EMLSAG00000004927, EMLSAG00000004927-687693 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000004927 vs. C. finmarchicus
Match: gi|592784791|gb|GAXK01169777.1| (TSA: Calanus finmarchicus comp282_c0_seq1 transcribed RNA sequence) HSP 1 Score: 55.0694 bits (131), Expect = 9.740e-10 Identity = 25/80 (31.25%), Postives = 51/80 (63.75%), Query Frame = 0 Query: 1 MIPEGEGKGI---DYDLERNPIIPETKLELVLVSTNISDKYKGIVILDLFHGRLRGQRMLNNIVSIDMIPLNSRFPWIFG 77 ++ G KG+ D D+ + + ++ L+L+LV +++D+ +GIV+ +L HG L G+ +L+++VS+ ++PL W+ G Sbjct: 248 LVSGGADKGVHLGDVDVVQ---LLDSGLDLMLVGLDVADEDQGIVVFNLLHGGLGGEWVLDDVVSVHLVPLGGGLTWVLG 478
BLAST of EMLSAG00000004927 vs. C. finmarchicus
Match: gi|592785983|gb|GAXK01168585.1| (TSA: Calanus finmarchicus comp1901_c0_seq1 transcribed RNA sequence) HSP 1 Score: 45.8246 bits (107), Expect = 7.542e-7 Identity = 24/73 (32.88%), Postives = 46/73 (63.01%), Query Frame = 0 Query: 1 MIPEGEGKGI---DYDLERNPIIPETKLELVLVSTNISDKYKGIVILDLFHGRLRGQRMLNNIVSIDMIPLNS 70 ++P G +G+ D D+ + + + L+ VLV N++D+ + +V+LDL HGRL + +L+++V I ++PL Sbjct: 2 LVPGGPHQGVHLRDVDVVQ---LLNSGLDHVLVGFNVADEDQCVVVLDLLHGRLGSEGVLDDVVGIHLVPLGG 211
BLAST of EMLSAG00000004927 vs. C. finmarchicus
Match: gi|592871757|gb|GAXK01085805.1| (TSA: Calanus finmarchicus comp78650_c1_seq1 transcribed RNA sequence) HSP 1 Score: 31.5722 bits (70), Expect = 2.633e-1 Identity = 10/24 (41.67%), Postives = 17/24 (70.83%), Query Frame = 0 Query: 52 RGQRMLNNIVSIDMIPLNSRFPWI 75 RG++ N V + ++P+N RFPW+ Sbjct: 656 RGKQFENGDVVVTLLPVNERFPWV 727
BLAST of EMLSAG00000004927 vs. C. finmarchicus
Match: gi|592856828|gb|GAXK01100716.1| (TSA: Calanus finmarchicus comp7015_c1_seq6 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 1.320e+0 Identity = 27/75 (36.00%), Postives = 38/75 (50.67%), Query Frame = 0 Query: 14 LERNPIIPETKLELVLVSTNISDKYKGIVILDL-----FHGRLRGQRML-NNIVSIDMIPLNSRFPWIFGISELT 82 LE P++ T +EL L+ N+SDKY G+V L + F L G R+L +V D PL + GI +L Sbjct: 761 LESFPVLHVTGIELALIG-NLSDKYFGVVNLSVLIESSFLFFLNGNRVLFTGVVCPD--PLLGVLGIVLGILDLV 976
BLAST of EMLSAG00000004927 vs. C. finmarchicus
Match: gi|592856829|gb|GAXK01100715.1| (TSA: Calanus finmarchicus comp7015_c1_seq5 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 1.322e+0 Identity = 27/75 (36.00%), Postives = 38/75 (50.67%), Query Frame = 0 Query: 14 LERNPIIPETKLELVLVSTNISDKYKGIVILDL-----FHGRLRGQRML-NNIVSIDMIPLNSRFPWIFGISELT 82 LE P++ T +EL L+ N+SDKY G+V L + F L G R+L +V D PL + GI +L Sbjct: 761 LESFPVLHVTGIELALIG-NLSDKYFGVVNLSVLIESSFLFFLNGNRVLFTGVVCPD--PLLGVLGIVLGILDLV 976
BLAST of EMLSAG00000004927 vs. C. finmarchicus
Match: gi|592856830|gb|GAXK01100714.1| (TSA: Calanus finmarchicus comp7015_c1_seq4 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 1.337e+0 Identity = 27/75 (36.00%), Postives = 38/75 (50.67%), Query Frame = 0 Query: 14 LERNPIIPETKLELVLVSTNISDKYKGIVILDL-----FHGRLRGQRML-NNIVSIDMIPLNSRFPWIFGISELT 82 LE P++ T +EL L+ N+SDKY G+V L + F L G R+L +V D PL + GI +L Sbjct: 1187 LESFPVLHVTGIELALIG-NLSDKYFGVVNLSVLIESSFLFFLNGNRVLFTGVVCPD--PLLGVLGIVLGILDLV 1402
BLAST of EMLSAG00000004927 vs. C. finmarchicus
Match: gi|592856831|gb|GAXK01100713.1| (TSA: Calanus finmarchicus comp7015_c1_seq3 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 1.338e+0 Identity = 27/75 (36.00%), Postives = 38/75 (50.67%), Query Frame = 0 Query: 14 LERNPIIPETKLELVLVSTNISDKYKGIVILDL-----FHGRLRGQRML-NNIVSIDMIPLNSRFPWIFGISELT 82 LE P++ T +EL L+ N+SDKY G+V L + F L G R+L +V D PL + GI +L Sbjct: 1187 LESFPVLHVTGIELALIG-NLSDKYFGVVNLSVLIESSFLFFLNGNRVLFTGVVCPD--PLLGVLGIVLGILDLV 1402
BLAST of EMLSAG00000004927 vs. C. finmarchicus
Match: gi|592856832|gb|GAXK01100712.1| (TSA: Calanus finmarchicus comp7015_c1_seq2 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 1.339e+0 Identity = 27/75 (36.00%), Postives = 38/75 (50.67%), Query Frame = 0 Query: 14 LERNPIIPETKLELVLVSTNISDKYKGIVILDL-----FHGRLRGQRML-NNIVSIDMIPLNSRFPWIFGISELT 82 LE P++ T +EL L+ N+SDKY G+V L + F L G R+L +V D PL + GI +L Sbjct: 1256 LESFPVLHVTGIELALIG-NLSDKYFGVVNLSVLIESSFLFFLNGNRVLFTGVVCPD--PLLGVLGIVLGILDLV 1471
BLAST of EMLSAG00000004927 vs. C. finmarchicus
Match: gi|592856833|gb|GAXK01100711.1| (TSA: Calanus finmarchicus comp7015_c1_seq1 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 1.340e+0 Identity = 27/75 (36.00%), Postives = 38/75 (50.67%), Query Frame = 0 Query: 14 LERNPIIPETKLELVLVSTNISDKYKGIVILDL-----FHGRLRGQRML-NNIVSIDMIPLNSRFPWIFGISELT 82 LE P++ T +EL L+ N+SDKY G+V L + F L G R+L +V D PL + GI +L Sbjct: 1256 LESFPVLHVTGIELALIG-NLSDKYFGVVNLSVLIESSFLFFLNGNRVLFTGVVCPD--PLLGVLGIVLGILDLV 1471
BLAST of EMLSAG00000004927 vs. C. finmarchicus
Match: gi|592856834|gb|GAXK01100710.1| (TSA: Calanus finmarchicus comp7015_c0_seq6 transcribed RNA sequence) HSP 1 Score: 27.7202 bits (60), Expect = 6.147e+0 Identity = 20/49 (40.82%), Postives = 28/49 (57.14%), Query Frame = 0 Query: 14 LERNPIIPETKLELVLVSTNISDKYKGIVILDL-----FHGRLRGQRML 57 L+ PI+ T +EL L+ N+SDKY G+V L + F L G R+L Sbjct: 927 LKSFPILHVTGIELALIG-NLSDKYFGVVNLSVLIESSFLFFLNGNRVL 1070
BLAST of EMLSAG00000004927 vs. L. salmonis peptides
Match: EMLSAP00000004927 (pep:novel supercontig:LSalAtl2s:LSalAtl2s259:299536:306244:-1 gene:EMLSAG00000004927 transcript:EMLSAT00000004927 description:"maker-LSalAtl2s259-snap-gene-3.10") HSP 1 Score: 189.119 bits (479), Expect = 2.883e-63 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 Query: 1 MIPEGEGKGIDYDLERNPIIPETKLELVLVSTNISDKYKGIVILDLFHGRLRGQRMLNNIVSIDMIPLNSRFPWIFGISELTLPYCYRLNKDS 93 MIPEGEGKGIDYDLERNPIIPETKLELVLVSTNISDKYKGIVILDLFHGRLRGQRMLNNIVSIDMIPLNSRFPWIFGISELTLPYCYRLNKDS Sbjct: 1 MIPEGEGKGIDYDLERNPIIPETKLELVLVSTNISDKYKGIVILDLFHGRLRGQRMLNNIVSIDMIPLNSRFPWIFGISELTLPYCYRLNKDS 93 The following BLAST results are available for this feature:
BLAST of EMLSAG00000004927 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000004927 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 15
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BLAST of EMLSAG00000004927 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000004927 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000004927 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000004927 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000004927 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s259:299536..306244- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000004927-687693 ID=EMLSAG00000004927-687693|Name=EMLSAG00000004927|organism=Lepeophtheirus salmonis|type=gene|length=6709bp|location=Sequence derived from alignment at LSalAtl2s259:299536..306244- (Lepeophtheirus salmonis)back to top Add to Basket
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