EMLSAG00000005394, EMLSAG00000005394-688160 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000005394
Unique Name	EMLSAG00000005394-688160
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000005394 vs. GO
Match: - (symbol:VPS36 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0005764 "lysosome" evidence=IEA] [GO:0005770 "late endosome" evidence=IEA] [GO:0032266 "phosphatidylinositol-3-phosphate binding" evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA] InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005764 GO:GO:0005770 GO:GO:0032266 InterPro:IPR007286 Pfam:PF04157 GeneTree:ENSGT00390000017209 OrthoDB:EOG7VB2FM TreeFam:TF314770 EMBL:AADN03000670 Ensembl:ENSGALT00000027510 Uniprot:F1P5B8)

HSP 1 Score: 56.9954 bits (136), Expect = 4.181e-9
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 0

Query:    6 VPLILKNFDYGLSVF-INNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFK 82
            +PL L+ FD G+ V  + + N E++    L    E   LT D+ A+L+ +S  L ++ L  AEK G LC DDSV+G +
Sbjct:  299 LPLRLQIFDSGVMVIELQSHNEEEMVASALETVSEKGSLTADEFAKLVGMSVLLAKERLLLAEKMGHLCRDDSVEGLR 376

[Close]

BLAST of EMLSAG00000005394 vs. GO
Match: - (symbol:VPS36 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0005764 "lysosome" evidence=IEA] [GO:0005770 "late endosome" evidence=IEA] [GO:0032266 "phosphatidylinositol-3-phosphate binding" evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA] InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005764 GO:GO:0005770 GO:GO:0032266 InterPro:IPR007286 Pfam:PF04157 KO:K12190 OMA:CCIAIPL CTD:51028 GeneTree:ENSGT00390000017209 OrthoDB:EOG7VB2FM TreeFam:TF314770 EMBL:CU856639 RefSeq:XP_003130995.1 UniGene:Ssc.11728 Ensembl:ENSSSCT00000010273 GeneID:100513172 KEGG:ssc:100513172 Uniprot:F1RMD6)

HSP 1 Score: 53.9138 bits (128), Expect = 4.159e-8
Identity = 28/78 (35.90%), Postives = 44/78 (56.41%), Query Frame = 0

Query:    6 VPLILKNFDYGLSVF-INNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFK 82
            +PL L+ FD G+ V  + +   E++    L    E   LT ++ A+L+ +S  L ++ L  AEK G LC DDSV+G +
Sbjct:  299 LPLRLRVFDSGVMVIELQSHKEEEMVASALETVSEKGSLTSEEFAKLVGMSVLLAKERLLLAEKMGHLCRDDSVEGLR 376

[Close]

BLAST of EMLSAG00000005394 vs. GO
Match: - (symbol:VPS36 "Vacuolar protein-sorting-associated protein 36" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA] [GO:0005768 "endosome" evidence=IDA] [GO:0005770 "late endosome" evidence=IEA] [GO:0005829 "cytosol" evidence=TAS] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0015031 "protein transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016197 "endosomal transport" evidence=TAS] [GO:0032266 "phosphatidylinositol-3-phosphate binding" evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0061024 "membrane organization" evidence=TAS] [GO:0070062 "extracellular vesicular exosome" evidence=IDA] Reactome:REACT_11123 InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495 GO:GO:0005829 GO:GO:0005634 GO:GO:0070062 GO:GO:0016020 GO:GO:0006355 GO:GO:0015031 GO:GO:0005768 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0005764 GO:GO:0016197 GO:GO:0005770 GO:GO:0032266 EMBL:AL359513 InterPro:IPR007286 Pfam:PF04157 PDB:2ZME PDB:3CUQ PDBsum:2ZME PDBsum:3CUQ EMBL:CH471274 PDB:2HTH PDBsum:2HTH eggNOG:NOG262969 KO:K12190 OMA:CCIAIPL CTD:51028 HOVERGEN:HBG083632 OrthoDB:EOG7VB2FM EMBL:AF151903 EMBL:AK023182 EMBL:AK289740 EMBL:CR933653 EMBL:BC037279 EMBL:BC050439 RefSeq:NP_001269098.1 RefSeq:NP_057159.2 UniGene:Hs.109520 ProteinModelPortal:Q86VN1 SMR:Q86VN1 BioGrid:119234 DIP:DIP-29249N IntAct:Q86VN1 MINT:MINT-3085996 STRING:9606.ENSP00000367299 PhosphoSite:Q86VN1 DMDM:73920464 PaxDb:Q86VN1 PRIDE:Q86VN1 DNASU:51028 Ensembl:ENST00000378060 GeneID:51028 KEGG:hsa:51028 UCSC:uc001vgq.3 GeneCards:GC13M052986 HGNC:HGNC:20312 HPA:HPA039734 HPA:HPA043947 MIM:610903 neXtProt:NX_Q86VN1 PharmGKB:PA134990943 InParanoid:Q86VN1 PhylomeDB:Q86VN1 TreeFam:TF314770 ChiTaRS:VPS36 EvolutionaryTrace:Q86VN1 GeneWiki:VPS36 GenomeRNAi:51028 NextBio:53573 PRO:PR:Q86VN1 Bgee:Q86VN1 CleanEx:HS_VPS36 Genevestigator:Q86VN1 Uniprot:Q86VN1)

HSP 1 Score: 53.9138 bits (128), Expect = 4.568e-8
Identity = 28/78 (35.90%), Postives = 44/78 (56.41%), Query Frame = 0

Query:    6 VPLILKNFDYGLSVF-INNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFK 82
            +PL L+ FD G+ V  + +   E++    L    E   LT ++ A+L+ +S  L ++ L  AEK G LC DDSV+G +
Sbjct:  299 LPLRLRVFDSGVMVIELQSHKEEEMVASALETVSEKGSLTSEEFAKLVGMSVLLAKERLLLAEKMGHLCRDDSVEGLR 376

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BLAST of EMLSAG00000005394 vs. GO
Match: - (symbol:VPS36 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0005764 "lysosome" evidence=IEA] [GO:0005770 "late endosome" evidence=IEA] [GO:0032266 "phosphatidylinositol-3-phosphate binding" evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA] InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005764 GO:GO:0005770 GO:GO:0032266 InterPro:IPR007286 Pfam:PF04157 KO:K12190 OMA:CCIAIPL CTD:51028 GeneTree:ENSGT00390000017209 OrthoDB:EOG7VB2FM TreeFam:TF314770 RefSeq:XP_534484.2 ProteinModelPortal:E2QV84 Ensembl:ENSCAFT00000009588 GeneID:477292 KEGG:cfa:477292 NextBio:20852810 Uniprot:E2QV84)

HSP 1 Score: 53.9138 bits (128), Expect = 4.611e-8
Identity = 28/78 (35.90%), Postives = 44/78 (56.41%), Query Frame = 0

Query:    6 VPLILKNFDYGLSVF-INNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFK 82
            +PL L+ FD G+ V  + +   E++    L    E   LT ++ A+L+ +S  L ++ L  AEK G LC DDSV+G +
Sbjct:  299 LPLRLRVFDSGVMVIELQSHKEEEMVASALETVSEKGSLTSEEFAKLVGMSVLLAKERLLLAEKMGHLCRDDSVEGLR 376

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BLAST of EMLSAG00000005394 vs. GO
Match: - (symbol:VPS36 "Vacuolar protein-sorting-associated protein 36" species:9913 "Bos taurus" [GO:0005764 "lysosome" evidence=IEA] [GO:0005770 "late endosome" evidence=IEA] [GO:0032266 "phosphatidylinositol-3-phosphate binding" evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA] InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005764 GO:GO:0005770 GO:GO:0032266 InterPro:IPR007286 Pfam:PF04157 OMA:CCIAIPL GeneTree:ENSGT00390000017209 OrthoDB:EOG7VB2FM TreeFam:TF314770 EMBL:DAAA02032965 Ensembl:ENSBTAT00000005646 Uniprot:F1MT69)

HSP 1 Score: 53.9138 bits (128), Expect = 4.611e-8
Identity = 28/78 (35.90%), Postives = 44/78 (56.41%), Query Frame = 0

Query:    6 VPLILKNFDYGLSVF-INNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFK 82
            +PL L+ FD G+ V  + +   E++    L    E   LT ++ A+L+ +S  L ++ L  AEK G LC DDSV+G +
Sbjct:  299 LPLRLRVFDSGVMVIELQSHKEEEMVASALETVSEKGSLTSEEFAKLVGMSVLLAKERLLLAEKMGHLCRDDSVEGLR 376

[Close]

BLAST of EMLSAG00000005394 vs. GO
Match: - (symbol:VPS36 "Vacuolar protein-sorting-associated protein 36" species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005768 "endosome" evidence=ISS] [GO:0005770 "late endosome" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0015031 "protein transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0032266 "phosphatidylinositol-3-phosphate binding" evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA] InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495 GO:GO:0005634 GO:GO:0016020 GO:GO:0006355 GO:GO:0015031 GO:GO:0005768 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0005770 GO:GO:0032266 InterPro:IPR007286 Pfam:PF04157 eggNOG:NOG262969 HOGENOM:HOG000006822 KO:K12190 EMBL:BC142301 RefSeq:NP_001092409.1 UniGene:Bt.17824 ProteinModelPortal:A5PK00 SMR:A5PK00 STRING:9913.ENSBTAP00000005646 GeneID:511223 KEGG:bta:511223 CTD:51028 InParanoid:A5PK00 NextBio:20869830 Uniprot:A5PK00)

HSP 1 Score: 53.1434 bits (126), Expect = 7.431e-8
Identity = 28/78 (35.90%), Postives = 44/78 (56.41%), Query Frame = 0

Query:    6 VPLILKNFDYGLSVF-INNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFK 82
            +PL L+ FD G+ V  + +   E++    L    E   LT ++ A+L+ +S  L ++ L  AEK G LC DDSV+G +
Sbjct:  299 LPLRLRVFDSGVMVIELQSHKEEEMVASALETVSEKGSLTSEEFAKLMGMSVLLAKERLLLAEKMGHLCRDDSVEGLR 376

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BLAST of EMLSAG00000005394 vs. GO
Match: - (symbol:Vps36 "vacuolar protein sorting 36 (yeast)" species:10090 "Mus musculus" [GO:0005622 "intracellular" evidence=IC] [GO:0005623 "cell" evidence=IC] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005764 "lysosome" evidence=IDA] [GO:0005768 "endosome" evidence=ISO] [GO:0005770 "late endosome" evidence=IDA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0015031 "protein transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016197 "endosomal transport" evidence=IC] [GO:0032266 "phosphatidylinositol-3-phosphate binding" evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0070062 "extracellular vesicular exosome" evidence=ISO] InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495 MGI:MGI:1917410 GO:GO:0005634 GO:GO:0016020 GO:GO:0006355 GO:GO:0015031 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0005764 GO:GO:0016197 GO:GO:0005770 GO:GO:0043130 GO:GO:0032266 InterPro:IPR007286 Pfam:PF04157 PDB:2DX5 PDBsum:2DX5 eggNOG:NOG262969 HOGENOM:HOG000006822 KO:K12190 OMA:CCIAIPL CTD:51028 HOVERGEN:HBG083632 GeneTree:ENSGT00390000017209 OrthoDB:EOG7VB2FM TreeFam:TF314770 EMBL:BC010811 EMBL:AK008946 RefSeq:NP_081614.1 UniGene:Mm.41453 ProteinModelPortal:Q91XD6 SMR:Q91XD6 BioGrid:213894 DIP:DIP-29247N IntAct:Q91XD6 MINT:MINT-4121697 PhosphoSite:Q91XD6 PaxDb:Q91XD6 PRIDE:Q91XD6 Ensembl:ENSMUST00000033866 GeneID:70160 KEGG:mmu:70160 UCSC:uc009lct.1 InParanoid:Q91XD6 EvolutionaryTrace:Q91XD6 NextBio:331106 PRO:PR:Q91XD6 ArrayExpress:Q91XD6 Bgee:Q91XD6 CleanEx:MM_VPS36 Genevestigator:Q91XD6 Uniprot:Q91XD6)

HSP 1 Score: 52.7582 bits (125), Expect = 9.926e-8
Identity = 27/78 (34.62%), Postives = 43/78 (55.13%), Query Frame = 0

Query:    6 VPLILKNFDYGLSVF-INNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFK 82
            +P+ L+ FD G+ V  +     E++    L    E   LT ++ A+L+ +S  L ++ L  AEK G LC DDSV+G +
Sbjct:  299 LPIRLRVFDSGVMVIELQTHKEEEMVASALETVSERGSLTSEEFAKLVGMSVLLAKERLLLAEKMGHLCRDDSVEGLR 376

[Close]

BLAST of EMLSAG00000005394 vs. GO
Match: - (symbol:Vps36 "Vacuolar protein-sorting-associated protein 36" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005768 "endosome" evidence=ISS] [GO:0005770 "late endosome" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0015031 "protein transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0032266 "phosphatidylinositol-3-phosphate binding" evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA] InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495 RGD:1309754 GO:GO:0005634 GO:GO:0016020 GO:GO:0006355 GO:GO:0015031 GO:GO:0005768 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0005770 GO:GO:0032266 InterPro:IPR007286 Pfam:PF04157 eggNOG:NOG262969 HOGENOM:HOG000006822 HOVERGEN:HBG083632 EMBL:AABR03100673 EMBL:AABR03103040 EMBL:AABR03103985 UniGene:Rn.12707 ProteinModelPortal:P0C0A2 SMR:P0C0A2 PaxDb:P0C0A2 PRIDE:P0C0A2 InParanoid:P0C0A2 PRO:PR:P0C0A2 Genevestigator:P0C0A2 Uniprot:P0C0A2)

HSP 1 Score: 52.373 bits (124), Expect = 1.363e-7
Identity = 28/88 (31.82%), Postives = 45/88 (51.14%), Query Frame = 0

Query:    6 VPLILKNFDYGLSVF-INNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFKMIGSWLSNHN 92
            +P+ L+ FD G+ V  +     E++    L    E   LT ++ A+L+ +S  L ++ L  AEK G LC DDSV+G +   +     N
Sbjct:  299 LPVRLRVFDSGVMVIELQTHKEEEMVASALETVSERGSLTSEEFAKLVGMSVLLAKERLLLAEKMGHLCRDDSVEGLRFYPNLFMTQN 386

[Close]

BLAST of EMLSAG00000005394 vs. GO
Match: - (symbol:Vps36 "vacuolar protein sorting 36 homolog (S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA;ISO] [GO:0005768 "endosome" evidence=ISO;ISS] [GO:0005770 "late endosome" evidence=IEA;ISO] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0015031 "protein transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0032266 "phosphatidylinositol-3-phosphate binding" evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA;ISO] [GO:0070062 "extracellular vesicular exosome" evidence=ISO] InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495 RGD:1309754 GO:GO:0005634 GO:GO:0016020 GO:GO:0006355 GO:GO:0015031 GO:GO:0005768 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0005770 GO:GO:0032266 InterPro:IPR007286 Pfam:PF04157 eggNOG:NOG262969 HOGENOM:HOG000006822 HOVERGEN:HBG083632 EMBL:AABR03100673 EMBL:AABR03103040 EMBL:AABR03103985 UniGene:Rn.12707 ProteinModelPortal:P0C0A2 SMR:P0C0A2 PaxDb:P0C0A2 PRIDE:P0C0A2 InParanoid:P0C0A2 PRO:PR:P0C0A2 Genevestigator:P0C0A2 Uniprot:P0C0A2)

HSP 1 Score: 52.373 bits (124), Expect = 1.363e-7
Identity = 28/88 (31.82%), Postives = 45/88 (51.14%), Query Frame = 0

Query:    6 VPLILKNFDYGLSVF-INNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFKMIGSWLSNHN 92
            +P+ L+ FD G+ V  +     E++    L    E   LT ++ A+L+ +S  L ++ L  AEK G LC DDSV+G +   +     N
Sbjct:  299 LPVRLRVFDSGVMVIELQTHKEEEMVASALETVSERGSLTSEEFAKLVGMSVLLAKERLLLAEKMGHLCRDDSVEGLRFYPNLFMTQN 386

[Close]

BLAST of EMLSAG00000005394 vs. GO
Match: - (symbol:vps36 "Vacuolar protein-sorting-associated protein 36" species:8355 "Xenopus laevis" [GO:0005768 "endosome" evidence=ISS] InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495 GO:GO:0015031 GO:GO:0005768 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0032266 InterPro:IPR007286 Pfam:PF04157 KO:K12190 CTD:51028 HOVERGEN:HBG083632 EMBL:BC077615 RefSeq:NP_001086892.1 UniGene:Xl.48240 ProteinModelPortal:Q6DDF4 SMR:Q6DDF4 PRIDE:Q6DDF4 GeneID:446727 KEGG:xla:446727 Xenbase:XB-GENE-6255362 Uniprot:Q6DDF4)

HSP 1 Score: 50.447 bits (119), Expect = 6.702e-7
Identity = 26/78 (33.33%), Postives = 44/78 (56.41%), Query Frame = 0

Query:    6 VPLILKNFDYGLSVFIN-NQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFK 82
            +P+ L+ FD G+ V  + + N E++    L    E   LT ++ A+++ +S  L ++ L  AE  G LC DDSV+G +
Sbjct:  301 LPIRLRVFDSGVMVIEHQSHNEEEMVASALETVSEKGSLTSEEFAKIVGMSVLLAKERLLLAENMGHLCRDDSVEGLR 378

[Close]

BLAST of EMLSAG00000005394 vs. C. finmarchicus
Match: gi|592839111|gb|GAXK01118433.1| (TSA: Calanus finmarchicus comp124687_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 52.373 bits (124), Expect = 5.233e-8
Identity = 25/83 (30.12%), Postives = 50/83 (60.24%), Query Frame = 0

Query:    1 MRQAGVPLILKNFDYGLSVF-INNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFK 82
            ++   +P+ L  FD G+ V   +N + E+++++ ++  +     TP++++  + LS  L ++ L +AE  GLLC DDSV+G +
Sbjct:  887 LKDVSLPMSLHTFDSGVMVLRTSNHSEEEVKQNLMNQLESVGSFTPEEMSTNLGLSVILAKERLLSAESEGLLCRDDSVEGLR 1135

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BLAST of EMLSAG00000005394 vs. C. finmarchicus
Match: gi|592818167|gb|GAXK01136401.1| (TSA: Calanus finmarchicus comp1843650_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 29.261 bits (64), Expect = 3.679e+0
Identity = 22/95 (23.16%), Postives = 39/95 (41.05%), Query Frame = 0

Query:   15 YGLSVFINNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKA--------GLLCHDDSVDGFKMIGSWLSNHNSMSSAAIRF 101
            YGLS++++++  ED ++    LS+ N   T   L + I  S      +    E           +LC ++ +  F  IG W    +      I+F
Sbjct: 1237 YGLSLYLHSEREEDKKRLHKMLSERNEIKTDVMLDQEIKPSVKYKLTMKLGEESKEISYDMSYKILCKNNGIKSFGAIGRWFDPPDCKEVMQIQF 1521

[Close]

BLAST of EMLSAG00000005394 vs. C. finmarchicus
Match: gi|592754078|gb|GAXK01200335.1| (TSA: Calanus finmarchicus comp306242_c7_seq9 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 4.722e+0
Identity = 12/20 (60.00%), Postives = 15/20 (75.00%), Query Frame = 0

Query:   22 NNQNTEDIQKDTLSLSKENT 41
            NNQ+ EDIQKD  +L + NT
Sbjct: 1966 NNQSPEDIQKDVSTLHENNT 2025

[Close]

BLAST of EMLSAG00000005394 vs. C. finmarchicus
Match: gi|592754079|gb|GAXK01200334.1| (TSA: Calanus finmarchicus comp306242_c7_seq8 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 4.722e+0
Identity = 12/20 (60.00%), Postives = 15/20 (75.00%), Query Frame = 0

Query:   22 NNQNTEDIQKDTLSLSKENT 41
            NNQ+ EDIQKD  +L + NT
Sbjct: 1972 NNQSPEDIQKDVSTLHENNT 2031

[Close]

BLAST of EMLSAG00000005394 vs. C. finmarchicus
Match: gi|592754080|gb|GAXK01200333.1| (TSA: Calanus finmarchicus comp306242_c7_seq7 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 4.723e+0
Identity = 12/20 (60.00%), Postives = 15/20 (75.00%), Query Frame = 0

Query:   22 NNQNTEDIQKDTLSLSKENT 41
            NNQ+ EDIQKD  +L + NT
Sbjct: 1987 NNQSPEDIQKDVSTLHENNT 2046

[Close]

BLAST of EMLSAG00000005394 vs. C. finmarchicus
Match: gi|592754083|gb|GAXK01200330.1| (TSA: Calanus finmarchicus comp306242_c7_seq4 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 4.761e+0
Identity = 12/20 (60.00%), Postives = 15/20 (75.00%), Query Frame = 0

Query:   22 NNQNTEDIQKDTLSLSKENT 41
            NNQ+ EDIQKD  +L + NT
Sbjct: 2756 NNQSPEDIQKDVSTLHENNT 2815

[Close]

BLAST of EMLSAG00000005394 vs. C. finmarchicus
Match: gi|592754085|gb|GAXK01200328.1| (TSA: Calanus finmarchicus comp306242_c7_seq2 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 4.761e+0
Identity = 12/20 (60.00%), Postives = 15/20 (75.00%), Query Frame = 0

Query:   22 NNQNTEDIQKDTLSLSKENT 41
            NNQ+ EDIQKD  +L + NT
Sbjct: 2762 NNQSPEDIQKDVSTLHENNT 2821

[Close]

BLAST of EMLSAG00000005394 vs. C. finmarchicus
Match: gi|592754086|gb|GAXK01200327.1| (TSA: Calanus finmarchicus comp306242_c7_seq1 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 4.762e+0
Identity = 12/20 (60.00%), Postives = 15/20 (75.00%), Query Frame = 0

Query:   22 NNQNTEDIQKDTLSLSKENT 41
            NNQ+ EDIQKD  +L + NT
Sbjct: 2777 NNQSPEDIQKDVSTLHENNT 2836

[Close]

BLAST of EMLSAG00000005394 vs. L. salmonis peptides
Match: EMLSAP00000005394 (pep:novel supercontig:LSalAtl2s:LSalAtl2s290:1069728:1071450:-1 gene:EMLSAG00000005394 transcript:EMLSAT00000005394 description:"maker-LSalAtl2s290-snap-gene-9.24")

HSP 1 Score: 239.58 bits (610), Expect = 1.767e-82
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0

Query:    1 MRQAGVPLILKNFDYGLSVFINNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFKMIGSWLSNHNSMSSAAIRFLVVVVYAESEVAYY 115
            MRQAGVPLILKNFDYGLSVFINNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFKMIGSWLSNHNSMSSAAIRFLVVVVYAESEVAYY
Sbjct:    1 MRQAGVPLILKNFDYGLSVFINNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFKMIGSWLSNHNSMSSAAIRFLVVVVYAESEVAYY 115

[Close]

BLAST of EMLSAG00000005394 vs. L. salmonis peptides
Match: EMLSAP00000012278 (pep:novel supercontig:LSalAtl2s:LSalAtl2s896:683938:689935:1 gene:EMLSAG00000012278 transcript:EMLSAT00000012278 description:"maker-LSalAtl2s896-augustus-gene-6.22")

HSP 1 Score: 135.191 bits (339), Expect = 1.192e-38
Identity = 64/82 (78.05%), Postives = 72/82 (87.80%), Query Frame = 0

Query:    1 MRQAGVPLILKNFDYGLSVFINNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFK 82
            M+QAGVPLILK FD GLSV +NN+NTEDIQKDTLSL KENTCLTPD+L+RLIALS  L R+ LF+AEKAGLLC DDSV+G K
Sbjct:  324 MKQAGVPLILKTFDSGLSVLVNNENTEDIQKDTLSLVKENTCLTPDELSRLIALSVVLSRERLFSAEKAGLLCRDDSVEGLK 405

[Close]

BLAST of EMLSAG00000005394 vs. SwissProt
Match: gi|73920464|sp|Q86VN1.1|VPS36_HUMAN (RecName: Full=Vacuolar protein-sorting-associated protein 36; AltName: Full=ELL-associated protein of 45 kDa; AltName: Full=ESCRT-II complex subunit VPS36)

HSP 1 Score: 53.9138 bits (128), Expect = 1.804e-8
Identity = 28/78 (35.90%), Postives = 44/78 (56.41%), Query Frame = 0

Query:    6 VPLILKNFDYGLSVF-INNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFK 82
            +PL L+ FD G+ V  + +   E++    L    E   LT ++ A+L+ +S  L ++ L  AEK G LC DDSV+G +
Sbjct:  299 LPLRLRVFDSGVMVIELQSHKEEEMVASALETVSEKGSLTSEEFAKLVGMSVLLAKERLLLAEKMGHLCRDDSVEGLR 376

[Close]

BLAST of EMLSAG00000005394 vs. SwissProt
Match: gi|257096848|sp|A5PK00.1|VPS36_BOVIN (RecName: Full=Vacuolar protein-sorting-associated protein 36; AltName: Full=ESCRT-II complex subunit VPS36)

HSP 1 Score: 53.1434 bits (126), Expect = 2.990e-8
Identity = 28/78 (35.90%), Postives = 44/78 (56.41%), Query Frame = 0

Query:    6 VPLILKNFDYGLSVF-INNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFK 82
            +PL L+ FD G+ V  + +   E++    L    E   LT ++ A+L+ +S  L ++ L  AEK G LC DDSV+G +
Sbjct:  299 LPLRLRVFDSGVMVIELQSHKEEEMVASALETVSEKGSLTSEEFAKLMGMSVLLAKERLLLAEKMGHLCRDDSVEGLR 376

[Close]

BLAST of EMLSAG00000005394 vs. SwissProt
Match: gi|73920465|sp|Q91XD6.1|VPS36_MOUSE (RecName: Full=Vacuolar protein-sorting-associated protein 36; AltName: Full=ESCRT-II complex subunit VPS36)

HSP 1 Score: 52.7582 bits (125), Expect = 4.040e-8
Identity = 27/78 (34.62%), Postives = 43/78 (55.13%), Query Frame = 0

Query:    6 VPLILKNFDYGLSVF-INNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFK 82
            +P+ L+ FD G+ V  +     E++    L    E   LT ++ A+L+ +S  L ++ L  AEK G LC DDSV+G +
Sbjct:  299 LPIRLRVFDSGVMVIELQTHKEEEMVASALETVSERGSLTSEEFAKLVGMSVLLAKERLLLAEKMGHLCRDDSVEGLR 376

[Close]

BLAST of EMLSAG00000005394 vs. SwissProt
Match: gi|73920466|sp|P0C0A2.1|VPS36_RAT (RecName: Full=Vacuolar protein-sorting-associated protein 36; AltName: Full=ELL-associated protein of 45 kDa; AltName: Full=ESCRT-II complex subunit VPS36)

HSP 1 Score: 52.373 bits (124), Expect = 5.621e-8
Identity = 28/88 (31.82%), Postives = 45/88 (51.14%), Query Frame = 0

Query:    6 VPLILKNFDYGLSVF-INNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFKMIGSWLSNHN 92
            +P+ L+ FD G+ V  +     E++    L    E   LT ++ A+L+ +S  L ++ L  AEK G LC DDSV+G +   +     N
Sbjct:  299 LPVRLRVFDSGVMVIELQTHKEEEMVASALETVSERGSLTSEEFAKLVGMSVLLAKERLLLAEKMGHLCRDDSVEGLRFYPNLFMTQN 386

[Close]

BLAST of EMLSAG00000005394 vs. SwissProt
Match: gi|73920467|sp|Q6DDF4.1|VPS36_XENLA (RecName: Full=Vacuolar protein-sorting-associated protein 36; AltName: Full=ESCRT-II complex subunit VPS36)

HSP 1 Score: 50.447 bits (119), Expect = 2.960e-7
Identity = 26/78 (33.33%), Postives = 44/78 (56.41%), Query Frame = 0

Query:    6 VPLILKNFDYGLSVFIN-NQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFK 82
            +P+ L+ FD G+ V  + + N E++    L    E   LT ++ A+++ +S  L ++ L  AE  G LC DDSV+G +
Sbjct:  301 LPIRLRVFDSGVMVIEHQSHNEEEMVASALETVSEKGSLTSEEFAKIVGMSVLLAKERLLLAENMGHLCRDDSVEGLR 378

[Close]

BLAST of EMLSAG00000005394 vs. SwissProt
Match: gi|73920463|sp|Q7ZVK4.1|VPS36_DANRE (RecName: Full=Vacuolar protein-sorting-associated protein 36; AltName: Full=ESCRT-II complex subunit VPS36)

HSP 1 Score: 50.0618 bits (118), Expect = 3.515e-7
Identity = 28/78 (35.90%), Postives = 45/78 (57.69%), Query Frame = 0

Query:    6 VPLILKNFDYGLSVF-INNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFK 82
            +PL L+ FD G+ V  + + + E++    L    +   LT ++ A+L+ LS  L ++ L  AEK G LC DDSV+G +
Sbjct:  299 LPLRLRVFDSGVMVVQLQSHSEEEMIASALDNVSDKGSLTAEEFAKLLGLSVLLAKERLLLAEKMGHLCRDDSVEGLR 376

[Close]

BLAST of EMLSAG00000005394 vs. Select Arthropod Genomes
Match: EAL39436.2 (AGAP004755-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 55.4546 bits (132), Expect = 2.067e-9
Identity = 30/77 (38.96%), Postives = 46/77 (59.74%), Query Frame = 0

Query:    7 PLILKNFDYGLSVF-INNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFK 82
            P+ L+ F  G  V  + + +   I + TL L ++N  ++PD+LARL  +S  L R+ L TAE  G LC D+SV+G +
Sbjct:  312 PIKLREFPSGAIVLQLESHDDALISQRTLELVEQNVSMSPDELARLECISLLLARERLLTAEGFGQLCRDESVEGLR 388

[Close]

BLAST of EMLSAG00000005394 vs. Select Arthropod Genomes
Match: gb|EEC16642.1| (vacuolar protein-sorting protein, putative [Ixodes scapularis])

HSP 1 Score: 48.9062 bits (115), Expect = 3.982e-7
Identity = 28/83 (33.73%), Postives = 46/83 (55.42%), Query Frame = 0

Query:    1 MRQAGVPLILKNFDYGLSVF-INNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFK 82
            M    +PL L+ F  G++V  +  Q+ E +  +T  L  E+  L+ + L+ LI +   L ++ L +AE  GL C DDSV+G +
Sbjct:  263 MEALDLPLRLQVFPSGVTVLRLATQSDEKLAAETRQLLDEHGSLSAEDLSPLIEIPVILAKERLLSAESEGLACRDDSVEGLR 345

[Close]

BLAST of EMLSAG00000005394 vs. nr
Match: gi|290561228|gb|ADD38016.1| (Vacuolar protein-sorting-associated protein 36 [Lepeophtheirus salmonis])

HSP 1 Score: 135.191 bits (339), Expect = 6.099e-36
Identity = 64/82 (78.05%), Postives = 72/82 (87.80%), Query Frame = 0

Query:    1 MRQAGVPLILKNFDYGLSVFINNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFK 82
            M+QAGVPLILK FD GLSV +NN+NTEDIQKDTLSL KENTCLTPD+L+RLIALS  L R+ LF+AEKAGLLC DDSV+G K
Sbjct:  289 MKQAGVPLILKTFDSGLSVLVNNENTEDIQKDTLSLVKENTCLTPDELSRLIALSVVLSRERLFSAEKAGLLCRDDSVEGLK 370

[Close]

BLAST of EMLSAG00000005394 vs. nr
Match: gi|290462183|gb|ADD24139.1| (Vacuolar protein-sorting-associated protein 36 [Lepeophtheirus salmonis])

HSP 1 Score: 135.191 bits (339), Expect = 6.296e-36
Identity = 64/82 (78.05%), Postives = 72/82 (87.80%), Query Frame = 0

Query:    1 MRQAGVPLILKNFDYGLSVFINNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFK 82
            M+QAGVPLILK FD GLSV +NN+NTEDIQKDTLSL KENTCLTPD+L+RLIALS  L R+ LF+AEKAGLLC DDSV+G K
Sbjct:  289 MKQAGVPLILKTFDSGLSVLVNNENTEDIQKDTLSLVKENTCLTPDELSRLIALSVVLSRERLFSAEKAGLLCRDDSVEGLK 370

[Close]

BLAST of EMLSAG00000005394 vs. nr
Match: gi|225719352|gb|ACO15522.1| (Vacuolar protein-sorting-associated protein 36 [Caligus clemensi])

HSP 1 Score: 94.7449 bits (234), Expect = 9.547e-21
Identity = 46/82 (56.10%), Postives = 62/82 (75.61%), Query Frame = 0

Query:    1 MRQAGVPLILKNFDYGLSVFINNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFK 82
            M +A VPL LK FD GLSV + N + ED QKDTL+L +++T L+ ++L+RLI+LS  L R+ L +AE+AGLLC DDSV+G K
Sbjct:  289 MAEAKVPLTLKRFDSGLSVLVINDDIEDTQKDTLALVEKHTSLSSEELSRLISLSVVLSRERLLSAERAGLLCRDDSVEGLK 370

[Close]

BLAST of EMLSAG00000005394 vs. nr
Match: gi|930659853|gb|KPJ01895.1| (Vacuolar protein-sorting-associated protein 36 [Papilio xuthus])

HSP 1 Score: 64.3142 bits (155), Expect = 9.234e-10
Identity = 32/82 (39.02%), Postives = 50/82 (60.98%), Query Frame = 0

Query:    1 MRQAGVPLILKNFDYGLSVF-INNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGF 81
            ++  G P+ L+ F  G  V  +N+Q  E++ + T  L +EN  LTP KL++L  +S  L R+ LFT E+ GL C D+S++G 
Sbjct:  308 LQTIGAPMSLRKFPSGACVLQLNSQRDEEVARSTSQLREENGTLTPVKLSQLANVSVLLARERLFTTERLGLACRDESIEGL 389

[Close]

BLAST of EMLSAG00000005394 vs. nr
Match: gi|910342783|ref|XP_013175132.1| (PREDICTED: vacuolar protein-sorting-associated protein 36 [Papilio xuthus])

HSP 1 Score: 64.3142 bits (155), Expect = 1.018e-9
Identity = 33/82 (40.24%), Postives = 50/82 (60.98%), Query Frame = 0

Query:    1 MRQAGVPLILKNFDYGLSVF-INNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGF 81
            ++  G P+ L+ F  G  V  +N+Q  E++ K T  L +EN  LTP KL++L  +S  L R+ LFT E+ GL C D+S++G 
Sbjct:  308 LQTIGAPMSLRKFPSGACVLQLNSQRDEEVAKSTSQLLEENGTLTPVKLSQLANVSVLLARERLFTTERLGLACRDESIEGL 389

[Close]

BLAST of EMLSAG00000005394 vs. nr
Match: gi|512913115|ref|XP_004927818.1| (PREDICTED: vacuolar protein-sorting-associated protein 36 [Bombyx mori])

HSP 1 Score: 61.6178 bits (148), Expect = 7.452e-9
Identity = 31/82 (37.80%), Postives = 49/82 (59.76%), Query Frame = 0

Query:    1 MRQAGVPLILKNFDYGLSVF-INNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGF 81
            +R    P+ L+ F  G  V  +N+   E+I K T  + +EN  LTP+KL+++  +S  L R+ LFT E+ GL C D+S++G 
Sbjct:  309 LRTVDAPMSLRKFPSGACVLQLNSNRDEEIAKSTSDMIQENGYLTPEKLSQIANVSVLLARERLFTTERLGLACRDESIEGL 390

[Close]

BLAST of EMLSAG00000005394 vs. nr
Match: gi|943958216|ref|XP_014361823.1| (PREDICTED: vacuolar protein-sorting-associated protein 36 [Papilio machaon] >gi|930671873|gb|KPJ12567.1| Vacuolar protein-sorting-associated protein 36 [Papilio machaon])

HSP 1 Score: 61.6178 bits (148), Expect = 8.056e-9
Identity = 31/82 (37.80%), Postives = 50/82 (60.98%), Query Frame = 0

Query:    1 MRQAGVPLILKNFDYGLSVF-INNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGF 81
            ++  G P+ L+ F  G  V  +N+Q  E++ + T  L +EN  LTP KL++L  +S  L R+ L+T E+ GL C D+S++G 
Sbjct:  308 LQSIGAPMSLRKFPSGACVLQLNSQRDEEVARSTSQLLEENGNLTPVKLSQLANVSVLLARERLYTTERLGLACRDESIEGL 389

[Close]

BLAST of EMLSAG00000005394 vs. nr
Match: gi|1126223967|ref|XP_019646312.1| (PREDICTED: vacuolar protein-sorting-associated protein 36-like [Branchiostoma belcheri])

HSP 1 Score: 61.2326 bits (147), Expect = 1.145e-8
Identity = 31/90 (34.44%), Postives = 54/90 (60.00%), Query Frame = 0

Query:    6 VPLILKNFDYGLSVF-INNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGFKMIGSWLSNHNSM 94
            +P+ L+ FD G+ V  + + + E++ ++T  L +E+  LT ++L+R+ + S  L R+ L T EK GLLC DD+V+G +   +  S    M
Sbjct:  300 LPMRLREFDSGVVVVQLVSHSEEEVVRETSRLVEESGSLTAEELSRVASFSVMLARERLLTTEKKGLLCRDDTVEGLRFYPNLFSTKPVM 389

[Close]

BLAST of EMLSAG00000005394 vs. nr
Match: gi|913310099|ref|XP_013185669.1| (PREDICTED: vacuolar protein-sorting-associated protein 36 [Amyelois transitella])

HSP 1 Score: 60.8474 bits (146), Expect = 1.671e-8
Identity = 30/82 (36.59%), Postives = 50/82 (60.98%), Query Frame = 0

Query:    1 MRQAGVPLILKNFDYGLSVF-INNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGF 81
            ++  G P+ ++ F  G  V  +N+   E++ K T  L +EN  LTP KL+++ ++S  L R+ LFT E+ GL C D+S++G 
Sbjct:  307 LQTIGAPMSMRKFPSGACVLQLNSHRDEEVAKTTSQLLEENGFLTPVKLSQIASVSVLLARERLFTTERLGLACRDESIEGL 388

[Close]

BLAST of EMLSAG00000005394 vs. nr
Match: gi|909560254|ref|XP_013135211.1| (PREDICTED: vacuolar protein-sorting-associated protein 36 [Papilio polytes])

HSP 1 Score: 60.077 bits (144), Expect = 2.420e-8
Identity = 31/76 (40.79%), Postives = 47/76 (61.84%), Query Frame = 0

Query:    7 PLILKNFDYGLSVF-INNQNTEDIQKDTLSLSKENTCLTPDKLARLIALSAGLPRQILFTAEKAGLLCHDDSVDGF 81
            P+ L+ F  G  V  +N+Q  E++ + T  L +EN  LTP KL++L  +S  L R+ LFT E+ GL C D+S++G 
Sbjct:  314 PMSLRKFPSGACVLQLNSQRDEEVARSTSQLLEENGTLTPVKLSQLANVSLLLARERLFTTERLGLACRDESIEGL 389

The following BLAST results are available for this feature:

BLAST of EMLSAG00000005394 vs. GO
BLAST of EMLSAG00000005394 vs. C. finmarchicus
BLAST of EMLSAG00000005394 vs. L. salmonis peptides
BLAST of EMLSAG00000005394 vs. SwissProt
BLAST of EMLSAG00000005394 vs. Select Arthropod Genomes
BLAST of EMLSAG00000005394 vs. nr
BLAST of EMLSAG00000005394 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000005394 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 12


Match Name	E-value	Identity	Description
-	4.181e-9	38.46	symbol:VPS36 "Uncharacterized protein" species:903...	[more]
-	4.159e-8	35.90	symbol:VPS36 "Uncharacterized protein" species:982...	[more]
-	4.568e-8	35.90	symbol:VPS36 "Vacuolar protein-sorting-associated ...	[more]
-	4.611e-8	35.90	symbol:VPS36 "Uncharacterized protein" species:961...	[more]
-	4.611e-8	35.90	symbol:VPS36 "Vacuolar protein-sorting-associated ...	[more]
-	7.431e-8	35.90	symbol:VPS36 "Vacuolar protein-sorting-associated ...	[more]
-	9.926e-8	34.62	symbol:Vps36 "vacuolar protein sorting 36 (yeast)"...	[more]
-	1.363e-7	31.82	symbol:Vps36 "Vacuolar protein-sorting-associated ...	[more]
-	1.363e-7	31.82	symbol:Vps36 "vacuolar protein sorting 36 homolog ...	[more]
-	6.702e-7	33.33	symbol:vps36 "Vacuolar protein-sorting-associated ...	[more]

Pages

BLAST of EMLSAG00000005394 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 8


Match Name	E-value	Identity	Description
gi\|592839111\|gb\|GAXK01118433.1\|	5.233e-8	30.12	TSA: Calanus finmarchicus comp124687_c0_seq1 trans...	[more]
gi\|592818167\|gb\|GAXK01136401.1\|	3.679e+0	23.16	TSA: Calanus finmarchicus comp1843650_c0_seq1 tran...	[more]
gi\|592754078\|gb\|GAXK01200335.1\|	4.722e+0	60.00	TSA: Calanus finmarchicus comp306242_c7_seq9 trans...	[more]
gi\|592754079\|gb\|GAXK01200334.1\|	4.722e+0	60.00	TSA: Calanus finmarchicus comp306242_c7_seq8 trans...	[more]
gi\|592754080\|gb\|GAXK01200333.1\|	4.723e+0	60.00	TSA: Calanus finmarchicus comp306242_c7_seq7 trans...	[more]
gi\|592754083\|gb\|GAXK01200330.1\|	4.761e+0	60.00	TSA: Calanus finmarchicus comp306242_c7_seq4 trans...	[more]
gi\|592754085\|gb\|GAXK01200328.1\|	4.761e+0	60.00	TSA: Calanus finmarchicus comp306242_c7_seq2 trans...	[more]
gi\|592754086\|gb\|GAXK01200327.1\|	4.762e+0	60.00	TSA: Calanus finmarchicus comp306242_c7_seq1 trans...	[more]

BLAST of EMLSAG00000005394 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 2


Match Name	E-value	Identity	Description
EMLSAP00000005394	1.767e-82	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s290:10697...	[more]
EMLSAP00000012278	1.192e-38	78.05	pep:novel supercontig:LSalAtl2s:LSalAtl2s896:68393...	[more]

BLAST of EMLSAG00000005394 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 6


Match Name	E-value	Identity	Description
gi\|73920464\|sp\|Q86VN1.1\|VPS36_HUMAN	1.804e-8	35.90	RecName: Full=Vacuolar protein-sorting-associated ...	[more]
gi\|257096848\|sp\|A5PK00.1\|VPS36_BOVIN	2.990e-8	35.90	RecName: Full=Vacuolar protein-sorting-associated ...	[more]
gi\|73920465\|sp\|Q91XD6.1\|VPS36_MOUSE	4.040e-8	34.62	RecName: Full=Vacuolar protein-sorting-associated ...	[more]
gi\|73920466\|sp\|P0C0A2.1\|VPS36_RAT	5.621e-8	31.82	RecName: Full=Vacuolar protein-sorting-associated ...	[more]
gi\|73920467\|sp\|Q6DDF4.1\|VPS36_XENLA	2.960e-7	33.33	RecName: Full=Vacuolar protein-sorting-associated ...	[more]
gi\|73920463\|sp\|Q7ZVK4.1\|VPS36_DANRE	3.515e-7	35.90	RecName: Full=Vacuolar protein-sorting-associated ...	[more]

BLAST of EMLSAG00000005394 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 2


Match Name	E-value	Identity	Description
EAL39436.2	2.067e-9	38.96	AGAP004755-PA [Anopheles gambiae str. PEST]	[more]
gb\|EEC16642.1\|	3.982e-7	33.73	vacuolar protein-sorting protein, putative [Ixodes...	[more]

BLAST of EMLSAG00000005394 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25


Match Name	E-value	Identity	Description
gi\|290561228\|gb\|ADD38016.1\|	6.099e-36	78.05	Vacuolar protein-sorting-associated protein 36 [Le...	[more]
gi\|290462183\|gb\|ADD24139.1\|	6.296e-36	78.05	Vacuolar protein-sorting-associated protein 36 [Le...	[more]
gi\|225719352\|gb\|ACO15522.1\|	9.547e-21	56.10	Vacuolar protein-sorting-associated protein 36 [Ca...	[more]
gi\|930659853\|gb\|KPJ01895.1\|	9.234e-10	39.02	Vacuolar protein-sorting-associated protein 36 [Pa...	[more]
gi\|910342783\|ref\|XP_013175132.1\|	1.018e-9	40.24	PREDICTED: vacuolar protein-sorting-associated pro...	[more]
gi\|512913115\|ref\|XP_004927818.1\|	7.452e-9	37.80	PREDICTED: vacuolar protein-sorting-associated pro...	[more]
gi\|943958216\|ref\|XP_014361823.1\|	8.056e-9	37.80	PREDICTED: vacuolar protein-sorting-associated pro...	[more]
gi\|1126223967\|ref\|XP_019646312.1\|	1.145e-8	34.44	PREDICTED: vacuolar protein-sorting-associated pro...	[more]
gi\|913310099\|ref\|XP_013185669.1\|	1.671e-8	36.59	PREDICTED: vacuolar protein-sorting-associated pro...	[more]
gi\|909560254\|ref\|XP_013135211.1\|	2.420e-8	40.79	PREDICTED: vacuolar protein-sorting-associated pro...	[more]

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BLAST of EMLSAG00000005394 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0


Match Name	E-value	Identity	Description

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s290	supercontig	LSalAtl2s290:1069728..1071450 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	maker-LSalAtl2s290-snap-gene-9.24
Biotype	protein_coding
Evidence	IEA
Note	Vacuolar protein-sorting-associated protein 36 [Lepeophtheirus salmonis]

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000005394 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000005394	EMLSAT00000005394-701241	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s290:1069728..1071450-

gene from alignment at LSalAtl2s290:1069728..1071450-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000005394-688160 ID=EMLSAG00000005394-688160|Name=EMLSAG00000005394|organism=Lepeophtheirus salmonis|type=gene|length=1723bp|location=Sequence derived from alignment at LSalAtl2s290:1069728..1071450- (Lepeophtheirus salmonis)
ATGAGGCAGGCAGGAGTACCTTTGATTTTAAAGAATTTTGATTACGGACT
CTCTGTATTTATCAATAATCAAAATACTGAGGATATTCAAAAAGATACTC
TTAGTTTAAGTAAAGAAAATACATGTTTGACACCAGATAAATTAGCAAGG
TTGATCGCTCTTTCAGCTGGCTTACCTAGGCAGATACTTTTTACAGCTGA
AAAGGCTGGATTACTTTGTCACGATGACTCTGTAGATGGTTTGTAATTTT
AGCCAAATAGATTTTGATTCGAGGGTTAGTTAAGTAAAAAAGTTTCAACC
AATTTGTGATTTGTATTTTATTTTATAATTTCTACTCTCGTGGGTCAGAA
TCCCGAGCCAAAAAGGAGAGAGAGGAATAGATTAGCGATTAGCTACGGTA
AATATGACCGGGTCTCCCCTTAAGGACTTAAGGGTTTAATCATGATATTT
GTAGATTTTACTAGAATAAAGCCAGTCTGTTTTACGAATCTAAGGGAGTA
AGAGTTCTTATTGAAACTGTCAAATACATTATACATCACAAACTCCACCT
TAGAAATGGAATTATGATTGAGATAAGTTATATACATCAAGGAAAGTGAA
GTATTCTTATCAATGACATATTTTTCTTAGAGAAAGAGACGAAGCAGAGT
TGACTTAAGAAGAAAATGGCTTCATAATTTCAATGAAGGAACAGTGGATG
GGMGATGAGAACTCTTCCTGTTCCTCGCTTGGGCTTTAAGTCCATTATTC
TGTTGTTCTTTTTTTATCTCATTAGTTCTTATAGCAGTATACAATTATTC
GTAGAAGATTTGGAGTAATTTCGTATTTTTGAGTATTGAGGCAATGATTC
ACAAGGTCAGAAGTAACTATCCCTTGAAACAGAACATGAAGAGAGGATCA
AAAATCGTGTGGCTAGGATATCCAAATGGACAAATATGAACTCCAAGGTA
ATATGAATAGAATCATCCAATTAATTACAATCCAGGCGGAGGAGGTAATT
TTTAAGGCATTTGAATGATAAGATTAATTATATTCAATATTGCACTAAGG
TAAGCGGCAAACCATAGTCTTTGTTAGAGGGAGATGTTATCACAACAATT
TTGAATGATTAAGAAAGAAGAAAGTTGACACGGAACAACCATTTTCCTTT
TGTAATCTCAAAACAGTAATTTATTTCACCAAACGTGCCCAGTATTACTA
AATAATAAGTAATAACTAATAAGATCCATTATAGAGCAAATTAAAAAGAA
ATGAATACATAATATGAGCCCTGAAGAAATAGGTAAAGGTTTCGTGTTTT
CAAATTATAAACTTGCGTTTCGCAAAAACATTCTTTATTTTTGCAATTAA
TATAATATGACAATTGAAAATATTCATGATCTTATCACTACACAGAATAT
TTTGATCCAATTAACTAATTTTGAACATACCTATATTTAATTGAATTCAA
TTTTGCCCATAATATATATATTAATTCTGTATTTACTATGAAGTATTATG
AATTAGATAACAATATTTTTTTATTTTTTGTAAACTAAGCAAAATGATTG
GATCCTGGCTAAGTAATCATAACTCAATGAGCAGTGCAGCTATTCGATTT
CTAGTTGTAGTCGGTACGACCACCTAGCTCTGGACTCTTAACAAGTAATT
TATTATTAATCTGAGTCAAATCTTAAGTATTTTTTTAACAGTTTATGCCG
AATCTGAAGTTGCATATTATTGA

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