EMLSAG00000006006, EMLSAG00000006006-688772 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000006006 vs. GO
Match: - (symbol:PPARG "Peroxisome proliferator-activated receptor gamma" species:10029 "Cricetulus griseus" [GO:0003677 "DNA binding" evidence=ISS] [GO:0030374 "ligand-dependent nuclear receptor transcription coactivator activity" evidence=ISS] [GO:0032526 "response to retinoic acid" evidence=ISS] [GO:0045600 "positive regulation of fat cell differentiation" evidence=ISS] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISS] [GO:0060850 "regulation of transcription involved in cell fate commitment" evidence=ISS] InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003074 InterPro:IPR003077 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01288 PRINTS:PR01291 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0006366 GO:GO:0032526 GO:GO:0030522 GO:GO:0030374 HOVERGEN:HBG106004 CTD:5468 KO:K08530 InterPro:IPR022590 Pfam:PF12577 EMBL:Z30972 PIR:JC4264 RefSeq:NP_001231210.1 ProteinModelPortal:P57797 SMR:P57797 PRIDE:P57797 GeneID:100689245 KEGG:cge:100689245 Uniprot:P57797) HSP 1 Score: 56.225 bits (134), Expect = 7.126e-9 Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 0 Query: 63 CRVCGDKASGFHYGVHSCEGCK 84 CRVCGDKASGFHYGVH+CEGCK Sbjct: 109 CRVCGDKASGFHYGVHACEGCK 130
BLAST of EMLSAG00000006006 vs. GO
Match: - (symbol:Nr1d1 "Nuclear receptor subfamily 1 group D member 1" species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010871 "negative regulation of receptor biosynthetic process" evidence=IEA] [GO:0034144 "negative regulation of toll-like receptor 4 signaling pathway" evidence=IEA] [GO:0071222 "cellular response to lipopolysaccharide" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:628827 GO:GO:0007623 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0044212 GO:GO:0071222 GO:GO:0000122 GO:GO:0000790 EMBL:CH473948 GO:GO:0034144 GeneTree:ENSGT00740000114909 OMA:GTSPGNF OrthoDB:EOG776SQ0 TreeFam:TF328382 GO:GO:0010871 UniGene:Rn.29848 EMBL:AABR06065506 Ensembl:ENSRNOT00000012537 NextBio:35583873 PRO:PR:G3V770 Uniprot:G3V770) HSP 1 Score: 56.6102 bits (135), Expect = 7.222e-9 Identity = 28/60 (46.67%), Postives = 38/60 (63.33%), Query Frame = 0 Query: 45 PEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK-------LKKIECNKSLKDE 97 P K + I + +G +LC+VCGD ASGFHYGVH+CEGCK + I+ + LK+E Sbjct: 115 PSKGTSNITKLNGM-VLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNE 173
BLAST of EMLSAG00000006006 vs. GO
Match: - (symbol:Nr1d1 "Nuclear receptor subfamily 1 group D member 1" species:10116 "Rattus norvegicus" [GO:0001046 "core promoter sequence-specific DNA binding" evidence=ISS] [GO:0001222 "transcription corepressor binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010498 "proteasomal protein catabolic process" evidence=ISS] [GO:0019216 "regulation of lipid metabolic process" evidence=ISS] [GO:0030154 "cell differentiation" evidence=IEA] [GO:0030425 "dendrite" evidence=ISS] [GO:0035947 "regulation of gluconeogenesis by regulation of transcription from RNA polymerase II promoter" evidence=ISS] [GO:0042752 "regulation of circadian rhythm" evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISS] [GO:0044321 "response to leptin" evidence=ISS] [GO:0045598 "regulation of fat cell differentiation" evidence=ISS] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=ISS] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=IDA] [GO:0060086 "circadian temperature homeostasis" evidence=ISS] [GO:0061178 "regulation of insulin secretion involved in cellular response to glucose stimulus" evidence=ISS] [GO:0061469 "regulation of type B pancreatic cell proliferation" evidence=ISS] [GO:0070859 "positive regulation of bile acid biosynthetic process" evidence=ISS] [GO:2000188 "regulation of cholesterol homeostasis" evidence=ISS] InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:628827 GO:GO:0005634 GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0030154 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0043197 GO:GO:0003700 GO:GO:0006351 GO:GO:0042752 GO:GO:0010498 GO:GO:0001046 GO:GO:0061178 GO:GO:0061469 GO:GO:0070859 GO:GO:0045598 eggNOG:NOG324222 GO:GO:0001222 GO:GO:2000188 GO:GO:0035947 CTD:9572 HOGENOM:HOG000261691 KO:K03728 GO:GO:0060086 GO:GO:0044321 HOVERGEN:HBG106790 EMBL:BC062047 EMBL:M25804 PIR:A30226 RefSeq:NP_001106893.1 RefSeq:NP_665718.2 UniGene:Rn.29848 ProteinModelPortal:Q63503 SMR:Q63503 PaxDb:Q63503 GeneID:252917 KEGG:rno:252917 UCSC:RGD:628827 InParanoid:Q63503 NextBio:624049 PRO:PR:Q63503 Genevestigator:Q63503 Uniprot:Q63503) HSP 1 Score: 56.6102 bits (135), Expect = 7.229e-9 Identity = 28/60 (46.67%), Postives = 38/60 (63.33%), Query Frame = 0 Query: 45 PEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK-------LKKIECNKSLKDE 97 P K + I + +G +LC+VCGD ASGFHYGVH+CEGCK + I+ + LK+E Sbjct: 116 PSKGTSNITKLNGM-VLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNE 174
BLAST of EMLSAG00000006006 vs. GO
Match: - (symbol:Nr1d1 "nuclear receptor subfamily 1, group D, member 1" species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000790 "nuclear chromatin" evidence=IEA;ISO] [GO:0001046 "core promoter sequence-specific DNA binding" evidence=IEA;ISO;ISS] [GO:0001222 "transcription corepressor binding" evidence=IEA;ISO;ISS] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISO] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010498 "proteasomal protein catabolic process" evidence=ISO;ISS] [GO:0010871 "negative regulation of receptor biosynthetic process" evidence=IEA;ISO] [GO:0019216 "regulation of lipid metabolic process" evidence=ISO;ISS] [GO:0020037 "heme binding" evidence=IEA;ISO] [GO:0030154 "cell differentiation" evidence=IEA] [GO:0030425 "dendrite" evidence=ISO;ISS] [GO:0034144 "negative regulation of toll-like receptor 4 signaling pathway" evidence=IEA;ISO] [GO:0035947 "regulation of gluconeogenesis by regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO;ISS] [GO:0042752 "regulation of circadian rhythm" evidence=ISO;IDA] [GO:0043197 "dendritic spine" evidence=ISO;ISS] [GO:0044212 "transcription regulatory region DNA binding" evidence=ISO] [GO:0044321 "response to leptin" evidence=ISO;ISS] [GO:0045598 "regulation of fat cell differentiation" evidence=ISO;ISS] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=ISO;ISS] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISO;IDA] [GO:0060086 "circadian temperature homeostasis" evidence=ISO;ISS] [GO:0061178 "regulation of insulin secretion involved in cellular response to glucose stimulus" evidence=ISO;ISS] [GO:0061469 "regulation of type B pancreatic cell proliferation" evidence=ISO;ISS] [GO:0070859 "positive regulation of bile acid biosynthetic process" evidence=ISO;ISS] [GO:0071222 "cellular response to lipopolysaccharide" evidence=IEA;ISO] [GO:2000188 "regulation of cholesterol homeostasis" evidence=ISO;ISS] [GO:2000189 "positive regulation of cholesterol homeostasis" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:628827 GO:GO:0005634 GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0030154 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0043197 GO:GO:0003700 GO:GO:0006351 GO:GO:0042752 GO:GO:0010498 GO:GO:0001046 GO:GO:0061178 GO:GO:0061469 GO:GO:0070859 GO:GO:0045598 eggNOG:NOG324222 GO:GO:0001222 GO:GO:2000188 GO:GO:0035947 CTD:9572 HOGENOM:HOG000261691 KO:K03728 GO:GO:0060086 GO:GO:0044321 HOVERGEN:HBG106790 EMBL:BC062047 EMBL:M25804 PIR:A30226 RefSeq:NP_001106893.1 RefSeq:NP_665718.2 UniGene:Rn.29848 ProteinModelPortal:Q63503 SMR:Q63503 PaxDb:Q63503 GeneID:252917 KEGG:rno:252917 UCSC:RGD:628827 InParanoid:Q63503 NextBio:624049 PRO:PR:Q63503 Genevestigator:Q63503 Uniprot:Q63503) HSP 1 Score: 56.6102 bits (135), Expect = 7.229e-9 Identity = 28/60 (46.67%), Postives = 38/60 (63.33%), Query Frame = 0 Query: 45 PEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK-------LKKIECNKSLKDE 97 P K + I + +G +LC+VCGD ASGFHYGVH+CEGCK + I+ + LK+E Sbjct: 116 PSKGTSNITKLNGM-VLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNE 174
BLAST of EMLSAG00000006006 vs. GO
Match: - (symbol:Pparg "Peroxisome proliferator-activated receptor gamma" species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0001012 "RNA polymerase II regulatory region DNA binding" evidence=IEA] [GO:0001890 "placenta development" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IEA] [GO:0006919 "activation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IEA] [GO:0008144 "drug binding" evidence=IEA] [GO:0008217 "regulation of blood pressure" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010871 "negative regulation of receptor biosynthetic process" evidence=IEA] [GO:0010887 "negative regulation of cholesterol storage" evidence=IEA] [GO:0010891 "negative regulation of sequestering of triglyceride" evidence=IEA] [GO:0015909 "long-chain fatty acid transport" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA] [GO:0030224 "monocyte differentiation" evidence=IEA] [GO:0030374 "ligand-dependent nuclear receptor transcription coactivator activity" evidence=ISS] [GO:0030855 "epithelial cell differentiation" evidence=IEA] [GO:0032526 "response to retinoic acid" evidence=ISS] [GO:0032869 "cellular response to insulin stimulus" evidence=IEA] [GO:0033613 "activating transcription factor binding" evidence=IEA] [GO:0035357 "peroxisome proliferator activated receptor signaling pathway" evidence=IEA] [GO:0042593 "glucose homeostasis" evidence=IEA] [GO:0042953 "lipoprotein transport" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0044212 "transcription regulatory region DNA binding" evidence=IDA] [GO:0045165 "cell fate commitment" evidence=IEA] [GO:0045600 "positive regulation of fat cell differentiation" evidence=ISS] [GO:0045713 "low-density lipoprotein particle receptor biosynthetic process" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA] [GO:0046965 "retinoid X receptor binding" evidence=IEA] [GO:0048469 "cell maturation" evidence=IEA] [GO:0048662 "negative regulation of smooth muscle cell proliferation" evidence=IEA] [GO:0050872 "white fat cell differentiation" evidence=ISS] [GO:0050873 "brown fat cell differentiation" evidence=IEA] [GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0055098 "response to low-density lipoprotein particle" evidence=IEA] [GO:0060336 "negative regulation of interferon-gamma-mediated signaling pathway" evidence=IEA] [GO:0071285 "cellular response to lithium ion" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003074 InterPro:IPR003077 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01288 PRINTS:PR01291 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:3371 GO:GO:0005829 GO:GO:0005634 GO:GO:0032869 GO:GO:0008285 GO:GO:0007507 GO:GO:0030308 GO:GO:0042493 GO:GO:0008144 GO:GO:0031100 GO:GO:0009409 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0050873 GO:GO:0002674 GO:GO:0031000 GO:GO:0050872 GO:GO:0003700 GO:GO:0045600 GO:GO:0003682 GO:GO:0019395 GO:GO:0042593 GO:GO:0046321 GO:GO:0044212 GO:GO:0010887 GO:GO:0055098 GO:GO:0043627 GO:GO:0042953 GO:GO:0000122 GO:GO:0010891 GO:GO:0051091 GO:GO:0006366 GO:GO:0030855 GO:GO:0015909 GO:GO:0071285 GO:GO:0006919 GO:GO:0032526 GO:GO:0008217 GO:GO:0001890 GO:GO:0048714 GO:GO:0001012 GO:GO:0048662 GO:GO:0033189 GO:GO:0045165 GO:GO:0048469 GO:GO:0030374 GO:GO:0030224 GO:GO:0051974 eggNOG:NOG266867 GO:GO:0060336 GeneTree:ENSGT00740000115076 GO:GO:0035357 GO:GO:0010871 TreeFam:TF316304 HOGENOM:HOG000261626 HOVERGEN:HBG106004 OrthoDB:EOG7X9G7F CTD:5468 KO:K08530 OMA:STPHYED GO:GO:0045713 InterPro:IPR022590 Pfam:PF12577 EMBL:AF156666 EMBL:AF156665 EMBL:AB019561 EMBL:Y12882 EMBL:AB011365 EMBL:AF246457 EMBL:AF246458 RefSeq:NP_001138838.1 RefSeq:NP_001138839.1 RefSeq:NP_037256.1 RefSeq:XP_006237071.1 UniGene:Rn.23443 ProteinModelPortal:O88275 SMR:O88275 BindingDB:O88275 ChEMBL:CHEMBL4797 PhosphoSite:O88275 PRIDE:O88275 Ensembl:ENSRNOT00000012137 Ensembl:ENSRNOT00000051858 GeneID:25664 KEGG:rno:25664 UCSC:RGD:3371 InParanoid:O88275 NextBio:607577 PRO:PR:O88275 Genevestigator:O88275 Uniprot:O88275) HSP 1 Score: 56.225 bits (134), Expect = 7.496e-9 Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 0 Query: 63 CRVCGDKASGFHYGVHSCEGCK 84 CRVCGDKASGFHYGVH+CEGCK Sbjct: 139 CRVCGDKASGFHYGVHACEGCK 160
BLAST of EMLSAG00000006006 vs. C. finmarchicus
Match: gi|592822246|gb|GAXK01132322.1| (TSA: Calanus finmarchicus comp26686_c0_seq1 transcribed RNA sequence) HSP 1 Score: 76.2554 bits (186), Expect = 7.986e-16 Identity = 32/37 (86.49%), Postives = 35/37 (94.59%), Query Frame = 0 Query: 48 SSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 +SR ++EFDGND VLCRVCGDKASGFHYGVHSCEGCK Sbjct: 3902 TSRTLIEFDGNDCVLCRVCGDKASGFHYGVHSCEGCK 4012
BLAST of EMLSAG00000006006 vs. C. finmarchicus
Match: gi|592822245|gb|GAXK01132323.1| (TSA: Calanus finmarchicus comp26686_c0_seq2 transcribed RNA sequence) HSP 1 Score: 72.4034 bits (176), Expect = 1.540e-14 Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0 Query: 53 LEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 +EFDGND VLCRVCGDKASGFHYGVHSCEGCK Sbjct: 3902 IEFDGNDCVLCRVCGDKASGFHYGVHSCEGCK 3997
BLAST of EMLSAG00000006006 vs. C. finmarchicus
Match: gi|592810747|gb|GAXK01143821.1| (TSA: Calanus finmarchicus comp480929_c1_seq2 transcribed RNA sequence) HSP 1 Score: 52.7582 bits (125), Expect = 5.161e-8 Identity = 21/24 (87.50%), Postives = 22/24 (91.67%), Query Frame = 0 Query: 61 VLCRVCGDKASGFHYGVHSCEGCK 84 V CRVCGDKASG+HYGV SCEGCK Sbjct: 942 VPCRVCGDKASGYHYGVTSCEGCK 1013
BLAST of EMLSAG00000006006 vs. C. finmarchicus
Match: gi|592810748|gb|GAXK01143820.1| (TSA: Calanus finmarchicus comp480929_c1_seq1 transcribed RNA sequence) HSP 1 Score: 52.7582 bits (125), Expect = 5.172e-8 Identity = 21/24 (87.50%), Postives = 22/24 (91.67%), Query Frame = 0 Query: 61 VLCRVCGDKASGFHYGVHSCEGCK 84 V CRVCGDKASG+HYGV SCEGCK Sbjct: 942 VPCRVCGDKASGYHYGVTSCEGCK 1013
BLAST of EMLSAG00000006006 vs. C. finmarchicus
Match: gi|592814756|gb|GAXK01139812.1| (TSA: Calanus finmarchicus comp832560_c0_seq2 transcribed RNA sequence) HSP 1 Score: 49.6766 bits (117), Expect = 3.864e-7 Identity = 19/33 (57.58%), Postives = 25/33 (75.76%), Query Frame = 0 Query: 52 ILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 +L + +LC+VCGDKASG HYGV SC+GC+ Sbjct: 901 MLSLERKGDILCQVCGDKASGKHYGVPSCDGCR 999
BLAST of EMLSAG00000006006 vs. C. finmarchicus
Match: gi|592814757|gb|GAXK01139811.1| (TSA: Calanus finmarchicus comp832560_c0_seq1 transcribed RNA sequence) HSP 1 Score: 49.6766 bits (117), Expect = 4.836e-7 Identity = 19/33 (57.58%), Postives = 25/33 (75.76%), Query Frame = 0 Query: 52 ILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 +L + +LC+VCGDKASG HYGV SC+GC+ Sbjct: 1441 MLSLERKGDILCQVCGDKASGKHYGVPSCDGCR 1539
BLAST of EMLSAG00000006006 vs. C. finmarchicus
Match: gi|592793189|gb|GAXK01161379.1| (TSA: Calanus finmarchicus comp35375_c1_seq3 transcribed RNA sequence) HSP 1 Score: 47.3654 bits (111), Expect = 2.968e-6 Identity = 17/23 (73.91%), Postives = 21/23 (91.30%), Query Frame = 0 Query: 62 LCRVCGDKASGFHYGVHSCEGCK 84 +C +CGD+ASG HYGV+SCEGCK Sbjct: 792 MCSICGDRASGKHYGVYSCEGCK 860
BLAST of EMLSAG00000006006 vs. C. finmarchicus
Match: gi|592793190|gb|GAXK01161378.1| (TSA: Calanus finmarchicus comp35375_c1_seq2 transcribed RNA sequence) HSP 1 Score: 47.3654 bits (111), Expect = 3.103e-6 Identity = 17/23 (73.91%), Postives = 21/23 (91.30%), Query Frame = 0 Query: 62 LCRVCGDKASGFHYGVHSCEGCK 84 +C +CGD+ASG HYGV+SCEGCK Sbjct: 792 MCSICGDRASGKHYGVYSCEGCK 860
BLAST of EMLSAG00000006006 vs. C. finmarchicus
Match: gi|592793191|gb|GAXK01161377.1| (TSA: Calanus finmarchicus comp35375_c1_seq1 transcribed RNA sequence) HSP 1 Score: 47.3654 bits (111), Expect = 3.109e-6 Identity = 17/23 (73.91%), Postives = 21/23 (91.30%), Query Frame = 0 Query: 62 LCRVCGDKASGFHYGVHSCEGCK 84 +C +CGD+ASG HYGV+SCEGCK Sbjct: 792 MCSICGDRASGKHYGVYSCEGCK 860
BLAST of EMLSAG00000006006 vs. C. finmarchicus
Match: gi|592829905|gb|GAXK01127639.1| (TSA: Calanus finmarchicus comp171820_c0_seq4 transcribed RNA sequence) HSP 1 Score: 46.595 bits (109), Expect = 6.087e-6 Identity = 19/39 (48.72%), Postives = 28/39 (71.79%), Query Frame = 0 Query: 46 EKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 E ++R+I E D ++C +C DKA+G HYG+ +CEGCK Sbjct: 1849 EPTNRMIEEDD--QPMICMICEDKATGLHYGIITCEGCK 1959
BLAST of EMLSAG00000006006 vs. L. salmonis peptides
Match: EMLSAP00000006006 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3269:8822:10816:1 gene:EMLSAG00000006006 transcript:EMLSAT00000006006 description:"snap_masked-LSalAtl2s3269-processed-gene-0.1") HSP 1 Score: 221.09 bits (562), Expect = 1.992e-75 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 Query: 1 MNSVKDDKVYFHTLGSIKMEKRDKDETNVYTSSSDLLLSPLSLHPEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCKLKKIECNKSLKDEEHIFFTSFFSQ 108 MNSVKDDKVYFHTLGSIKMEKRDKDETNVYTSSSDLLLSPLSLHPEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCKLKKIECNKSLKDEEHIFFTSFFSQ Sbjct: 1 MNSVKDDKVYFHTLGSIKMEKRDKDETNVYTSSSDLLLSPLSLHPEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCKLKKIECNKSLKDEEHIFFTSFFSQ 108
BLAST of EMLSAG00000006006 vs. L. salmonis peptides
Match: EMLSAP00000005616 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3012:6355:43905:-1 gene:EMLSAG00000005616 transcript:EMLSAT00000005616 description:"augustus_masked-LSalAtl2s3012-processed-gene-0.2") HSP 1 Score: 126.716 bits (317), Expect = 3.539e-37 Identity = 61/85 (71.76%), Postives = 71/85 (83.53%), Query Frame = 0 Query: 1 MNSVKDDKVYFHTLGSIKMEKRDKDETNVYTSSSDLLLSPLSLHPEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCKL 85 M+S++ DKV FHT SIKM++ +DETNVYTS+S+ PLS+ PEKS+R ILEFDGNDQVLCR CGDK SGFHYGVHSCEGCKL Sbjct: 113 MHSMRGDKVAFHTPESIKMKRGGEDETNVYTSTSE---PPLSISPEKSARTILEFDGNDQVLCRXCGDKXSGFHYGVHSCEGCKL 194
BLAST of EMLSAG00000006006 vs. L. salmonis peptides
Match: EMLSAP00000008071 (pep:novel supercontig:LSalAtl2s:LSalAtl2s47:304551:317770:1 gene:EMLSAG00000008071 transcript:EMLSAT00000008071 description:"snap_masked-LSalAtl2s47-processed-gene-3.10") HSP 1 Score: 48.1358 bits (113), Expect = 1.105e-7 Identity = 21/36 (58.33%), Postives = 25/36 (69.44%), Query Frame = 0 Query: 49 SRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 SR I++ + + C VCGD ASGFHYGV SCE CK Sbjct: 257 SRDIIKEEEGQRRTCLVCGDIASGFHYGVSSCEACK 292
BLAST of EMLSAG00000006006 vs. L. salmonis peptides
Match: EMLSAP00000009969 (pep:novel supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-1 gene:EMLSAG00000009969 transcript:EMLSAT00000009969 description:"maker-LSalAtl2s651-augustus-gene-2.5") HSP 1 Score: 46.595 bits (109), Expect = 3.081e-7 Identity = 26/71 (36.62%), Postives = 38/71 (53.52%), Query Frame = 0 Query: 14 LGSIKMEKRDKDETNVYTSSSDLLLSPLSLHPEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 L M K++ + ++ +SS L P SS + + ++LC VCGDK+SG HYG +CEGCK Sbjct: 36 LSVASMTKKELPDHHIVNNSSSLTA------PSPSSGT----NSSTEILCVVCGDKSSGKHYGQFTCEGCK 96
BLAST of EMLSAG00000006006 vs. L. salmonis peptides
Match: EMLSAP00000000733 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1117:84476:96586:1 gene:EMLSAG00000000733 transcript:EMLSAT00000000733 description:"maker-LSalAtl2s1117-snap-gene-1.23") HSP 1 Score: 46.2098 bits (108), Expect = 4.742e-7 Identity = 17/24 (70.83%), Postives = 21/24 (87.50%), Query Frame = 0 Query: 61 VLCRVCGDKASGFHYGVHSCEGCK 84 + C+VCGDK+SG HYGV +CEGCK Sbjct: 45 IPCKVCGDKSSGVHYGVITCEGCK 68
BLAST of EMLSAG00000006006 vs. L. salmonis peptides
Match: EMLSAP00000001919 (pep:novel supercontig:LSalAtl2s:LSalAtl2s132:616435:622808:1 gene:EMLSAG00000001919 transcript:EMLSAT00000001919 description:"augustus_masked-LSalAtl2s132-processed-gene-6.5") HSP 1 Score: 45.8246 bits (107), Expect = 5.722e-7 Identity = 17/22 (77.27%), Postives = 20/22 (90.91%), Query Frame = 0 Query: 63 CRVCGDKASGFHYGVHSCEGCK 84 C +CGD+ASG HYGV+SCEGCK Sbjct: 91 CSICGDRASGKHYGVYSCEGCK 112
BLAST of EMLSAG00000006006 vs. SwissProt
Match: gi|1706557|sp|P50239.1|E75_GALME (RecName: Full=Ecdysone-inducible protein E75; AltName: Full=Nuclear receptor subfamily 1 group D member 3) HSP 1 Score: 72.7886 bits (177), Expect = 3.366e-15 Identity = 32/48 (66.67%), Postives = 38/48 (79.17%), Query Frame = 0 Query: 37 LLSPLSLHPEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 ++SP+ H E+ + +EFDG VLCRVCGDKASGFHYGVHSCEGCK Sbjct: 24 IMSPV--HKEREPELHIEFDGT-TVLCRVCGDKASGFHYGVHSCEGCK 68
BLAST of EMLSAG00000006006 vs. SwissProt
Match: gi|6166165|sp|Q08893.2|E75_MANSE (RecName: Full=Ecdysone-inducible protein E75; AltName: Full=Nuclear receptor subfamily 1 group D member 3) HSP 1 Score: 71.2478 bits (173), Expect = 1.237e-14 Identity = 30/42 (71.43%), Postives = 34/42 (80.95%), Query Frame = 0 Query: 43 LHPEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 +H E+ + +EFDG VLCRVCGDKASGFHYGVHSCEGCK Sbjct: 26 VHREREPELHIEFDGT-TVLCRVCGDKASGFHYGVHSCEGCK 66
BLAST of EMLSAG00000006006 vs. SwissProt
Match: gi|6015044|sp|O01639.1|E75_CHOFU (RecName: Full=Ecdysone-inducible protein E75; AltName: Full=Nuclear receptor subfamily 1 group D member 3) HSP 1 Score: 71.2478 bits (173), Expect = 1.272e-14 Identity = 30/42 (71.43%), Postives = 34/42 (80.95%), Query Frame = 0 Query: 43 LHPEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 +H E+ + +EFDG VLCRVCGDKASGFHYGVHSCEGCK Sbjct: 28 VHREREPELHIEFDGT-TVLCRVCGDKASGFHYGVHSCEGCK 68
BLAST of EMLSAG00000006006 vs. SwissProt
Match: gi|71153514|sp|P17671.2|E75BC_DROME (RecName: Full=Ecdysone-induced protein 75B, isoforms C/D; AltName: Full=E75-A; AltName: Full=Nuclear receptor subfamily 1 group D member 3, isoforms C/D) HSP 1 Score: 68.1662 bits (165), Expect = 1.482e-13 Identity = 35/75 (46.67%), Postives = 46/75 (61.33%), Query Frame = 0 Query: 11 FHTLGSIKMEKRD-KDETNVYTSSSDLLLSPLSLHPEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 H G I + D + +T Y S ++ + ++ + + +EFDG VLCRVCGDKASGFHYGVHSCEGCK Sbjct: 193 LHHSGGIAVVPADSRPQTPEYIKSYPVMDTTVASSVKGEPELNIEFDGT-TVLCRVCGDKASGFHYGVHSCEGCK 266
BLAST of EMLSAG00000006006 vs. SwissProt
Match: gi|71153513|sp|P13055.2|E75BB_DROME (RecName: Full=Ecdysone-induced protein 75B, isoform B; AltName: Full=E75-C; AltName: Full=Nuclear receptor subfamily 1 group D member 3, isoform B) HSP 1 Score: 67.781 bits (164), Expect = 2.018e-13 Identity = 29/32 (90.62%), Postives = 29/32 (90.62%), Query Frame = 0 Query: 53 LEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 LEFDG VLCRVCGDKASGFHYGVHSCEGCK Sbjct: 449 LEFDGT-TVLCRVCGDKASGFHYGVHSCEGCK 479
BLAST of EMLSAG00000006006 vs. SwissProt
Match: gi|6015045|sp|O77245.1|E75_METEN (RecName: Full=Nuclear hormone receptor E75; AltName: Full=Nuclear receptor subfamily 1 group D member 3) HSP 1 Score: 66.6254 bits (161), Expect = 5.574e-13 Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = 0 Query: 50 RIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 + ++EFDG VLCRVCGDKASGFHYGVHSCEGCK Sbjct: 20 KTVIEFDGT-TVLCRVCGDKASGFHYGVHSCEGCK 53
BLAST of EMLSAG00000006006 vs. SwissProt
Match: gi|119100|sp|P20393.1|NR1D1_HUMAN (RecName: Full=Nuclear receptor subfamily 1 group D member 1; AltName: Full=Rev-erbA-alpha; AltName: Full=V-erbA-related protein 1; Short=EAR-1) HSP 1 Score: 58.151 bits (139), Expect = 4.402e-10 Identity = 29/60 (48.33%), Postives = 39/60 (65.00%), Query Frame = 0 Query: 45 PEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK-------LKKIECNKSLKDE 97 P KS+ I + +G +LC+VCGD ASGFHYGVH+CEGCK + I+ + LK+E Sbjct: 115 PSKSTSNITKLNGM-VLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNE 173
BLAST of EMLSAG00000006006 vs. SwissProt
Match: gi|263504928|sp|B3SV56.1|NR1D1_SHEEP (RecName: Full=Nuclear receptor subfamily 1 group D member 1; AltName: Full=Rev-erbA-alpha; AltName: Full=V-erbA-related protein 1; Short=EAR-1) HSP 1 Score: 58.151 bits (139), Expect = 5.043e-10 Identity = 29/60 (48.33%), Postives = 39/60 (65.00%), Query Frame = 0 Query: 45 PEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK-------LKKIECNKSLKDE 97 P KS+ I + +G +LC+VCGD ASGFHYGVH+CEGCK + I+ + LK+E Sbjct: 116 PSKSTSNITKLNGM-VLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNE 174
BLAST of EMLSAG00000006006 vs. SwissProt
Match: gi|122132423|sp|Q08E02.1|NR1D1_BOVIN (RecName: Full=Nuclear receptor subfamily 1 group D member 1; AltName: Full=Rev-erbA-alpha; AltName: Full=V-erbA-related protein 1; Short=EAR-1) HSP 1 Score: 57.7658 bits (138), Expect = 5.778e-10 Identity = 29/60 (48.33%), Postives = 39/60 (65.00%), Query Frame = 0 Query: 45 PEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK-------LKKIECNKSLKDE 97 P KS+ I + +G +LC+VCGD ASGFHYGVH+CEGCK + I+ + LK+E Sbjct: 116 PSKSTSNITKLNGM-VLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNE 174
BLAST of EMLSAG00000006006 vs. SwissProt
Match: gi|13431789|sp|O18971.1|PPARG_BOVIN (RecName: Full=Peroxisome proliferator-activated receptor gamma; Short=PPAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group C member 3) HSP 1 Score: 56.6102 bits (135), Expect = 1.766e-9 Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 0 Query: 63 CRVCGDKASGFHYGVHSCEGCK 84 CRVCGDKASGFHYGVH+CEGCK Sbjct: 139 CRVCGDKASGFHYGVHACEGCK 160
BLAST of EMLSAG00000006006 vs. Select Arthropod Genomes
Match: ALI30484.1 (Ecdysone-induced protein 75B, isoform G [Drosophila melanogaster]) HSP 1 Score: 68.9366 bits (167), Expect = 4.461e-14 Identity = 29/35 (82.86%), Postives = 31/35 (88.57%), Query Frame = 0 Query: 50 RIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 R++ EFDG VLCRVCGDKASGFHYGVHSCEGCK Sbjct: 25 RVLAEFDGT-TVLCRVCGDKASGFHYGVHSCEGCK 58
BLAST of EMLSAG00000006006 vs. Select Arthropod Genomes
Match: XP_006564383.1 (PREDICTED: ecdysone-induced protein 75 isoform X3 [Apis mellifera]) HSP 1 Score: 68.5514 bits (166), Expect = 5.184e-14 Identity = 33/42 (78.57%), Postives = 34/42 (80.95%), Query Frame = 0 Query: 44 HPEKSSRII-LEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 H E +S I LEFDG VLCRVCGDKASGFHYGVHSCEGCK Sbjct: 54 HEEPTSSIPDLEFDGT-TVLCRVCGDKASGFHYGVHSCEGCK 94
BLAST of EMLSAG00000006006 vs. Select Arthropod Genomes
Match: XP_006564381.2 (PREDICTED: ecdysone-induced protein 75 isoform X1 [Apis mellifera]) HSP 1 Score: 68.5514 bits (166), Expect = 5.545e-14 Identity = 30/41 (73.17%), Postives = 33/41 (80.49%), Query Frame = 0 Query: 44 HPEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 +PE+ + EFDG VLCRVCGDKASGFHYGVHSCEGCK Sbjct: 43 NPERRHLRVKEFDGT-TVLCRVCGDKASGFHYGVHSCEGCK 82
BLAST of EMLSAG00000006006 vs. Select Arthropod Genomes
Match: NP_001073579.1 (ecdysone-induced protein 75 [Apis mellifera]) HSP 1 Score: 68.1662 bits (165), Expect = 6.804e-14 Identity = 29/35 (82.86%), Postives = 31/35 (88.57%), Query Frame = 0 Query: 50 RIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 R++ EFDG VLCRVCGDKASGFHYGVHSCEGCK Sbjct: 55 RVLAEFDGT-TVLCRVCGDKASGFHYGVHSCEGCK 88
BLAST of EMLSAG00000006006 vs. Select Arthropod Genomes
Match: AAN11687.1 (Ecdysone-induced protein 75B, isoform C [Drosophila melanogaster]) HSP 1 Score: 68.1662 bits (165), Expect = 7.184e-14 Identity = 35/75 (46.67%), Postives = 46/75 (61.33%), Query Frame = 0 Query: 11 FHTLGSIKMEKRD-KDETNVYTSSSDLLLSPLSLHPEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 H G I + D + +T Y S ++ + ++ + + +EFDG VLCRVCGDKASGFHYGVHSCEGCK Sbjct: 193 LHHSGGIAVVPADSRPQTPEYIKSYPVMDTTVASSVKGEPELNIEFDGT-TVLCRVCGDKASGFHYGVHSCEGCK 266
BLAST of EMLSAG00000006006 vs. Select Arthropod Genomes
Match: gb|KYB25584.1| (Ecdysone-induced protein 75B, isoforms C/D-like Protein [Tribolium castaneum]) HSP 1 Score: 67.781 bits (164), Expect = 9.693e-14 Identity = 29/35 (82.86%), Postives = 31/35 (88.57%), Query Frame = 0 Query: 50 RIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 R++ EFDG VLCRVCGDKASGFHYGVHSCEGCK Sbjct: 81 RVLAEFDGT-TVLCRVCGDKASGFHYGVHSCEGCK 114
BLAST of EMLSAG00000006006 vs. Select Arthropod Genomes
Match: AFH04493.1 (Ecdysone-induced protein 75B, isoform F [Drosophila melanogaster]) HSP 1 Score: 67.781 bits (164), Expect = 9.780e-14 Identity = 29/32 (90.62%), Postives = 29/32 (90.62%), Query Frame = 0 Query: 53 LEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 LEFDG VLCRVCGDKASGFHYGVHSCEGCK Sbjct: 449 LEFDGT-TVLCRVCGDKASGFHYGVHSCEGCK 479
BLAST of EMLSAG00000006006 vs. Select Arthropod Genomes
Match: AFH04492.1 (Ecdysone-induced protein 75B, isoform E [Drosophila melanogaster]) HSP 1 Score: 67.781 bits (164), Expect = 9.780e-14 Identity = 29/32 (90.62%), Postives = 29/32 (90.62%), Query Frame = 0 Query: 53 LEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 LEFDG VLCRVCGDKASGFHYGVHSCEGCK Sbjct: 449 LEFDGT-TVLCRVCGDKASGFHYGVHSCEGCK 479
BLAST of EMLSAG00000006006 vs. Select Arthropod Genomes
Match: AAF49282.3 (Ecdysone-induced protein 75B, isoform B [Drosophila melanogaster]) HSP 1 Score: 67.781 bits (164), Expect = 9.780e-14 Identity = 29/32 (90.62%), Postives = 29/32 (90.62%), Query Frame = 0 Query: 53 LEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 LEFDG VLCRVCGDKASGFHYGVHSCEGCK Sbjct: 449 LEFDGT-TVLCRVCGDKASGFHYGVHSCEGCK 479
BLAST of EMLSAG00000006006 vs. Select Arthropod Genomes
Match: gb|KFM60432.1| (Nuclear hormone receptor E75, partial [Stegodyphus mimosarum]) HSP 1 Score: 67.0106 bits (162), Expect = 1.986e-13 Identity = 34/52 (65.38%), Postives = 38/52 (73.08%), Query Frame = 0 Query: 36 LLLSPLSLHPEKSSR---IILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 LL S + PE+ R + +EFDG VLCRVCGDKASGFHYGVHSCEGCK Sbjct: 10 LLSSMPAFVPEQEKRENDLKIEFDGT-TVLCRVCGDKASGFHYGVHSCEGCK 60
BLAST of EMLSAG00000006006 vs. nr
Match: gi|1042761285|gb|ANQ45197.1| (ecdysone-induced protein E75a [Lepeophtheirus salmonis salmonis]) HSP 1 Score: 131.724 bits (330), Expect = 1.990e-33 Identity = 62/84 (73.81%), Postives = 72/84 (85.71%), Query Frame = 0 Query: 1 MNSVKDDKVYFHTLGSIKMEKRDKDETNVYTSSSDLLLSPLSLHPEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 M+S++ DKV FHT SIKM++ +DETNVYTS+S+ PLS+ PEKS+R ILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK Sbjct: 1 MHSMRGDKVAFHTPESIKMKRGGEDETNVYTSTSE---PPLSISPEKSARTILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 81
BLAST of EMLSAG00000006006 vs. nr
Match: gi|657600330|gb|AID52826.1| (ecdysone-induced protein 75A [Tigriopus japonicus]) HSP 1 Score: 79.337 bits (194), Expect = 4.099e-15 Identity = 34/37 (91.89%), Postives = 34/37 (91.89%), Query Frame = 0 Query: 48 SSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 S R ILEFD NDQVLCRVCGDKASGFHYGVHSCEGCK Sbjct: 82 SGRTILEFDNNDQVLCRVCGDKASGFHYGVHSCEGCK 118
BLAST of EMLSAG00000006006 vs. nr
Match: gi|955475062|gb|ALP82428.1| (ecdysone inducible 75A, partial [Omphisa fuscidentalis]) HSP 1 Score: 72.4034 bits (176), Expect = 9.228e-14 Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 0 Query: 37 LLSPLSLHPEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 ++SP+++ E+ + +EFDG VLCRVCGDKASGFHYGVHSCEGCK Sbjct: 18 IMSPVTVRKEREPELHIEFDGTT-VLCRVCGDKASGFHYGVHSCEGCK 64
BLAST of EMLSAG00000006006 vs. nr
Match: gi|162951899|ref|NP_001106079.1| (nuclear hormone receptor E75 isoform A [Bombyx mori] >gi|6683592|dbj|BAA89262.1| nuclear hormone receptor E75 A [Bombyx mori]) HSP 1 Score: 74.7146 bits (182), Expect = 1.766e-13 Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 0 Query: 28 NVYTSSSDLLLSPLSLHPEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 +V TS L+S S+H E+ + +EFDG VLCRVCGDKASGFHYGVHSCEGCK Sbjct: 11 DVPTSVDHSLMS--SMHKEREPELHIEFDGT-TVLCRVCGDKASGFHYGVHSCEGCK 64
BLAST of EMLSAG00000006006 vs. nr
Match: gi|18033299|gb|AAL57047.1|AF332550_1 (orphan nuclear receptor E75A [Bombyx mori]) HSP 1 Score: 74.7146 bits (182), Expect = 1.818e-13 Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 0 Query: 28 NVYTSSSDLLLSPLSLHPEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 +V TS L+S S+H E+ + +EFDG VLCRVCGDKASGFHYGVHSCEGCK Sbjct: 11 DVPTSVDHSLMS--SMHKEREPELHIEFDGT-TVLCRVCGDKASGFHYGVHSCEGCK 64
BLAST of EMLSAG00000006006 vs. nr
Match: gi|45925833|gb|AAS79101.1| (transcription factor E75A, partial [Plodia interpunctella]) HSP 1 Score: 70.0922 bits (170), Expect = 2.232e-13 Identity = 33/54 (61.11%), Postives = 41/54 (75.93%), Query Frame = 0 Query: 31 TSSSDLLLSPLSLHPEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 T + + ++SP+ H E+ + +EFDG VLCRVCGDKASGFHYGVHSCEGCK Sbjct: 18 TPTDNRMMSPV--HKEREPELHIEFDGTT-VLCRVCGDKASGFHYGVHSCEGCK 68
BLAST of EMLSAG00000006006 vs. nr
Match: gi|657600334|gb|AID52828.1| (ecdysone-induced protein 75B [Tigriopus japonicus]) HSP 1 Score: 73.9442 bits (180), Expect = 2.944e-13 Identity = 31/36 (86.11%), Postives = 33/36 (91.67%), Query Frame = 0 Query: 49 SRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 +R +EFD NDQVLCRVCGDKASGFHYGVHSCEGCK Sbjct: 190 NRSDIEFDNNDQVLCRVCGDKASGFHYGVHSCEGCK 225
BLAST of EMLSAG00000006006 vs. nr
Match: gi|914577933|gb|KOB79520.1| (Orphan nuclear receptor E75A [Operophtera brumata]) HSP 1 Score: 73.9442 bits (180), Expect = 3.109e-13 Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 0 Query: 37 LLSPLSLHPEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCKLK 86 L+SP H E+ + +EFDG VLCRVCGDKASGFHYGVHSCEGCKL+ Sbjct: 24 LMSPA--HKEREPELHIEFDGT-TVLCRVCGDKASGFHYGVHSCEGCKLR 70
BLAST of EMLSAG00000006006 vs. nr
Match: gi|913328762|ref|XP_013195909.1| (PREDICTED: ecdysone-inducible protein E75 isoform X2 [Amyelois transitella]) HSP 1 Score: 73.9442 bits (180), Expect = 3.667e-13 Identity = 33/54 (61.11%), Postives = 40/54 (74.07%), Query Frame = 0 Query: 31 TSSSDLLLSPLSLHPEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 T + ++SP+ H E+ + +EFDG VLCRVCGDKASGFHYGVHSCEGCK Sbjct: 18 TPTDSRMMSPV--HKEREPELHIEFDGT-TVLCRVCGDKASGFHYGVHSCEGCK 68
BLAST of EMLSAG00000006006 vs. nr
Match: gi|930649165|gb|KPI91513.1| (Ecdysone-inducible protein E75 [Papilio xuthus]) HSP 1 Score: 71.633 bits (174), Expect = 4.020e-13 Identity = 34/47 (72.34%), Postives = 37/47 (78.72%), Query Frame = 0 Query: 51 IILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCKLK-KIECNKSLKD 96 IILEFDG VLCRVCGDKASGFHYGVHSCEGCK + +IE + D Sbjct: 62 IILEFDGTT-VLCRVCGDKASGFHYGVHSCEGCKERARIEVGRDATD 107
BLAST of EMLSAG00000006006 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold106_size358372-snap-gene-1.13 (protein:Tk03536 transcript:maker-scaffold106_size358372-snap-gene-1.13-mRNA-1 annotation:"ecdysone-inducible protein e75 isoform x3") HSP 1 Score: 57.7658 bits (138), Expect = 2.111e-11 Identity = 23/23 (100.00%), Postives = 23/23 (100.00%), Query Frame = 0 Query: 62 LCRVCGDKASGFHYGVHSCEGCK 84 LCRVCGDKASGFHYGVHSCEGCK Sbjct: 1 LCRVCGDKASGFHYGVHSCEGCK 23
BLAST of EMLSAG00000006006 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold192_size271026-snap-gene-1.22 (protein:Tk07205 transcript:maker-scaffold192_size271026-snap-gene-1.22-mRNA-1 annotation:"retinoid x receptor") HSP 1 Score: 47.7506 bits (112), Expect = 7.586e-8 Identity = 17/23 (73.91%), Postives = 20/23 (86.96%), Query Frame = 0 Query: 62 LCRVCGDKASGFHYGVHSCEGCK 84 C +CGD+ASG HYGV+SCEGCK Sbjct: 67 FCSICGDRASGKHYGVYSCEGCK 89
BLAST of EMLSAG00000006006 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold524_size146631-snap-gene-0.27 (protein:Tk03332 transcript:maker-scaffold524_size146631-snap-gene-0.27-mRNA-1 annotation:"steroid receptor seven- isoforms b c-like") HSP 1 Score: 47.3654 bits (111), Expect = 1.208e-7 Identity = 27/53 (50.94%), Postives = 35/53 (66.04%), Query Frame = 0 Query: 38 LSPLS--LHPEKSSRIILEFDG-NDQ---VLCRVCGDKASGFHYGVHSCEGCK 84 L+P+S +HP + S I E G ND ++C VCGDK+SG HYG +CEGCK Sbjct: 63 LTPMSTTVHPPQESSISSEESGKNDDCQDIICVVCGDKSSGKHYGQFTCEGCK 115 HSP 2 Score: 45.4394 bits (106), Expect = 5.607e-7 Identity = 20/34 (58.82%), Postives = 25/34 (73.53%), Query Frame = 0 Query: 51 IILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 II + +G D + C VCGDK+SG HYG +CEGCK Sbjct: 459 IIKDENGQD-ISCVVCGDKSSGKHYGQFTCEGCK 491
BLAST of EMLSAG00000006006 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1331_size47282-snap-gene-0.8 (protein:Tk00449 transcript:maker-scaffold1331_size47282-snap-gene-0.8-mRNA-1 annotation:"hormone receptor") HSP 1 Score: 46.595 bits (109), Expect = 2.302e-7 Identity = 17/22 (77.27%), Postives = 20/22 (90.91%), Query Frame = 0 Query: 63 CRVCGDKASGFHYGVHSCEGCK 84 C+VCGDK+SG HYGV +CEGCK Sbjct: 74 CKVCGDKSSGVHYGVITCEGCK 95
BLAST of EMLSAG00000006006 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold329_size204955-snap-gene-0.15 (protein:Tk00268 transcript:maker-scaffold329_size204955-snap-gene-0.15-mRNA-1 annotation:"hypothetical protein DAPPUDRAFT_311954") HSP 1 Score: 45.0542 bits (105), Expect = 6.212e-7 Identity = 17/22 (77.27%), Postives = 20/22 (90.91%), Query Frame = 0 Query: 63 CRVCGDKASGFHYGVHSCEGCK 84 C+VCGDK+SG HYGV +CEGCK Sbjct: 45 CKVCGDKSSGVHYGVITCEGCK 66
BLAST of EMLSAG00000006006 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1296_size49803-snap-gene-0.14 (protein:Tk08819 transcript:maker-scaffold1296_size49803-snap-gene-0.14-mRNA-1 annotation:"nuclear hormone receptor ftz-f1 beta") HSP 1 Score: 45.0542 bits (105), Expect = 6.621e-7 Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 0 Query: 63 CRVCGDKASGFHYGVHSCEGCK 84 C VCGDK SGFHYG+ SCE CK Sbjct: 633 CPVCGDKISGFHYGIFSCESCK 654
BLAST of EMLSAG00000006006 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold80_size398941-processed-gene-2.10 (protein:Tk02829 transcript:snap_masked-scaffold80_size398941-processed-gene-2.10-mRNA-1 annotation:"GI11566") HSP 1 Score: 44.669 bits (104), Expect = 8.542e-7 Identity = 17/33 (51.52%), Postives = 22/33 (66.67%), Query Frame = 0 Query: 52 ILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 I + D LCRVC + A+GFH+G +CEGCK Sbjct: 27 IDKLDPMQNQLCRVCSEPAAGFHFGAFTCEGCK 59
BLAST of EMLSAG00000006006 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold106_size358372-processed-gene-0.6 (protein:Tk03534 transcript:snap_masked-scaffold106_size358372-processed-gene-0.6-mRNA-1 annotation:"ecdysone receptor") HSP 1 Score: 44.669 bits (104), Expect = 9.030e-7 Identity = 16/23 (69.57%), Postives = 19/23 (82.61%), Query Frame = 0 Query: 62 LCRVCGDKASGFHYGVHSCEGCK 84 LC VCGD+ASG+HY +CEGCK Sbjct: 175 LCTVCGDRASGYHYNALACEGCK 197
BLAST of EMLSAG00000006006 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold1253_size52701-processed-gene-0.0 (protein:Tk01373 transcript:snap_masked-scaffold1253_size52701-processed-gene-0.0-mRNA-1 annotation:"ecdysone receptor") HSP 1 Score: 44.669 bits (104), Expect = 9.030e-7 Identity = 16/23 (69.57%), Postives = 19/23 (82.61%), Query Frame = 0 Query: 62 LCRVCGDKASGFHYGVHSCEGCK 84 LC VCGD+ASG+HY +CEGCK Sbjct: 175 LCTVCGDRASGYHYNALACEGCK 197
BLAST of EMLSAG00000006006 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1013_size70870-snap-gene-0.16 (protein:Tk07036 transcript:maker-scaffold1013_size70870-snap-gene-0.16-mRNA-1 annotation:"transcription factor hnf-4 homolog") HSP 1 Score: 44.669 bits (104), Expect = 9.631e-7 Identity = 20/66 (30.30%), Postives = 38/66 (57.58%), Query Frame = 0 Query: 19 MEKRDKDETNVYTSSSDLLLSPLSLHPEKSSRIILEFDGNDQVLCRVCGDKASGFHYGVHSCEGCK 84 M+ + + + +S++++ S + H +++ +L + C +CGDKA+G HYG SC+GCK Sbjct: 162 MDSSSSNPMDNHLASTEVVTSLEATHSPEANGNVLPMN------CAICGDKATGKHYGAASCDGCK 221 The following BLAST results are available for this feature:
BLAST of EMLSAG00000006006 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000006006 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000006006 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 6
BLAST of EMLSAG00000006006 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 25
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BLAST of EMLSAG00000006006 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 25
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BLAST of EMLSAG00000006006 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000006006 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 10
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s3269:8822..10816+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000006006-688772 ID=EMLSAG00000006006-688772|Name=EMLSAG00000006006|organism=Lepeophtheirus salmonis|type=gene|length=1995bp|location=Sequence derived from alignment at LSalAtl2s3269:8822..10816+ (Lepeophtheirus salmonis)back to top Add to Basket
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