EMLSAG00000009136, EMLSAG00000009136-691902 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000009136 vs. C. finmarchicus
Match: gi|592919720|gb|GAXK01038655.1| (TSA: Calanus finmarchicus comp2483247_c0_seq1 transcribed RNA sequence) HSP 1 Score: 31.187 bits (69), Expect = 4.270e+0 Identity = 19/69 (27.54%), Postives = 29/69 (42.03%), Query Frame = 0 Query: 134 SLPKWRQSNVAILNTNERENYSRPLKSEHSKMRSLFNANDSLNDSGVRVFESNENNKSFQSPLPVKTRH 202 +P W N IL ++ E S+P+ EH +R+ + +S VF SN + P K H Sbjct: 73 GIPVWLVKNTRILTSH*NERCSKPVMVEHHSIRTGVSQVESYLGCSFHVFISNAHISDHHVPSYFKPGH 279
BLAST of EMLSAG00000009136 vs. C. finmarchicus
Match: gi|592863552|gb|GAXK01094010.1| (TSA: Calanus finmarchicus comp48117_c0_seq2 transcribed RNA sequence) HSP 1 Score: 30.0314 bits (66), Expect = 8.743e+0 Identity = 15/48 (31.25%), Postives = 19/48 (39.58%), Query Frame = 0 Query: 190 KSFQSPLPVKTRHKYFPLAC--------PLKIVTLHKGHFRNRCFNNL 229 K F +P H +FPL C P+ H H+R C N L Sbjct: 266 KCFHNPEKALILHNHFPLGCLGGVCRSYPVDTALAHLQHYRQDCVNTL 409
BLAST of EMLSAG00000009136 vs. C. finmarchicus
Match: gi|592863551|gb|GAXK01094011.1| (TSA: Calanus finmarchicus comp48117_c0_seq3 transcribed RNA sequence) HSP 1 Score: 30.0314 bits (66), Expect = 8.953e+0 Identity = 15/48 (31.25%), Postives = 19/48 (39.58%), Query Frame = 0 Query: 190 KSFQSPLPVKTRHKYFPLAC--------PLKIVTLHKGHFRNRCFNNL 229 K F +P H +FPL C P+ H H+R C N L Sbjct: 232 KCFHNPEKALILHNHFPLGCLGGVCRSYPVDTALAHLQHYRQDCVNTL 375
BLAST of EMLSAG00000009136 vs. L. salmonis peptides
Match: EMLSAP00000009136 (pep:novel supercontig:LSalAtl2s:LSalAtl2s575:148752:150615:1 gene:EMLSAG00000009136 transcript:EMLSAT00000009136 description:"maker-LSalAtl2s575-snap-gene-1.18") HSP 1 Score: 524.242 bits (1349), Expect = 0.000e+0 Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0 Query: 1 MAKETRMSKDNTVSEFYSCFKKYEGDSFDNPLEEFSKFPSENSSSYFSQGYIQPFLDCEAFRPTSDEVDMLNANMNKATTTANKCISKSEKVLKEENLLNKCVNTALFELSNEINRTNHSVNEVNPSNLPPGYSLPKWRQSNVAILNTNERENYSRPLKSEHSKMRSLFNANDSLNDSGVRVFESNENNKSFQSPLPVKTRHKYFPLACPLKIVTLHKGHFRNRCFNNLIPYFYIYSIANFRHGFIYISHCNVML 255 MAKETRMSKDNTVSEFYSCFKKYEGDSFDNPLEEFSKFPSENSSSYFSQGYIQPFLDCEAFRPTSDEVDMLNANMNKATTTANKCISKSEKVLKEENLLNKCVNTALFELSNEINRTNHSVNEVNPSNLPPGYSLPKWRQSNVAILNTNERENYSRPLKSEHSKMRSLFNANDSLNDSGVRVFESNENNKSFQSPLPVKTRHKYFPLACPLKIVTLHKGHFRNRCFNNLIPYFYIYSIANFRHGFIYISHCNVML Sbjct: 1 MAKETRMSKDNTVSEFYSCFKKYEGDSFDNPLEEFSKFPSENSSSYFSQGYIQPFLDCEAFRPTSDEVDMLNANMNKATTTANKCISKSEKVLKEENLLNKCVNTALFELSNEINRTNHSVNEVNPSNLPPGYSLPKWRQSNVAILNTNERENYSRPLKSEHSKMRSLFNANDSLNDSGVRVFESNENNKSFQSPLPVKTRHKYFPLACPLKIVTLHKGHFRNRCFNNLIPYFYIYSIANFRHGFIYISHCNVML 255 The following BLAST results are available for this feature:
BLAST of EMLSAG00000009136 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000009136 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 3
BLAST of EMLSAG00000009136 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000009136 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000009136 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000009136 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000009136 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s575:148752..150615+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000009136-691902 ID=EMLSAG00000009136-691902|Name=EMLSAG00000009136|organism=Lepeophtheirus salmonis|type=gene|length=1864bp|location=Sequence derived from alignment at LSalAtl2s575:148752..150615+ (Lepeophtheirus salmonis)back to top Add to Basket
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