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Associated RNAi Experiments
Homology
BLAST of EMLSAG00000006429 vs. L. salmonis peptides
Match: EMLSAP00000006429 (pep:novel supercontig:LSalAtl2s:LSalAtl2s351:365917:371969:1 gene:EMLSAG00000006429 transcript:EMLSAT00000006429 description:"maker-LSalAtl2s351-augustus-gene-3.8") HSP 1 Score: 1583.93 bits (4100), Expect = 0.000e+0 Identity = 773/773 (100.00%), Postives = 773/773 (100.00%), Query Frame = 0
Query: 1 MMINPETSFLKSIQHDNATPLWSGYVVWANYHLDVNVFPRSRNSHLNEWGSSNAKXLFSRNPRIQYNADFIVNIQIIYTKPSSSWNSSSAPLITEEVKNAFFGDSSSRQSVHIVMKMTSTSSHFVSHIEATNAYISGFAFVPAQKGEAHMPLHPLRPLVIDLNTEKVVRCGEYFYFKAWILNENFILPFYKYACLKNEPVMNSSPHPLGVPFHTPHHPPPSGXPPYYSPSMSRALPSPYSKLQSHFQSSSSSGGPSSSASNFYDLLHRQQSQQQTTETTNKYIQNSVQKPSQSSVIKPIAMYPYHDSSQNSAIHFRPDQQSMKDFKKKPNFSSDSVFKAHLQSGRSYSGPSERFHPSQSDSPDKKLSNLLNLKTRASHSPQTSPPPLSSQPNNSKTNERETTTKCEKYLSEFVNTLFSWQEDINQTLNLLDKVVPLLISSEYEDKILLEKVHDLFNTFYKGQKGNIPQEYEKWEVKIELQFANTLKKCPYNFKQDLATHLLKERDTLLMNQKKKERKLKKRIFEATIKTEEHTMKRKTIGVFSGNFNEKLVHFNTVILENVSVPPSFNYNFFSNLYCLFIAKDISLFPWDKWKDNKVLISTSHSKMSAAFYLDDSNSSQFNLPVKFMEHSEDFHNYISTEKDSHSSTEKKACLISFTNFYHYFQKIEKVFKIEPLITWKPIIFSKXPGCASASSTSTSSSQMSAIQKSKEQDPFYGLLMTVFGNRVYGLSYRKRIKLKFEFGERNSLIYHALIFNNNIVFISEETAXEFFVGD 773
MMINPETSFLKSIQHDNATPLWSGYVVWANYHLDVNVFPRSRNSHLNEWGSSNAKXLFSRNPRIQYNADFIVNIQIIYTKPSSSWNSSSAPLITEEVKNAFFGDSSSRQSVHIVMKMTSTSSHFVSHIEATNAYISGFAFVPAQKGEAHMPLHPLRPLVIDLNTEKVVRCGEYFYFKAWILNENFILPFYKYACLKNEPVMNSSPHPLGVPFHTPHHPPPSGXPPYYSPSMSRALPSPYSKLQSHFQSSSSSGGPSSSASNFYDLLHRQQSQQQTTETTNKYIQNSVQKPSQSSVIKPIAMYPYHDSSQNSAIHFRPDQQSMKDFKKKPNFSSDSVFKAHLQSGRSYSGPSERFHPSQSDSPDKKLSNLLNLKTRASHSPQTSPPPLSSQPNNSKTNERETTTKCEKYLSEFVNTLFSWQEDINQTLNLLDKVVPLLISSEYEDKILLEKVHDLFNTFYKGQKGNIPQEYEKWEVKIELQFANTLKKCPYNFKQDLATHLLKERDTLLMNQKKKERKLKKRIFEATIKTEEHTMKRKTIGVFSGNFNEKLVHFNTVILENVSVPPSFNYNFFSNLYCLFIAKDISLFPWDKWKDNKVLISTSHSKMSAAFYLDDSNSSQFNLPVKFMEHSEDFHNYISTEKDSHSSTEKKACLISFTNFYHYFQKIEKVFKIEPLITWKPIIFSKXPGCASASSTSTSSSQMSAIQKSKEQDPFYGLLMTVFGNRVYGLSYRKRIKLKFEFGERNSLIYHALIFNNNIVFISEETAXEFFVGD
Sbjct: 1 MMINPETSFLKSIQHDNATPLWSGYVVWANYHLDVNVFPRSRNSHLNEWGSSNAKXLFSRNPRIQYNADFIVNIQIIYTKPSSSWNSSSAPLITEEVKNAFFGDSSSRQSVHIVMKMTSTSSHFVSHIEATNAYISGFAFVPAQKGEAHMPLHPLRPLVIDLNTEKVVRCGEYFYFKAWILNENFILPFYKYACLKNEPVMNSSPHPLGVPFHTPHHPPPSGXPPYYSPSMSRALPSPYSKLQSHFQSSSSSGGPSSSASNFYDLLHRQQSQQQTTETTNKYIQNSVQKPSQSSVIKPIAMYPYHDSSQNSAIHFRPDQQSMKDFKKKPNFSSDSVFKAHLQSGRSYSGPSERFHPSQSDSPDKKLSNLLNLKTRASHSPQTSPPPLSSQPNNSKTNERETTTKCEKYLSEFVNTLFSWQEDINQTLNLLDKVVPLLISSEYEDKILLEKVHDLFNTFYKGQKGNIPQEYEKWEVKIELQFANTLKKCPYNFKQDLATHLLKERDTLLMNQKKKERKLKKRIFEATIKTEEHTMKRKTIGVFSGNFNEKLVHFNTVILENVSVPPSFNYNFFSNLYCLFIAKDISLFPWDKWKDNKVLISTSHSKMSAAFYLDDSNSSQFNLPVKFMEHSEDFHNYISTEKDSHSSTEKKACLISFTNFYHYFQKIEKVFKIEPLITWKPIIFSKXPGCASASSTSTSSSQMSAIQKSKEQDPFYGLLMTVFGNRVYGLSYRKRIKLKFEFGERNSLIYHALIFNNNIVFISEETAXEFFVGD 773
The following BLAST results are available for this feature:
BLAST of EMLSAG00000006429 vs. GO
Analysis Date: 2014-04-02 ( Blast vs. GO)
Total hits: 0
| Match Name | E-value | Identity | Description | |
|---|
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BLAST of EMLSAG00000006429 vs. L. salmonis peptides
Analysis Date: 2014-05-10 ( Blastp vs. self)
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| EMLSAP00000006429 | 0.000e+0 | 100.00 | pep:novel supercontig:LSalAtl2s:LSalAtl2s351:36591... | [more] |
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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s351 | supercontig | LSalAtl2s351:365917..371969 + |
Analyses
This gene is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Description | maker-LSalAtl2s351-augustus-gene-3.8 |
| Biotype | protein_coding |
| Evidence | IEA |
| Note | Hypothetical protein |
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s351:365917..371969+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAG00000006429-689195 ID=EMLSAG00000006429-689195|Name=EMLSAG00000006429|organism=Lepeophtheirus salmonis|type=gene|length=6053bp|location=Sequence derived from alignment at LSalAtl2s351:365917..371969+ (Lepeophtheirus salmonis)
GCTATAATGATGATTAATCCTGAAACCTCCTTTTTGAAGTCCATTCAACA
TGATAATGCTACACCCTTATGGAGCGGATATGTGGTTTGGGCCAACTATC
ACTTGGATGTGAACGTATTCCCTCGCTCAAGGAACTCTCATTTGAACGAA
TGGGGAAGCTCTAATGCCAAGGKCCTTTTCTCTCGTAACCCGAGAATCCA
ATACAATGCAGACTTTATTGTCAATATTCAAATAATATATACTAAACCAT
CATCATCATGGAATTCATCCAGTGCCCCTTTGATCACGGAGGAAGTCAAA
AATGCCTTCTTTGGAGACTCCTCCTCCAGACAGTCTGTTCATATTGTCAT
GAAAATGACGTCCACTTCAAGTCATTTTGTATCACATATCGAGGCTACGA
ATGCTTACATATCCGGATTTGCATTCGTTCCTGCTCAAAAAGGAGAGGCA
CACATGCCGCTTCATCCTCTTCGACCTCTGGTCATAGATTTGAACACTGA
GAAGGTTGTACGTTGTGGGGAATACTTTTATTTCAAGGCCTGGATCTTGA
ATGAAAACTTCATTCTTCCCTTCTATAAATATGCTTGCCTCAAAAATGAG
CCTGTTATGAATTCCTCTCCTCATCCTTTAGGTGTTCCTTTTCATACGCC
ACACCATCCTCCACCCTCAGGATTKCCGCCATACTATAGTCCGAGTATGT
CACGAGCTTTACCTTCTCCTTACAGCAAACTTCAGTCTCATTTCCAAAGT
TCCAGTAGCAGTGGTGGGCCAAGCAGCAGTGCTAGCAACTTTTATGATCT
GCTTCACCGGCAACAAAGTCAACAACAAACTACTGAAACTACCAATAAAT
ACATTCAAAATTCAGTACAAAAACCATCTCAATCCTCTGTGATAAAACCT
ATTGCAATGTATCCCTATCACGATTCCTCGCAAAACAGTGCCATTCACTT
CCGCCCGGATCAACAAAGCATGAAAGATTTTAAAAAAAAACCTAATTTTA
GCTCAGACTCTGTATTTAAGGCGCATTTACAAAGTGGAAGATCATATTCT
GGTCCGAGCGAGAGATTTCATCCAAGTCAAAGTGATTCTCCGGATAAAAA
GCTATCCAATTTACGTATTTATTCTCCTAAGGGACCAKCCGCCACATCCT
CTCATCAACATCAAGAGAGAACTTCCAATAATAGTCCTGGTGAGTAATAC
ATCATATTTACATATAGTCAAGATTAATAGAAATACAAGGTTATACCATA
ACACTTTTCCGACTGATGTTTGACTTCCACCACGCTTTTTAATAGTGACG
TCAAGGAGTATGACTGTTATCAAGAGTAGCGATATATCCCCTTTTGACTG
TTACTGTTAGAGTACTGCTGTTTATACTCTATGACGTTAAAATATGTCTG
TCTTTCCTATCAGTCGGTAGGCTACATAAAATGGATAATTATATCCTTCC
CGATTTCATGATGGTCTAATCTTGTATTTCTATTAGTCTTGCATATAGTG
TTCTGTCGCTCAAGTCCAGTCCAGTCTGGGACGACTCCCTTAATACAAAT
GAATAATATAAATTCATAACAAAGAAACACCTCAATGATGTTACGAAGGC
TACAGGTATTTTTTAAGGACTAAAAAGTGGGACTGGACGAGACCTAACCG
AACCAATCTGGGAGGAGGCACGGTCTTAGATAAGGTCCGACACAACATTT
CAATATTATAAAGTAACGCATTGATCGGACTCTTCAAAAATTAAGGCAGC
ATGGACCGAGTGTACCACTTGTGGTTATTTCTTATGTRTTGTGATAACTT
YGTGAGGTCTGCTGTGCAGGGGCGTTGCTAKCTTTCARCATGGGGGGGGG
MCTAGCCCCAAAATTATCAACACCATTATATAATTACTTATATCACTAGC
TTATAGCTTAGATTTATATATAWAATTTNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACTCGTTTCAGCCCCAATTT
TTTTTTCTGTTCGGTTTGGTCTTGATTTTTCAAGACCAATTTGGATGGAT
TTTTCAAGACCGATTTGGATGGRTTTTTCAATCCAGACCGCAGTCTCAGA
CCGTAGACTGATTTTAATTAGGTCTCACATTATGGAGCGATTTTTTTCCG
GTCTCAATTTATGACCCTATTTTTTAGTCTCGTATATTATGAGAGACCAT
TTTTATTTCTAGATTAACTGTATTCAGTAATCGATAAGTTGTAGAACAAA
TACTGTATAAATATGAGAGACGGCGGGATCAAAATTAATCCGAGCCATTT
CTTTTTAAACTTCGTATAACGTCATTRTACTTGAAAAACATATGATGTCA
TGTTATAAACAATTTATCTGTAAAATGTGTCTAGACCCATATTTTGGGAC
CAAACTAGAGCGTATTTTTCCTTTGGATCGATCTAGACATCATTTGTATA
TGAGACCGGTTCGGAGCGAGCTTTTTTCTTGGACTGAATTAGTTCGGTCC
AAGAAAAATATATAACTGTCTCAGACCTTTGTAGCATTTCCAGACCGAAC
CCCAAATCTAATAGAAACATGCTTGATTATTTTATACGTCTACTCGCTAA
ATGTCAGACTGATTTGTTAAACTATTATAAATATATCCAAAATTTGATAC
AAAATTTAGGGGGCACCCCCTTCCCAAGGGAATAGGGATAGCACGTTCCC
CTGTGTGATAATGGCACAAGAAAACTAGATGGTGCAACGCATAAAAAAGA
GTGAAAACGTTACATCAAGGTCTTCAAATTAAATAATCATAAAGATTTAG
TTGTTAACTTATTTCTATTCTTATCTAAATATCACCTTTGAGTTGATTTG
TATCAGTATTTTTTTTTTGTCATTCAAAAACGTACAATAACTGTCGTTTT
TCACTTATTTCATGACTGAGTTTCGTATTGTATATATAATTGCATTGTTT
TGTTTCTGATCCAATATGACAATGATGAAAAATAATTACCTTTTTTCTTT
TTTTTATTGATATTTAGTTAACCTCAAAACAAGAGCTTCGCACTCTCCTC
AGACCTCTCCTCCCCCTTTGTCCTCCCAGCCTAATAATTCAAAAACTAAT
GAGAGGGAGACCACAACTAAATGCGAGAAGTACCTCTCTGAATTTGTAAA
CACTTTGTTTAGCTGGCAAGAAGACATAAATCAGACGTTGAATCTATTGG
ATAAAGTCGTTCCACTTTTGATCAGTTCCGAGTATGAAGATAAAATACTA
CTGGAAAAAGTTCATGACCTATTCAATACATTCTACAAAGGTCAAAAGGG
GAATATTCCACAAGAGTATGAAAAATGGGAAGTCAAAATAGAATTGCAAT
TTGCAAATACTCTAAAAAAGTGTCCATATAACTTTAAACAAGATTTAGCA
ACTCATTTACTGAAAGAAAGGGACACACTCCTTATGAATCAAAAGAAAAA
GGAACGGAAGCTCAAGAAAAGGATTTTTGAGGCCACTATTAAAACAGAGG
AGCATACGATGAAGCGAAAAACGATAGGAGTATTTTCTGGAAACTTTAAC
GAAAAACTGGTTCATTTCAATACTGTCATTTTGGAAAATGTTTCTGTTCC
TCCTAGCTTTAACTATAATTTTTTTTCAAATCTATATTGTCTATTTATCG
CAAAAGACATCTCTTTATTCCCTTGGGATAAATGGAAGGACAATAAAGTC
CTAATAAGCACTTCTCACTCGAAGATGAGCGCTGCTTTTTATTTGGATGA
CTCCAATTCAAGTCAGTTTAACCTTCCTGTAAAGTTTATGGAACATTCAG
AAGATTTTCATAATTACATATCTACGGAAAAAGACTCTCACAGTAGTACA
GAAAAAAAGGCTTGTCTCATAAGCTTCACCAACTTTTATCATTATTTTCA
AAAGATTGAAAAAGTCTTTAAAATTGAGCCTCTCATCACTTGGAAACCTA
TAATTTTTTCCAAGMCTCCAGGCTGTGCGTCCGCTTCTTCAACCTCAACT
TCTTCCTCGCAGATGAGTGCCATTCAAAAGAGTAAGGAACAAGATCCCTT
TTATGGATTACTCATGACGGTATTTGGAAATAGGGTCTATGGCTTATCCT
ACAGAAAAAGAATTAAGCTTAAATTTGAGTTTGGAGAGAGAAATTCCCTT
ATATATCATGCATTGATATTTAATAATAACATTGTGTTTATCTCCGAGGA
AACAGCCNTTGAATTTTTTGTTGGAGATTGATAACCTAATTTTTGGCTGT
GAGAGTTTTGAAACCTTTTTGATTAAAAACGATAGGATCCCCACTAATAG
CAATAGCGTGCTCAAGTTAAAAATCCCTATAACTTCCCGAAAAGTTCCTC
CGCCAAAGGACTCCCNNNNNNNNAACACTTCAATCATACCAAACGTCCTC
ATTAAAGCAAAGATATTGAATCACGAGCAGCTAAATAACTTAGAGTTCCT
TAAAAAGGAAATCTTTGAGGGAGAGTCATTTATCGTGGAACGGAAGCAAT
CTCTCATCATTTTTCAAAATACCTTAAAAGGTNNNNNNNCATATCAAATC
TGACGAAAACTATGATCACTCTTCTATTATTGACTTTCGAATGATGCGAA
AAATTCGTGCCATAGCCAAAATGAGGGTTGTAATACGGAACGTATATTAT
GACCTTATTATATTTTATTTCGTCTCCTTTATGAAGTCTGAAGGCTCTGA
ATTAGTGTTTGTGAATAATTCAGAGAATGAGATTATCGGAAGATCTATCG
ATGTCTTAATATCTCCACTGACTGAGAACACACAACGACTTGTTTCTAAG
TCCAACTTTTCATCCTCAGTGCTATTGACAAGAAAAGACAAATCAACATG
GGCCATGATCACGGATATAAACGAACCTATTCGTTGTATTAGCCGCATAA
TCATGCCTAATACATTTAAAAATATTATATGGGAGGCCATCAAATGTAAG
GACATGTTCTTTTCAGATATGGAGAACATTCGCTGTGCATTCTCTTCATC
CAATAAAGTATGCACAATTAAGTCATGGGAAAAGTTGTATGGAGTGGATG
ATCAGTCCTTTAAGGACTTGCATCAGAGCAAGGAAACGTTGGAGCCTTGG
GACAACAATTTTGACGCACCACAAAATCCAATCGAAGAACCCGTTAGAGA
AGAGAAAAAATATAAACGTCCCTCTAAAAAGAAATCGCAAGATGAGAAAT
ATTTCAAATCCTCTAAGAAAATGAAGGAGGATGAGATCATTATCGCAGAA
GTTGATGCCAAAAAAGAGGAAATCACGAATCCAATTAAAAAGCGAAAAAT
TGTTTTTCAAATCTTTGACAGAGGGGCAKCTCCGCCGCCGCCTGTTCTTT
CTCCTCCTCTTCTTATTAAGGAGGTAGAACAAAGGATGGTTGAGCCCAAT
GAACCCTATAATATCCTACAAAGCATACCTCTTAAAAAGAGACTGATTCG
AGCGAACTCTCCTTCTTCCACGCTTTCTTCCTCATCTCCGACTCTAACGA
TCGATATAGACGAGGAATACAATGACGTTGATGAGGATTTGAATGAAAAC
CTAATGCACATCAAAGATGAGCCCCATTTTTCTCCTAAAGTTATTATTCC
CGAACGGGATCGCATAGAAGCGGATAGTTACTTAAACCAAAGAGAGATTC
CAATTGCTGCCCAAGAGGATGATGAGGATGAAGAGGTCATCAATGTCATC
AAATGCATTGTGAGCGATATCGAACAAAGTGGGTCCACAAAATCCAATGA
TCAATGAAGACATATTCAAAACATTAGTCGTATTTAAAGTATCCCGGGTT
TTGCTCAATTAATGATTTTCTTTTAACTATATGTCTAACTAATTGGAGTA
TAAGTGTCATATCTTTATCTATTTAAGAGTTTATATTTGTGTTGAATTTT
TAAGATACCTATGGTTGTGTTATTAAGATAAATAAATTTATAATCATCGA
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