EMLSAG00000005713, EMLSAG00000005713-688479 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000005713 vs. C. finmarchicus
Match: gi|592838054|gb|GAXK01119490.1| (TSA: Calanus finmarchicus comp332329_c0_seq1 transcribed RNA sequence) HSP 1 Score: 75.0998 bits (183), Expect = 2.713e-14 Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 0 Query: 66 LDSFKASIYRFGYASCPASHCRLSFLSLAGIVAHKKNCAGFLRQGDFVTCSFCEVRFCQFRSLRTHQERSH 136 +DS+K S+ G+A C C+L FLSL+GIV+H + C G R D++ C C RF QF+S ++H ERSH Sbjct: 136 VDSWKHSLSMVGHAVCVHYQCQLCFLSLSGIVSHHRTCQGVARPADYLPCLHCGARFKQFKSCQSHVERSH 348
BLAST of EMLSAG00000005713 vs. C. finmarchicus
Match: gi|592796095|gb|GAXK01158473.1| (TSA: Calanus finmarchicus comp67843_c1_seq1 transcribed RNA sequence) HSP 1 Score: 76.6406 bits (187), Expect = 2.381e-13 Identity = 27/68 (39.71%), Postives = 45/68 (66.18%), Query Frame = 0 Query: 69 FKASIYRFGYASCPASHCRLSFLSLAGIVAHKKNCAGFLRQGDFVTCSFCEVRFCQFRSLRTHQERSH 136 ++ ++ GYA C + C+LSFLSLAG+V+H + C G+ + GD++ C C VR+ R+ + H +R+H Sbjct: 2014 WEQALSTQGYAQCVYTECQLSFLSLAGVVSHHRTCPGWAKPGDYLPCMHCGVRWPHHRAYQAHVQRNH 2217 HSP 2 Score: 33.8834 bits (76), Expect = 2.985e+0 Identity = 21/61 (34.43%), Postives = 32/61 (52.46%), Query Frame = 0 Query: 341 EQRAILEAYEKIVLRSEALAENAKKKIREKNELLKKEKDFKSWEEELRRREAKAQQTINEA 401 E+ IL E V + EAL + ++ K E +K ++ WEE L+RRE A+ + EA Sbjct: 1690 EKEQILSEREMEVTQLEALVQ----QMEVKAEQARKARELAMWEESLQRREEMARMRMAEA 1860
BLAST of EMLSAG00000005713 vs. C. finmarchicus
Match: gi|592796093|gb|GAXK01158475.1| (TSA: Calanus finmarchicus comp67843_c1_seq3 transcribed RNA sequence) HSP 1 Score: 67.3958 bits (163), Expect = 4.709e-12 Identity = 27/60 (45.00%), Postives = 41/60 (68.33%), Query Frame = 0 Query: 77 GYASCPASHCRLSFLSLAGIVAHKKNCAGFLRQGDFVTCSFCEVRFCQFRSLRTHQERSH 136 GYA C + C+LSFLSLAG+V+H + C G+ + GD++ C C VR+ R+ + H +R+H Sbjct: 85 GYAQCVYTECQLSFLSLAGVVSHHRTCPGWAKPGDYLPCMHCGVRWPHHRAYQAHVQRNH 264
BLAST of EMLSAG00000005713 vs. C. finmarchicus
Match: gi|592921953|gb|GAXK01036436.1| (TSA: Calanus finmarchicus comp6530929_c0_seq1 transcribed RNA sequence) HSP 1 Score: 35.4242 bits (80), Expect = 2.084e-1 Identity = 29/83 (34.94%), Postives = 38/83 (45.78%), Query Frame = 0 Query: 101 KNCAGFLRQGDFVTCSFCEVRFCQFRSLRTHQERSHGVPPLHPSEISPAHESLDSKKPILNENMEAYETRE-EQNSRLMAESR 182 K G L++G TC+ C F + ++L HQE H VP SE PILN + T + E RLMAES+ Sbjct: 5 KKKIGILQEG--FTCTHCLKSFTRSQTLLKHQEIYHEVPYTSVSE-----------PPILNSILTYTATAQPETEQRLMAESQ 214
BLAST of EMLSAG00000005713 vs. C. finmarchicus
Match: gi|592866895|gb|GAXK01090667.1| (TSA: Calanus finmarchicus comp1546501_c0_seq1 transcribed RNA sequence) HSP 1 Score: 34.6538 bits (78), Expect = 8.112e-1 Identity = 17/49 (34.69%), Postives = 25/49 (51.02%), Query Frame = 0 Query: 95 GIVAHKKNCAGFLRQ-----GDFVTCSFCEVRFCQFRSLRTHQERSHGV 138 G A K NC +R +TC FC+ + + +LR+HQ +HGV Sbjct: 172 GFGAEKGNCKRHIRNVHSKTMSNLTCEFCQKSYKNYDTLRSHQRANHGV 318
BLAST of EMLSAG00000005713 vs. C. finmarchicus
Match: gi|592932971|gb|GAXK01025582.1| (TSA: Calanus finmarchicus comp4307925_c0_seq1 transcribed RNA sequence) HSP 1 Score: 32.7278 bits (73), Expect = 1.549e+0 Identity = 13/28 (46.43%), Postives = 18/28 (64.29%), Query Frame = 0 Query: 109 QGDFVTCSFCEVRFCQFRSLRTHQERSH 136 Q D VTC+FCE +F R L H++ +H Sbjct: 236 QNDSVTCNFCEEKFTSRRDLMYHKKSTH 319
BLAST of EMLSAG00000005713 vs. C. finmarchicus
Match: gi|592942094|gb|GAXK01016459.1| (TSA: Calanus finmarchicus comp4597556_c0_seq1 transcribed RNA sequence) HSP 1 Score: 33.8834 bits (76), Expect = 1.648e+0 Identity = 35/137 (25.55%), Postives = 53/137 (38.69%), Query Frame = 0 Query: 78 YASCPASHCRLSFLSLAGIVAHKKNCAGF----LRQGDFVTCSFCEVRFCQFRSLRTHQERSHGV--------PPLHPSEISPAHESLDSKKPILNENMEAYETREEQNSRLMAESRIASNARPRGRPGKYTEVRRE 202 YA C F S G + H G ++ C C+ F R L TH E HG PL + PA+ S + + IL ++E + E+ N+ L N++P GR K ++ R+ Sbjct: 161 YADLTCKICAKVFKSNTGRIIHMDTKHGISDDHMQDNHGYECGICDATFRSKRGLDTHSETKHGRKIISVVEEKPLKSAMRKPANNSRNVYEEIL-RDIEGEVSVEKMNTDL----NTMMNSKPSGREKKMLKLMRK 556
BLAST of EMLSAG00000005713 vs. C. finmarchicus
Match: gi|592901071|gb|GAXK01057304.1| (TSA: Calanus finmarchicus comp4678690_c0_seq1 transcribed RNA sequence) HSP 1 Score: 33.4982 bits (75), Expect = 2.303e+0 Identity = 21/86 (24.42%), Postives = 36/86 (41.86%), Query Frame = 0 Query: 83 ASHCRLSFLSLAGIVAHKKNCAGFLRQGDFVTCSFCEVRFCQFRSLRTHQERSHGVPPLHPSEISPAHESLDSKKPILNENMEAYE 168 S C F + H+++C+G ++ +V CS C+ SL H + H P + E L SK+ + N+ +E Sbjct: 230 CSKCDKKFYQFKSMKNHQQSCSGSIKSPQWVVCSLCKKSLSDKNSLVRHMKVVHN-PLKETYQCDTCEEILPSKRHLKAHNLSKHE 484
BLAST of EMLSAG00000005713 vs. C. finmarchicus
Match: gi|592874153|gb|GAXK01083409.1| (TSA: Calanus finmarchicus comp872338_c0_seq1 transcribed RNA sequence) HSP 1 Score: 33.8834 bits (76), Expect = 2.649e+0 Identity = 26/91 (28.57%), Postives = 38/91 (41.76%), Query Frame = 0 Query: 81 CPASHCRLSFLSLAGIVAHKKNCAGFLRQGDF-VTCSFCEVRFCQFRSLRTHQERSHGVPPLHPSEISPAHES---LDSKKPILNENMEAY 167 CP C F + H + C +GD C CE+RF R +R H++ H P SE ES L+ K ++++ E Y Sbjct: 537 CPVDECENIFTKAKSLDDHVRRC----HKGDMPYKCIICELRFATKRKIRVHRKIFHNSKPNVCSECELKFESKVGLNRHKKMVHKTTETY 797
BLAST of EMLSAG00000005713 vs. C. finmarchicus
Match: gi|592829449|gb|GAXK01128095.1| (TSA: Calanus finmarchicus comp1772923_c0_seq1 transcribed RNA sequence) HSP 1 Score: 33.4982 bits (75), Expect = 4.349e+0 Identity = 16/42 (38.10%), Postives = 23/42 (54.76%), Query Frame = 0 Query: 98 AHKKNCAGFLRQGDFVTCSFCEVRFCQFRSLRTHQERSHGVP 139 A K++ A + DFV C+ CE + R+L+ H ER H P Sbjct: 26 AFKRHIASHTKLKDFV-CNICEKAYADKRNLKIHMERQHNTP 148
BLAST of EMLSAG00000005713 vs. L. salmonis peptides
Match: EMLSAP00000005713 (pep:novel supercontig:LSalAtl2s:LSalAtl2s309:641092:644308:-1 gene:EMLSAG00000005713 transcript:EMLSAT00000005713 description:"maker-LSalAtl2s309-augustus-gene-6.42") HSP 1 Score: 1856.65 bits (4808), Expect = 0.000e+0 Identity = 923/923 (100.00%), Postives = 923/923 (100.00%), Query Frame = 0 Query: 1 MCGSEIAVKERRDKMSNPYPFRRTVTLSKGSNFHQAHPGSSGPVRIPMKRSLVPTDDPHCYRDDELDSFKASIYRFGYASCPASHCRLSFLSLAGIVAHKKNCAGFLRQGDFVTCSFCEVRFCQFRSLRTHQERSHGVPPLHPSEISPAHESLDSKKPILNENMEAYETREEQNSRLMAESRIASNARPRGRPGKYTEVRRETNEDFYELDYSYYSRHSSIINLKNIIVVNNNRGAFSLXSPPRIMKVRTTDGNILYVRPIAGVSGEQKEEENWSSSSSTSGSARSALKSYNDKSRRAHVGSSLESVDYDDDVKIEEEVSCTSRNSSSSSSNASKKNSLEEQRAILEAYEKIVLRSEALAENAKKKIREKNELLKKEKDFKSWEEELRRREAKAQQTINEALFTLGSDSLDCTKEEDISHSPPSRRSAVVIDLCDDLDTHETNESYILPDSTRSVRSAGSTFSASSSSINEDNLSDSISLVASLAKESNVYSSPEPINAPPPLSTPDLSDASVAEPNRQKMISDQGDLTISSNGSNGDNLNSNCSTLKKQKSSIPRILSKKNNIRRTKRLRKSGRSTNSLQRQLQQFLSSIDTSSLKTRRTCDASIEDSNSRLDLEDTQSLNINRQPSSSQGVGRIKVIKPVKIPANAEPSNIKSTPSGVKYILPSNMQSRSSQIIDSPIQNNGEHSLVQNESEHTPIQNESELIHNRIHKSRNELISELIDSPSGGKSSQSFEEVISSDLPICYPNNEDYIVAEEEAKEVMDSPDLTQEHSNSPTDDKIDLEEHKISLSGSDSEETTTVVENTDSLSIQIEEVVSNSNLIQEPLETPKRTRRKKRTSKASYDKTSPSNTKKELRRSTRIPRVQNTPSIIEPELPKMERNKRQCTTXPRVQNXPXIIXPESSKKERNKRQCTTXXXVKYPVNN 923 MCGSEIAVKERRDKMSNPYPFRRTVTLSKGSNFHQAHPGSSGPVRIPMKRSLVPTDDPHCYRDDELDSFKASIYRFGYASCPASHCRLSFLSLAGIVAHKKNCAGFLRQGDFVTCSFCEVRFCQFRSLRTHQERSHGVPPLHPSEISPAHESLDSKKPILNENMEAYETREEQNSRLMAESRIASNARPRGRPGKYTEVRRETNEDFYELDYSYYSRHSSIINLKNIIVVNNNRGAFSLXSPPRIMKVRTTDGNILYVRPIAGVSGEQKEEENWSSSSSTSGSARSALKSYNDKSRRAHVGSSLESVDYDDDVKIEEEVSCTSRNSSSSSSNASKKNSLEEQRAILEAYEKIVLRSEALAENAKKKIREKNELLKKEKDFKSWEEELRRREAKAQQTINEALFTLGSDSLDCTKEEDISHSPPSRRSAVVIDLCDDLDTHETNESYILPDSTRSVRSAGSTFSASSSSINEDNLSDSISLVASLAKESNVYSSPEPINAPPPLSTPDLSDASVAEPNRQKMISDQGDLTISSNGSNGDNLNSNCSTLKKQKSSIPRILSKKNNIRRTKRLRKSGRSTNSLQRQLQQFLSSIDTSSLKTRRTCDASIEDSNSRLDLEDTQSLNINRQPSSSQGVGRIKVIKPVKIPANAEPSNIKSTPSGVKYILPSNMQSRSSQIIDSPIQNNGEHSLVQNESEHTPIQNESELIHNRIHKSRNELISELIDSPSGGKSSQSFEEVISSDLPICYPNNEDYIVAEEEAKEVMDSPDLTQEHSNSPTDDKIDLEEHKISLSGSDSEETTTVVENTDSLSIQIEEVVSNSNLIQEPLETPKRTRRKKRTSKASYDKTSPSNTKKELRRSTRIPRVQNTPSIIEPELPKMERNKRQCTTXPRVQNXPXIIXPESSKKERNKRQCTTXXXVKYPVNN Sbjct: 1 MCGSEIAVKERRDKMSNPYPFRRTVTLSKGSNFHQAHPGSSGPVRIPMKRSLVPTDDPHCYRDDELDSFKASIYRFGYASCPASHCRLSFLSLAGIVAHKKNCAGFLRQGDFVTCSFCEVRFCQFRSLRTHQERSHGVPPLHPSEISPAHESLDSKKPILNENMEAYETREEQNSRLMAESRIASNARPRGRPGKYTEVRRETNEDFYELDYSYYSRHSSIINLKNIIVVNNNRGAFSLXSPPRIMKVRTTDGNILYVRPIAGVSGEQKEEENWSSSSSTSGSARSALKSYNDKSRRAHVGSSLESVDYDDDVKIEEEVSCTSRNSSSSSSNASKKNSLEEQRAILEAYEKIVLRSEALAENAKKKIREKNELLKKEKDFKSWEEELRRREAKAQQTINEALFTLGSDSLDCTKEEDISHSPPSRRSAVVIDLCDDLDTHETNESYILPDSTRSVRSAGSTFSASSSSINEDNLSDSISLVASLAKESNVYSSPEPINAPPPLSTPDLSDASVAEPNRQKMISDQGDLTISSNGSNGDNLNSNCSTLKKQKSSIPRILSKKNNIRRTKRLRKSGRSTNSLQRQLQQFLSSIDTSSLKTRRTCDASIEDSNSRLDLEDTQSLNINRQPSSSQGVGRIKVIKPVKIPANAEPSNIKSTPSGVKYILPSNMQSRSSQIIDSPIQNNGEHSLVQNESEHTPIQNESELIHNRIHKSRNELISELIDSPSGGKSSQSFEEVISSDLPICYPNNEDYIVAEEEAKEVMDSPDLTQEHSNSPTDDKIDLEEHKISLSGSDSEETTTVVENTDSLSIQIEEVVSNSNLIQEPLETPKRTRRKKRTSKASYDKTSPSNTKKELRRSTRIPRVQNTPSIIEPELPKMERNKRQCTTXPRVQNXPXIIXPESSKKERNKRQCTTXXXVKYPVNN 923
BLAST of EMLSAG00000005713 vs. L. salmonis peptides
Match: EMLSAP00000005712 (pep:novel supercontig:LSalAtl2s:LSalAtl2s309:638188:641069:-1 gene:EMLSAG00000005712 transcript:EMLSAT00000005712 description:"maker-LSalAtl2s309-augustus-gene-6.41") HSP 1 Score: 78.5666 bits (192), Expect = 4.887e-15 Identity = 40/59 (67.80%), Postives = 43/59 (72.88%), Query Frame = 0 Query: 855 RRSTRIPRVQNTPSIIEPELPKMERNKRQCTTXPRVQNXPXIIXPESSKKERNKRQCTT 913 R+ T PRVQNTPSIIEPE K E+NKRQ TT PRVQN II PES K ERN QCT+ Sbjct: 6 RQCTTTPRVQNTPSIIEPESQKNEQNKRQSTTTPRVQNTLSIIEPESQKMERNITQCTS 64 HSP 2 Score: 60.8474 bits (146), Expect = 1.266e-9 Identity = 29/42 (69.05%), Postives = 31/42 (73.81%), Query Frame = 0 Query: 877 MERNKRQCTTXPRVQNXPXIIXPESSKKERNKRQCTTXXXVK 918 MER KRQCTT PRVQN P II PES K E+NKRQ TT V+ Sbjct: 1 MERKKRQCTTTPRVQNTPSIIEPESQKNEQNKRQSTTTPRVQ 42 The following BLAST results are available for this feature:
BLAST of EMLSAG00000005713 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000005713 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 13
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BLAST of EMLSAG00000005713 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000005713 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000005713 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000005713 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000005713 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s309:641092..644308- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000005713-688479 ID=EMLSAG00000005713-688479|Name=EMLSAG00000005713|organism=Lepeophtheirus salmonis|type=gene|length=3217bp|location=Sequence derived from alignment at LSalAtl2s309:641092..644308- (Lepeophtheirus salmonis)back to top Add to Basket
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