c0_seq2 transcribed RNA sequence) HSP 1 Score: 33.113 bits (74), Expect = 3.427e-1 Identity = 25/82 (30.49%), Postives = 42/82 (51.22%), Query Frame = 0 Query: 21 CKDFFKKNWCVYQKFFLKCYTSRD-TQYNCRKTCHFC----GPKCKDADIKKCKRMHKS--CSNL----MISALCKKTCHSC 91 C+D+ +C +CY +R+ CRK+C C P C+D+D K+C+R + C+++ + C+KTC SC Sbjct: 78 CEDY--NTYCEEWTRVGECYNNREYMGIYCRKSCSLCSPPPAPACQDSDAKRCERWGRKGFCTSVRYRDFVRDKCRKTCRSC 317
BLAST of EMLSAG00000004621 vs. C. finmarchicus
Match: gi|592867997|gb|GAXK01089565.1| (TSA: Calanus finmarchicus comp421231_c0_seq1 transcribed RNA sequence) HSP 1 Score: 33.113 bits (74), Expect = 3.707e-1 Identity = 25/82 (30.49%), Postives = 42/82 (51.22%), Query Frame = 0 Query: 21 CKDFFKKNWCVYQKFFLKCYTSRD-TQYNCRKTCHFC----GPKCKDADIKKCKRMHKS--CSNL----MISALCKKTCHSC 91 C+D+ +C +CY +R+ CRK+C C P C+D+D K+C+R + C+++ + C+KTC SC Sbjct: 78 CEDY--NTYCEEWTRVGECYNNREYMGIYCRKSCSLCSPPPAPACQDSDAKRCERWGRKGFCTSVRYRDFVRDKCRKTCRSC 317
BLAST of EMLSAG00000004621 vs. L. salmonis peptides
Match: EMLSAP00000004621 (pep:novel supercontig:LSalAtl2s:LSalAtl2s240:556936:558001:1 gene:EMLSAG00000004621 transcript:EMLSAT00000004621 description:"maker-LSalAtl2s240-augustus-gene-5.20") HSP 1 Score: 317.775 bits (813), Expect = 9.424e-112 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0 Query: 1 MMLIYTYFISDPIXRQYTKECKDFFKKNWCVYQKFFLKCYTSRDTQYNCRKTCHFCGPKCKDADIKKCKRMHKSCSNLMISALCKKTCHSCYDDEYNNEYKNKENNDQNNEHKNEENNDQNNEHKNEENNDQNNEHKNEENNDQNNENNNGINNEHKNEENND 163 MMLIYTYFISDPIXRQYTKECKDFFKKNWCVYQKFFLKCYTSRDTQYNCRKTCHFCGPKCKDADIKKCKRMHKSCSNLMISALCKKTCHSCYDDEYNNEYKNKENNDQNNEHKNEENNDQNNEHKNEENNDQNNEHKNEENNDQNNENNNGINNEHKNEENND Sbjct: 1 MMLIYTYFISDPIXRQYTKECKDFFKKNWCVYQKFFLKCYTSRDTQYNCRKTCHFCGPKCKDADIKKCKRMHKSCSNLMISALCKKTCHSCYDDEYNNEYKNKENNDQNNEHKNEENNDQNNEHKNEENNDQNNEHKNEENNDQNNENNNGINNEHKNEENND 163
BLAST of EMLSAG00000004621 vs. nr
Match: gi|672557753|gb|KFG99722.1| (hypothetical protein TGMAS_316635 [Toxoplasma gondii MAS]) HSP 1 Score: 75.8702 bits (185), Expect = 5.510e-13 Identity = 32/70 (45.71%), Postives = 49/70 (70.00%), Query Frame = 0 Query: 94 DEYNNEYKNKENNDQNNEHKNEENNDQNNEHKNEENNDQNNEHKNEENNDQNNENNNGINNEHKNEENND 163 +E NE +N++ N+Q NE +NE+ N+Q NE +NE+ N+Q NE +NE+ N+Q NE N NE +NE+ N+ Sbjct: 697 NEQRNEQRNEQRNEQGNEQRNEQRNEQGNEQRNEQGNEQRNEQRNEQRNEQRNEQGNEQRNEQRNEQGNE 766 HSP 2 Score: 74.7146 bits (182), Expect = 1.323e-12 Identity = 33/70 (47.14%), Postives = 47/70 (67.14%), Query Frame = 0 Query: 94 DEYNNEYKNKENNDQNNEHKNEENNDQNNEHKNEENNDQNNEHKNEENNDQNNENNNGINNEHKNEENND 163 DE NE +N++ N+Q NE NE+ N+Q NE NE+ N+Q NE +NE+ N+Q NE N NE +NE+ N+ Sbjct: 693 DEQRNEQRNEQRNEQRNEQGNEQRNEQRNEQGNEQRNEQGNEQRNEQRNEQRNEQRNEQGNEQRNEQRNE 762 HSP 3 Score: 72.7886 bits (177), Expect = 4.996e-12 Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 0 Query: 94 DEYNNEYKNKENNDQNNEHKNEENNDQNNEHKNEENNDQNNEHKNEENNDQNNENNNGINNEHKNEENND 163 +E NE N++ N+Q NE NE+ N+Q NE +NE+ N+Q NE +NE+ N+Q NE N NE +NE+ N+ Sbjct: 705 NEQRNEQGNEQRNEQRNEQGNEQRNEQGNEQRNEQRNEQRNEQRNEQGNEQRNEQRNEQGNEQRNEQGNE 774 HSP 4 Score: 72.7886 bits (177), Expect = 5.045e-12 Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 0 Query: 94 DEYNNEYKNKENNDQNNEHKNEENNDQNNEHKNEENNDQNNEHKNEENNDQNNENNNGINNEHKNEENND 163 +E NE +N++ N+Q NE +NE+ N+Q NE NE+ N+Q NE +NE+ N+Q NE N NE NE+ N+ Sbjct: 701 NEQRNEQRNEQGNEQRNEQRNEQGNEQRNEQGNEQRNEQRNEQRNEQRNEQGNEQRNEQRNEQGNEQRNE 770 HSP 5 Score: 70.4774 bits (171), Expect = 3.732e-11 Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 0 Query: 94 DEYNNEYKNKENNDQNNEHKNEENNDQNNEHKNEENNDQNNEHKNEENNDQNNENNNGINNEHKNEE 160 +E NE +N++ N+Q NE +NE+ N+Q NE +NE+ N+Q NE NE+ N+Q NE N NE NE+ Sbjct: 709 NEQGNEQRNEQRNEQGNEQRNEQGNEQRNEQRNEQRNEQRNEQGNEQRNEQRNEQGNEQRNEQGNEQ 775 HSP 6 Score: 70.0922 bits (170), Expect = 5.175e-11 Identity = 33/72 (45.83%), Postives = 48/72 (66.67%), Query Frame = 0 Query: 94 DEYN--NEYKNKENNDQNNEHKNEENNDQNNEHKNEENNDQNNEHKNEENNDQNNENNNGINNEHKNEENND 163 DE N +E +N++ N+Q NE +NE+ N+Q NE +NE+ N+Q NE NE+ N+Q NE N NE NE+ N+ Sbjct: 687 DEENRRDEQRNEQRNEQRNEQRNEQGNEQRNEQRNEQGNEQRNEQGNEQRNEQRNEQRNEQRNEQGNEQRNE 758 HSP 7 Score: 68.9366 bits (167), Expect = 1.230e-10 Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 0 Query: 94 DEYNNEYKNKENNDQNNEHKNEENNDQNNEHKNEENNDQNNEHKNEENNDQNNENNNGINNEH-KNEENND 163 +E NE +N++ N+Q NE NE+ N+Q NE +NE+ N+Q NE +NE+ N+Q NE N NE K EE D Sbjct: 713 NEQRNEQRNEQGNEQRNEQGNEQRNEQRNEQRNEQRNEQGNEQRNEQRNEQGNEQRNEQGNEQRKREEQGD 783 HSP 8 Score: 63.1586 bits (152), Expect = 1.155e-8 Identity = 25/63 (39.68%), Postives = 43/63 (68.25%), Query Frame = 0 Query: 101 KNKENNDQNNEHKNEENNDQNNEHKNEENNDQNNEHKNEENNDQNNENNNGINNEHKNEENND 163 + ++ ++ +E +NE+ N+Q NE +NE+ N+Q NE +NE+ N+Q NE N NE +NE+ N+ Sbjct: 684 RGRDEENRRDEQRNEQRNEQRNEQRNEQGNEQRNEQRNEQGNEQRNEQGNEQRNEQRNEQRNE 746
BLAST of EMLSAG00000004621 vs. nr
Match: gi|672560632|gb|KFH01914.1| (hypothetical protein TGVAND_316635A, partial [Toxoplasma gondii VAND]) HSP 1 Score: 71.2478 bits (173), Expect = 2.007e-11 Identity = 33/70 (47.14%), Postives = 46/70 (65.71%), Query Frame = 0 Query: 94 DEYNNEYKNKENNDQNNEHKNEENNDQNNEHKNEENNDQNNEHKNEENNDQNNENNNGINNEHKNEENND 163 DE NE +N++ N+Q NE NE+ N+Q NE NE+ N+Q NE NE+ N+Q NE N NE +NE+ N+ Sbjct: 760 DEQRNEQRNEQRNEQRNEQGNEQRNEQGNEQGNEQRNEQGNEQGNEQRNEQRNEQGNEQGNEQENEQGNE 829 HSP 2 Score: 70.4774 bits (171), Expect = 4.209e-11 Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 0 Query: 94 DEYNNEYKNKENNDQNNEHKNEENNDQNNEHKNEENNDQNNEHKNEENNDQNNENNNGINNEHKNEE 160 +E NE +N++ N+Q NE +NE+ N+Q NE +NE+ N+Q NE +NE+ N+Q NE N NE NE+ Sbjct: 764 NEQRNEQRNEQRNEQGNEQRNEQGNEQGNEQRNEQGNEQGNEQRNEQRNEQGNEQGNEQENEQGNEQ 830 HSP 3 Score: 67.0106 bits (162), Expect = 5.125e-10 Identity = 33/72 (45.83%), Postives = 47/72 (65.28%), Query Frame = 0 Query: 94 DEYN--NEYKNKENNDQNNEHKNEENNDQNNEHKNEENNDQNNEHKNEENNDQNNENNNGINNEHKNEENND 163 DE N +E +N++ N+Q NE +NE+ N+Q NE NE+ N+Q NE NE+ N+Q NE N NE NE+ N+ Sbjct: 754 DEENRRDEQRNEQRNEQRNEQRNEQGNEQRNEQGNEQGNEQRNEQGNEQGNEQRNEQRNEQGNEQGNEQENE 825 HSP 4 Score: 66.2402 bits (160), Expect = 1.182e-9 Identity = 30/67 (44.78%), Postives = 43/67 (64.18%), Query Frame = 0 Query: 94 DEYNNEYKNKENNDQNNEHKNEENNDQNNEHKNEENNDQNNEHKNEENNDQNNENNNGINNEHKNEE 160 +E NE +N++ N+Q NE NE+ N+Q NE NE+ N+Q NE +NE+ N+Q NE N NE + E Sbjct: 768 NEQRNEQRNEQGNEQRNEQGNEQGNEQRNEQGNEQGNEQRNEQRNEQGNEQGNEQENEQGNEQRKRE 834 HSP 5 Score: 60.4622 bits (145), Expect = 1.013e-7 Identity = 25/63 (39.68%), Postives = 42/63 (66.67%), Query Frame = 0 Query: 101 KNKENNDQNNEHKNEENNDQNNEHKNEENNDQNNEHKNEENNDQNNENNNGINNEHKNEENND 163 + ++ ++ +E +NE+ N+Q NE +NE+ N+Q NE NE+ N+Q NE N NE +NE+ N+ Sbjct: 751 RGRDEENRRDEQRNEQRNEQRNEQRNEQGNEQRNEQGNEQGNEQRNEQGNEQGNEQRNEQRNE 813
BLAST of EMLSAG00000004621 vs. nr
Match: gi|1008947548|gb|KYK65575.1| (hypothetical protein TGPRC2_316635A, partial [Toxoplasma gondii TgCatPRC2]) HSP 1 Score: 69.707 bits (169), Expect = 6.866e-11 Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 0 Query: 94 DEYNNEYKNKENNDQNNEHKNEENNDQNNEHKNEENNDQNNEHKNEENNDQNNENNNGINNEHKNEE 160 DE NE N++ N+Q NE NE+ N+Q NE +NE+ N+Q NE +NE+ N+Q NE N NE NE+ Sbjct: 760 DEQGNEQGNEQRNEQGNEQGNEQRNEQGNEQRNEQRNEQGNEQRNEQGNEQGNEQGNEQENEQGNEQ 826 HSP 2 Score: 67.781 bits (164), Expect = 2.989e-10 Identity = 30/67 (44.78%), Postives = 44/67 (65.67%), Query Frame = 0 Query: 94 DEYNNEYKNKENNDQNNEHKNEENNDQNNEHKNEENNDQNNEHKNEENNDQNNENNNGINNEHKNEE 160 +E NE +N++ N+Q NE +NE+ N+Q NE +NE+ N+Q NE NE+ N+Q NE N NE + E Sbjct: 764 NEQGNEQRNEQGNEQGNEQRNEQGNEQRNEQRNEQGNEQRNEQGNEQGNEQGNEQENEQGNEQRKRE 830 HSP 3 Score: 66.6254 bits (161), Expect = 7.165e-10 Identity = 31/70 (44.29%), Postives = 47/70 (67.14%), Query Frame = 0 Query: 94 DEYNNEYKNKENNDQNNEHKNEENNDQNNEHKNEENNDQNNEHKNEENNDQNNENNNGINNEHKNEENND 163 DE N ++++ N+Q NE +NE+ N+Q NE +NE+ N+Q NE +NE+ N+Q NE N NE NE+ N+ Sbjct: 754 DEENR--RDEQGNEQGNEQRNEQGNEQGNEQRNEQGNEQRNEQRNEQGNEQRNEQGNEQGNEQGNEQENE 821 The following BLAST results are available for this feature:
BLAST of EMLSAG00000004621 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 4
BLAST of EMLSAG00000004621 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 2
BLAST of EMLSAG00000004621 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000004621 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000004621 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000004621 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 3
BLAST of EMLSAG00000004621 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s240:556936..558001+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000004621-687387 ID=EMLSAG00000004621-687387|Name=EMLSAG00000004621|organism=Lepeophtheirus salmonis|type=gene|length=1066bp|location=Sequence derived from alignment at LSalAtl2s240:556936..558001+ (Lepeophtheirus salmonis)back to top Add to Basket
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