EMLSAG00000009325, EMLSAG00000009325-692091 (gene) Lepeophtheirus salmonis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000009325 vs. GO
Match: - (symbol:HGFAC "Hepatocyte growth factor activator" species:9615 "Canis lupus familiaris" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA] InterPro:IPR000001 InterPro:IPR000083 InterPro:IPR000742 InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR014394 InterPro:IPR018114 Pfam:PF00008 Pfam:PF00039 Pfam:PF00089 PIRSF:PIRSF001146 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS01253 PROSITE:PS50026 PROSITE:PS50240 PROSITE:PS51091 SMART:SM00020 SMART:SM00181 GO:GO:0005615 GO:GO:0006508 GO:GO:0004252 InterPro:IPR013032 PROSITE:PS00022 SUPFAM:SSF50494 eggNOG:COG5640 Gene3D:2.40.20.10 InterPro:IPR013806 InterPro:IPR018056 Pfam:PF00051 SMART:SM00130 SUPFAM:SSF57440 PROSITE:PS00021 PROSITE:PS50070 Gene3D:2.10.10.10 InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS00023 PROSITE:PS51092 HOGENOM:HOG000237314 HOVERGEN:HBG004345 EMBL:AY532633 RefSeq:NP_001026985.1 UniGene:Cfa.134 ProteinModelPortal:Q6QNF4 SMR:Q6QNF4 STRING:9615.ENSCAFP00000021566 MEROPS:S01.228 GeneID:403432 KEGG:cfa:403432 CTD:3083 InParanoid:Q6QNF4 KO:K09631 NextBio:20816950 Uniprot:Q6QNF4) HSP 1 Score: 45.8246 bits (107), Expect = 7.008e-5 Identity = 21/47 (44.68%), Postives = 23/47 (48.94%), Query Frame = 0
Query: 25 TTDGHSCVFPFEYGNRKYTICTTVDKLGSPWCATYTPY-KHGYWGYC 70
T DG C FPF YG R CT+ WCAT Y + WGYC
Sbjct: 100 TVDGQPCRFPFRYGGRMLHACTSEGSAHRKWCATTHNYDRDRAWGYC 146
BLAST of EMLSAG00000009325 vs. GO
Match: - (symbol:MMP9 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0001501 "skeletal system development" evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0004222 "metalloendopeptidase activity" evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA] [GO:0007566 "embryo implantation" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030198 "extracellular matrix organization" evidence=IEA] [GO:0030574 "collagen catabolic process" evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA] [GO:0043065 "positive regulation of apoptotic process" evidence=IEA] [GO:0050900 "leukocyte migration" evidence=IEA] [GO:0051549 "positive regulation of keratinocyte migration" evidence=IEA] InterPro:IPR001818 InterPro:IPR006026 InterPro:IPR021158 InterPro:IPR021190 InterPro:IPR024079 InterPro:IPR028688 Pfam:PF00413 PRINTS:PR00138 PROSITE:PS00546 SMART:SM00235 InterPro:IPR002477 Pfam:PF01471 GO:GO:0005615 GO:GO:0006508 GO:GO:0008270 GO:GO:0007566 GO:GO:0030198 GO:GO:0043065 GO:GO:0001501 GO:GO:0004222 Gene3D:3.40.390.10 GO:GO:0030574 GO:GO:0051549 GO:GO:0031012 Gene3D:2.110.10.10 InterPro:IPR000585 InterPro:IPR018487 Pfam:PF00045 SMART:SM00120 SUPFAM:SSF50923 PROSITE:PS51642 SUPFAM:SSF47090 InterPro:IPR013806 SUPFAM:SSF57440 Gene3D:2.10.10.10 InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS00023 PROSITE:PS51092 InterPro:IPR018486 PROSITE:PS00024 TreeFam:TF315428 PANTHER:PTHR10201 GeneTree:ENSGT00730000110410 OrthoDB:EOG70KGNX InterPro:IPR006970 PANTHER:PTHR10201:SF30 Pfam:PF04886 OMA:EGDLKWH EMBL:CU407252 Ensembl:ENSSSCT00000008139 Uniprot:F1SC56) HSP 1 Score: 45.4394 bits (106), Expect = 9.801e-5 Identity = 26/60 (43.33%), Postives = 32/60 (53.33%), Query Frame = 0
Query: 27 DGHSCVFPFEYGNRKYTICTTVDKL-GSPWCATYTPY-KHGYWGYCPT---SCYTCGLSA 81
DG CVFPF + R Y+ CTT + G WC T Y + +G+CPT S T G SA
Sbjct: 283 DGKPCVFPFTFEGRSYSSCTTDGRSDGYRWCGTTANYDQDKLYGFCPTRADSTVTGGNSA 342 HSP 2 Score: 45.0542 bits (105), Expect = 1.405e-4 Identity = 22/57 (38.60%), Postives = 32/57 (56.14%), Query Frame = 0
Query: 28 GHSCVFPFEYGNRKYTICTTVDKL-GSPWCATYTPY-KHGYWGYCPTSCYTCGLSAS 82
G CVFPF + ++Y+ CT + G WCAT + + K WG+CP Y+ L A+
Sbjct: 343 GDLCVFPFTFLGKEYSACTREGRSDGHLWCATTSNFDKDKKWGFCPDQGYSLFLVAA 399
BLAST of EMLSAG00000009325 vs. GO
Match: - (symbol:HGFAC "Hepatocyte growth factor activator" species:9606 "Homo sapiens" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005576 "extracellular region" evidence=NAS] [GO:0005615 "extracellular space" evidence=IEA] [GO:0005791 "rough endoplasmic reticulum" evidence=IEA] [GO:0006508 "proteolysis" evidence=TAS] [GO:0008236 "serine-type peptidase activity" evidence=TAS] InterPro:IPR000001 InterPro:IPR000083 InterPro:IPR000742 InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR014394 InterPro:IPR018114 Pfam:PF00008 Pfam:PF00039 Pfam:PF00089 PIRSF:PIRSF001146 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS01253 PROSITE:PS50026 PROSITE:PS50240 PROSITE:PS51091 SMART:SM00020 SMART:SM00058 SMART:SM00181 GO:GO:0005576 GO:GO:0005615 EMBL:CH471131 GO:GO:0005791 GO:GO:0006508 GO:GO:0004252 InterPro:IPR013032 PROSITE:PS00022 SUPFAM:SSF50494 eggNOG:COG5640 OrthoDB:EOG75B84T PROSITE:PS01186 EMBL:AL590235 TreeFam:TF329901 Gene3D:2.40.20.10 InterPro:IPR013806 InterPro:IPR018056 Pfam:PF00051 SMART:SM00130 SUPFAM:SSF57440 PROSITE:PS00021 PROSITE:PS50070 Gene3D:2.10.10.10 InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS00023 PROSITE:PS51092 HOGENOM:HOG000237314 HOVERGEN:HBG004345 MEROPS:S01.228 CTD:3083 KO:K09631 EMBL:D14012 EMBL:BC112190 EMBL:D50030 EMBL:BC112192 PIR:A46688 RefSeq:NP_001519.1 UniGene:Hs.104 PDB:1YBW PDB:1YC0 PDB:2R0K PDB:2R0L PDB:2WUB PDB:2WUC PDB:3K2U PDBsum:1YBW PDBsum:1YC0 PDBsum:2R0K PDBsum:2R0L PDBsum:2WUB PDBsum:2WUC PDBsum:3K2U ProteinModelPortal:Q04756 SMR:Q04756 DIP:DIP-6022N IntAct:Q04756 STRING:9606.ENSP00000372224 PhosphoSite:Q04756 DMDM:547643 PaxDb:Q04756 PeptideAtlas:Q04756 PRIDE:Q04756 Ensembl:ENST00000382774 GeneID:3083 KEGG:hsa:3083 UCSC:uc003ghc.3 GeneCards:GC04P003443 HGNC:HGNC:4894 HPA:HPA058279 HPA:HPA059076 MIM:604552 neXtProt:NX_Q04756 PharmGKB:PA29270 InParanoid:Q04756 PhylomeDB:Q04756 EvolutionaryTrace:Q04756 GeneWiki:HGFAC GenomeRNAi:3083 NextBio:12223 PMAP-CutDB:Q04756 PRO:PR:Q04756 ArrayExpress:Q04756 Bgee:Q04756 CleanEx:HS_HGFAC Genevestigator:Q04756 Uniprot:Q04756) HSP 1 Score: 45.4394 bits (106), Expect = 1.126e-4 Identity = 21/47 (44.68%), Postives = 23/47 (48.94%), Query Frame = 0
Query: 25 TTDGHSCVFPFEYGNRKYTICTTVDKLGSPWCATYTPY-KHGYWGYC 70
T DG C FPF YG R CT+ WCAT Y + WGYC
Sbjct: 102 TEDGRPCRFPFRYGGRMLHACTSEGSAHRKWCATTHNYDRDRAWGYC 148
BLAST of EMLSAG00000009325 vs. GO
Match: - (symbol:HGFAC "Hepatocyte growth factor activator" species:9606 "Homo sapiens" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA] InterPro:IPR000001 InterPro:IPR000083 InterPro:IPR000742 InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR014394 InterPro:IPR018114 Pfam:PF00008 Pfam:PF00039 Pfam:PF00089 PIRSF:PIRSF001146 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS01253 PROSITE:PS50026 PROSITE:PS50240 PROSITE:PS51091 SMART:SM00020 SMART:SM00058 SMART:SM00181 GO:GO:0005615 GO:GO:0006508 GO:GO:0004252 InterPro:IPR013032 PROSITE:PS00022 SUPFAM:SSF50494 PROSITE:PS01186 EMBL:AL590235 Gene3D:2.40.20.10 InterPro:IPR013806 InterPro:IPR018056 Pfam:PF00051 SMART:SM00130 SUPFAM:SSF57440 PROSITE:PS00021 PROSITE:PS50070 Gene3D:2.10.10.10 InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS00023 PROSITE:PS51092 HOGENOM:HOG000237314 CTD:3083 KO:K09631 UniGene:Hs.104 GeneID:3083 KEGG:hsa:3083 HGNC:HGNC:4894 OMA:GTRHTAC RefSeq:XP_005248023.1 ProteinModelPortal:D6RAR4 SMR:D6RAR4 Ensembl:ENST00000511533 UCSC:uc010icw.3 NextBio:35493336 ArrayExpress:D6RAR4 Bgee:D6RAR4 Uniprot:D6RAR4) HSP 1 Score: 45.4394 bits (106), Expect = 1.138e-4 Identity = 21/47 (44.68%), Postives = 23/47 (48.94%), Query Frame = 0
Query: 25 TTDGHSCVFPFEYGNRKYTICTTVDKLGSPWCATYTPY-KHGYWGYC 70
T DG C FPF YG R CT+ WCAT Y + WGYC
Sbjct: 102 TEDGRPCRFPFRYGGRMLHACTSEGSAHRKWCATTHNYDRDRAWGYC 148
BLAST of EMLSAG00000009325 vs. GO
Match: - (symbol:Mmp2 "72 kDa type IV collagenase" species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia" evidence=IEA] [GO:0001955 "blood vessel maturation" evidence=IEA] [GO:0001957 "intramembranous ossification" evidence=IEA] [GO:0004222 "metalloendopeptidase activity" evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA] [GO:0007566 "embryo implantation" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030017 "sarcomere" evidence=IEA] [GO:0030574 "collagen catabolic process" evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IEA] [GO:0060325 "face morphogenesis" evidence=IEA] [GO:0060346 "bone trabecula formation" evidence=IEA] [GO:0071230 "cellular response to amino acid stimulus" evidence=IEA] InterPro:IPR001818 InterPro:IPR006026 InterPro:IPR021158 InterPro:IPR021190 InterPro:IPR024079 InterPro:IPR028708 Pfam:PF00413 PRINTS:PR00138 PROSITE:PS00546 SMART:SM00235 InterPro:IPR002477 Pfam:PF01471 GO:GO:0005886 GO:GO:0005615 GO:GO:0030017 GO:GO:0006508 GO:GO:0008270 GO:GO:0001666 GO:GO:0007566 GO:GO:0004222 GO:GO:0001955 Gene3D:3.40.390.10 GO:GO:0030574 GO:GO:0031012 Gene3D:2.110.10.10 InterPro:IPR000585 InterPro:IPR018487 Pfam:PF00045 SMART:SM00120 SUPFAM:SSF50923 PROSITE:PS51642 SUPFAM:SSF47090 GO:GO:0060325 InterPro:IPR013806 SUPFAM:SSF57440 GO:GO:0071230 GO:GO:0001957 Gene3D:2.10.10.10 InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS00023 PROSITE:PS51092 GO:GO:0060346 Gene3D:1.10.101.10 InterPro:IPR018486 PROSITE:PS00024 TreeFam:TF315428 PANTHER:PTHR10201 GeneTree:ENSGT00730000110410 PANTHER:PTHR10201:SF29 OMA:LMAPIYT OrthoDB:EOG70KGNX EMBL:AABR06097368 EMBL:AABR06097369 EMBL:AABR06097370 EMBL:AABR06097371 EMBL:AABR06097372 Ensembl:ENSRNOT00000022679 NextBio:35574789 Uniprot:E9PSM5) HSP 1 Score: 44.669 bits (104), Expect = 2.050e-4 Identity = 24/60 (40.00%), Postives = 32/60 (53.33%), Query Frame = 0
Query: 25 TTDGHSCVFPFEYGNRKYTICTTVDKL-GSPWCATYTPYKHGY-WGYCPTSCYTCGLSAS 82
++G CVFPF + KY CT+ + G WCAT T Y WG+CP Y+ L A+
Sbjct: 343 NSEGAPCVFPFTFLGNKYESCTSAGRSDGKVWCATTTNYDDDRKWGFCPDQGYSLFLVAA 402
BLAST of EMLSAG00000009325 vs. GO
Match: - (symbol:Mmp2 "72 kDa type IV collagenase" species:10116 "Rattus norvegicus" [GO:0004222 "metalloendopeptidase activity" evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] InterPro:IPR001818 InterPro:IPR006026 InterPro:IPR021158 InterPro:IPR021190 InterPro:IPR024079 InterPro:IPR028708 Pfam:PF00413 PRINTS:PR00138 PROSITE:PS00142 PROSITE:PS00546 SMART:SM00235 InterPro:IPR002477 Pfam:PF01471 RGD:621316 GO:GO:0005634 GO:GO:0005737 GO:GO:0009612 GO:GO:0016020 GO:GO:0014823 GO:GO:0042493 GO:GO:0016049 GO:GO:0051602 GO:GO:0006508 GO:GO:0008270 GO:GO:0005578 GO:GO:0001666 GO:GO:0007565 GO:GO:0008237 GO:GO:0001525 GO:GO:0043065 GO:GO:0016477 GO:GO:0032526 GO:GO:0004222 GO:GO:0035094 GO:GO:0001541 Gene3D:3.40.390.10 GO:GO:0007162 GO:GO:0030574 GO:GO:0030335 GO:GO:0042542 GO:GO:0045906 GO:GO:0007567 Gene3D:2.110.10.10 InterPro:IPR000585 InterPro:IPR018487 Pfam:PF00045 SMART:SM00120 SUPFAM:SSF50923 PROSITE:PS51642 GO:GO:0055093 SUPFAM:SSF47090 GO:GO:0060740 GO:GO:0009314 GO:GO:0071347 GO:GO:0014012 InterPro:IPR013806 SUPFAM:SSF57440 GO:GO:0071392 GO:GO:0001542 Gene3D:2.10.10.10 InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS00023 PROSITE:PS51092 GO:GO:0071498 GO:GO:0001553 GO:GO:0060033 GO:GO:0048771 Gene3D:1.10.101.10 InterPro:IPR018486 PROSITE:PS00024 HOVERGEN:HBG052484 PANTHER:PTHR10201 MEROPS:M10.003 CTD:4313 eggNOG:NOG303159 KO:K01398 PANTHER:PTHR10201:SF29 EMBL:X71466 EMBL:U65656 EMBL:BC074013 PIR:S34780 RefSeq:NP_112316.2 UniGene:Rn.6422 ProteinModelPortal:P33436 SMR:P33436 BindingDB:P33436 ChEMBL:CHEMBL1075175 PaxDb:P33436 PRIDE:P33436 GeneID:81686 KEGG:rno:81686 NextBio:615320 PRO:PR:P33436 Genevestigator:P33436 Uniprot:P33436) HSP 1 Score: 44.669 bits (104), Expect = 2.149e-4 Identity = 24/60 (40.00%), Postives = 32/60 (53.33%), Query Frame = 0
Query: 25 TTDGHSCVFPFEYGNRKYTICTTVDKL-GSPWCATYTPYKHGY-WGYCPTSCYTCGLSAS 82
++G CVFPF + KY CT+ + G WCAT T Y WG+CP Y+ L A+
Sbjct: 343 NSEGAPCVFPFTFLGNKYESCTSAGRSDGKVWCATTTNYDDDRKWGFCPDQGYSLFLVAA 402
BLAST of EMLSAG00000009325 vs. GO
Match: - (symbol:Mmp2 "matrix metallopeptidase 2" species:10116 "Rattus norvegicus" [GO:0001525 "angiogenesis" evidence=IEP] [GO:0001541 "ovarian follicle development" evidence=IDA] [GO:0001542 "ovulation from ovarian follicle" evidence=IEP] [GO:0001553 "luteinization" evidence=IEP] [GO:0001666 "response to hypoxia" evidence=ISO;IDA] [GO:0001955 "blood vessel maturation" evidence=ISO] [GO:0001957 "intramembranous ossification" evidence=ISO] [GO:0001968 "fibronectin binding" evidence=IPI] [GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISO] [GO:0005578 "proteinaceous extracellular matrix" evidence=IEA] [GO:0005615 "extracellular space" evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO] [GO:0006508 "proteolysis" evidence=IDA] [GO:0006979 "response to oxidative stress" evidence=IDA] [GO:0007162 "negative regulation of cell adhesion" evidence=IDA] [GO:0007565 "female pregnancy" evidence=IEP] [GO:0007566 "embryo implantation" evidence=ISO] [GO:0007567 "parturition" evidence=IEP] [GO:0007568 "aging" evidence=IEP] [GO:0008233 "peptidase activity" evidence=IDA] [GO:0008237 "metallopeptidase activity" evidence=TAS] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009314 "response to radiation" evidence=IEP] [GO:0009612 "response to mechanical stimulus" evidence=IDA] [GO:0014012 "peripheral nervous system axon regeneration" evidence=IDA] [GO:0014823 "response to activity" evidence=IEP] [GO:0016020 "membrane" evidence=IEA] [GO:0016477 "cell migration" evidence=IMP] [GO:0030017 "sarcomere" evidence=ISO] [GO:0030335 "positive regulation of cell migration" evidence=IMP] [GO:0030574 "collagen catabolic process" evidence=ISO;IDA] [GO:0032526 "response to retinoic acid" evidence=IEP] [GO:0034097 "response to cytokine" evidence=IEP] [GO:0035094 "response to nicotine" evidence=IEP] [GO:0042493 "response to drug" evidence=IEP;IDA] [GO:0042542 "response to hydrogen peroxide" evidence=IDA] [GO:0043065 "positive regulation of apoptotic process" evidence=IDA] [GO:0043627 "response to estrogen" evidence=IDA] [GO:0045089 "positive regulation of innate immune response" evidence=ISO] [GO:0045906 "negative regulation of vasoconstriction" evidence=IDA] [GO:0048705 "skeletal system morphogenesis" evidence=ISO] [GO:0048771 "tissue remodeling" evidence=IDA] [GO:0051602 "response to electrical stimulus" evidence=IEP] [GO:0055093 "response to hyperoxia" evidence=IEP] [GO:0060033 "anatomical structure regression" evidence=IEP] [GO:0060325 "face morphogenesis" evidence=ISO] [GO:0060346 "bone trabecula formation" evidence=ISO] [GO:0060740 "prostate gland epithelium morphogenesis" evidence=IMP] [GO:0071230 "cellular response to amino acid stimulus" evidence=ISO] [GO:0071345 "cellular response to cytokine stimulus" evidence=IEP] [GO:0071347 "cellular response to interleukin-1" evidence=IEP] [GO:0071392 "cellular response to estradiol stimulus" evidence=IMP] [GO:0071498 "cellular response to fluid shear stress" evidence=IEP] InterPro:IPR001818 InterPro:IPR006026 InterPro:IPR021158 InterPro:IPR021190 InterPro:IPR024079 InterPro:IPR028708 Pfam:PF00413 PRINTS:PR00138 PROSITE:PS00142 PROSITE:PS00546 SMART:SM00235 InterPro:IPR002477 Pfam:PF01471 RGD:621316 GO:GO:0005634 GO:GO:0005737 GO:GO:0009612 GO:GO:0016020 GO:GO:0014823 GO:GO:0042493 GO:GO:0016049 GO:GO:0051602 GO:GO:0006508 GO:GO:0008270 GO:GO:0005578 GO:GO:0001666 GO:GO:0007565 GO:GO:0008237 GO:GO:0001525 GO:GO:0043065 GO:GO:0016477 GO:GO:0032526 GO:GO:0004222 GO:GO:0035094 GO:GO:0001541 Gene3D:3.40.390.10 GO:GO:0007162 GO:GO:0030574 GO:GO:0030335 GO:GO:0042542 GO:GO:0045906 GO:GO:0007567 Gene3D:2.110.10.10 InterPro:IPR000585 InterPro:IPR018487 Pfam:PF00045 SMART:SM00120 SUPFAM:SSF50923 PROSITE:PS51642 GO:GO:0055093 SUPFAM:SSF47090 GO:GO:0060740 GO:GO:0009314 GO:GO:0071347 GO:GO:0014012 InterPro:IPR013806 SUPFAM:SSF57440 GO:GO:0071392 GO:GO:0001542 Gene3D:2.10.10.10 InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS00023 PROSITE:PS51092 GO:GO:0071498 GO:GO:0001553 GO:GO:0060033 GO:GO:0048771 Gene3D:1.10.101.10 InterPro:IPR018486 PROSITE:PS00024 HOVERGEN:HBG052484 PANTHER:PTHR10201 MEROPS:M10.003 CTD:4313 eggNOG:NOG303159 KO:K01398 PANTHER:PTHR10201:SF29 EMBL:X71466 EMBL:U65656 EMBL:BC074013 PIR:S34780 RefSeq:NP_112316.2 UniGene:Rn.6422 ProteinModelPortal:P33436 SMR:P33436 BindingDB:P33436 ChEMBL:CHEMBL1075175 PaxDb:P33436 PRIDE:P33436 GeneID:81686 KEGG:rno:81686 NextBio:615320 PRO:PR:P33436 Genevestigator:P33436 Uniprot:P33436) HSP 1 Score: 44.669 bits (104), Expect = 2.149e-4 Identity = 24/60 (40.00%), Postives = 32/60 (53.33%), Query Frame = 0
Query: 25 TTDGHSCVFPFEYGNRKYTICTTVDKL-GSPWCATYTPYKHGY-WGYCPTSCYTCGLSAS 82
++G CVFPF + KY CT+ + G WCAT T Y WG+CP Y+ L A+
Sbjct: 343 NSEGAPCVFPFTFLGNKYESCTSAGRSDGKVWCATTTNYDDDRKWGFCPDQGYSLFLVAA 402
BLAST of EMLSAG00000009325 vs. GO
Match: - (symbol:MMP9 "Matrix metalloproteinase-9" species:9606 "Homo sapiens" [GO:0001501 "skeletal system development" evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0004222 "metalloendopeptidase activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005518 "collagen binding" evidence=TAS] [GO:0005576 "extracellular region" evidence=TAS] [GO:0005578 "proteinaceous extracellular matrix" evidence=IEA] [GO:0005615 "extracellular space" evidence=IDA] [GO:0006508 "proteolysis" evidence=IDA] [GO:0007566 "embryo implantation" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=TAS] [GO:0022617 "extracellular matrix disassembly" evidence=TAS] [GO:0030198 "extracellular matrix organization" evidence=TAS] [GO:0030225 "macrophage differentiation" evidence=TAS] [GO:0030574 "collagen catabolic process" evidence=TAS] [GO:0042802 "identical protein binding" evidence=IPI] [GO:0043065 "positive regulation of apoptotic process" evidence=IEA] [GO:0050900 "leukocyte migration" evidence=IEA] [GO:0051549 "positive regulation of keratinocyte migration" evidence=IMP] InterPro:IPR001818 InterPro:IPR006026 InterPro:IPR021158 InterPro:IPR021190 InterPro:IPR024079 InterPro:IPR028688 Pfam:PF00413 PRINTS:PR00138 PROSITE:PS00142 PROSITE:PS00546 SMART:SM00235 InterPro:IPR002477 Reactome:REACT_118779 Pfam:PF01471 Reactome:REACT_111102 GO:GO:0005615 GO:GO:0006508 GO:GO:0008270 GO:GO:0005578 GO:GO:0007566 GO:GO:0043065 GO:GO:0001501 GO:GO:0004222 GO:GO:0005518 Gene3D:3.40.390.10 GO:GO:0030574 GO:GO:0022617 GO:GO:0051549 Gene3D:2.110.10.10 InterPro:IPR000585 InterPro:IPR018487 Pfam:PF00045 SMART:SM00120 SUPFAM:SSF50923 PROSITE:PS51642 SUPFAM:SSF47090 DrugBank:DB00641 InterPro:IPR013806 SUPFAM:SSF57440 MIM:603932 GO:GO:0030225 Gene3D:2.10.10.10 InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS00023 PROSITE:PS51092 DrugBank:DB01017 DrugBank:DB01296 InterPro:IPR018486 PROSITE:PS00024 HOVERGEN:HBG052484 TreeFam:TF315428 PANTHER:PTHR10201 Orphanet:1040 ChEMBL:CHEMBL2095216 OrthoDB:EOG70KGNX DrugBank:DB00786 MEROPS:M10.004 CTD:4318 eggNOG:NOG328372 KO:K01403 InterPro:IPR006970 PANTHER:PTHR10201:SF30 Pfam:PF04886 EMBL:J05070 EMBL:M68343 EMBL:M68344 EMBL:M68345 EMBL:M68346 EMBL:M68347 EMBL:M68348 EMBL:M68349 EMBL:M68350 EMBL:M68351 EMBL:M68352 EMBL:M68353 EMBL:M68354 EMBL:M68355 EMBL:AK313137 EMBL:AF538844 EMBL:DQ194553 EMBL:AL162458 EMBL:BC006093 EMBL:D10051 PIR:A34458 RefSeq:NP_004985.2 UniGene:Hs.297413 PDB:1GKC PDB:1GKD PDB:1ITV PDB:1L6J PDB:1LKG PDB:2OVX PDB:2OVZ PDB:2OW0 PDB:2OW1 PDB:2OW2 PDB:4H1Q PDB:4H2E PDB:4H3X PDB:4H82 PDB:4HMA PDBsum:1GKC PDBsum:1GKD PDBsum:1ITV PDBsum:1L6J PDBsum:1LKG PDBsum:2OVX PDBsum:2OVZ PDBsum:2OW0 PDBsum:2OW1 PDBsum:2OW2 PDBsum:4H1Q PDBsum:4H2E PDBsum:4H3X PDBsum:4H82 PDBsum:4HMA ProteinModelPortal:P14780 SMR:P14780 BioGrid:110461 DIP:DIP-29518N IntAct:P14780 MINT:MINT-7709677 STRING:9606.ENSP00000361405 GuidetoPHARMACOLOGY:1633 PhosphoSite:P14780 UniCarbKB:P14780 DMDM:269849668 PaxDb:P14780 PeptideAtlas:P14780 PRIDE:P14780 DNASU:4318 Ensembl:ENST00000372330 GeneID:4318 KEGG:hsa:4318 UCSC:uc002xqz.3 GeneCards:GC20P044637 H-InvDB:HIX0015874 HGNC:HGNC:7176 HPA:CAB000348 HPA:HPA001238 MIM:120361 MIM:613073 neXtProt:NX_P14780 PharmGKB:PA30889 InParanoid:P14780 OMA:EGDLKWH PhylomeDB:P14780 EvolutionaryTrace:P14780 GeneWiki:MMP9 GenomeRNAi:4318 NextBio:16989 PRO:PR:P14780 Bgee:P14780 CleanEx:HS_MMP9 Genevestigator:P14780 Uniprot:P14780) HSP 1 Score: 44.669 bits (104), Expect = 2.152e-4 Identity = 21/57 (36.84%), Postives = 32/57 (56.14%), Query Frame = 0
Query: 28 GHSCVFPFEYGNRKYTICTTVDK-LGSPWCATYTPY-KHGYWGYCPTSCYTCGLSAS 82
G CVFPF + ++Y+ CT+ + G WCAT + + WG+CP Y+ L A+
Sbjct: 344 GELCVFPFTFLGKEYSTCTSEGRGDGRLWCATTSNFDSDKKWGFCPDQGYSLFLVAA 400 HSP 2 Score: 43.8986 bits (102), Expect = 4.143e-4 Identity = 20/48 (41.67%), Postives = 28/48 (58.33%), Query Frame = 0
Query: 27 DGHSCVFPFEYGNRKYTICTTVDKL-GSPWCATYTPY-KHGYWGYCPT 72
DG +C FPF + R Y+ CTT + G PWC+T Y +G+CP+
Sbjct: 226 DGAACHFPFIFEGRSYSACTTDGRSDGLPWCSTTANYDTDDRFGFCPS 273
BLAST of EMLSAG00000009325 vs. GO
Match: - (symbol:Mmp9 "Matrix metalloproteinase-9" species:10116 "Rattus norvegicus" [GO:0004222 "metalloendopeptidase activity" evidence=ISS] [GO:0005578 "proteinaceous extracellular matrix" evidence=IEA] [GO:0005615 "extracellular space" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0050900 "leukocyte migration" evidence=IEA] InterPro:IPR001818 InterPro:IPR006026 InterPro:IPR021158 InterPro:IPR021190 InterPro:IPR024079 InterPro:IPR028688 Pfam:PF00413 PRINTS:PR00138 PROSITE:PS00142 PROSITE:PS00546 SMART:SM00235 InterPro:IPR002477 Pfam:PF01471 RGD:621320 GO:GO:0051259 GO:GO:0005615 GO:GO:0043234 GO:GO:0009612 GO:GO:0006979 GO:GO:0032403 GO:GO:0042493 GO:GO:0032355 GO:GO:0045471 GO:GO:0016049 GO:GO:0006508 GO:GO:0008270 GO:GO:0005578 GO:GO:0001666 GO:GO:0045766 GO:GO:0009408 GO:GO:0071222 GO:GO:0032526 GO:GO:0004222 GO:GO:0035094 Gene3D:3.40.390.10 GO:GO:0030574 GO:GO:0033189 Gene3D:2.110.10.10 InterPro:IPR000585 InterPro:IPR018487 Pfam:PF00045 SMART:SM00120 SUPFAM:SSF50923 PROSITE:PS51642 GO:GO:0055093 SUPFAM:SSF47090 GO:GO:0031915 GO:GO:0001503 GO:GO:0009314 GO:GO:0071347 GO:GO:0071356 InterPro:IPR013806 SUPFAM:SSF57440 Gene3D:2.10.10.10 InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS00023 PROSITE:PS51092 GO:GO:0071404 GO:GO:0071283 GO:GO:0060033 GO:GO:0048771 Gene3D:1.10.101.10 GO:GO:0071460 InterPro:IPR018486 PROSITE:PS00024 GO:GO:0019087 HOVERGEN:HBG052484 PANTHER:PTHR10201 HOGENOM:HOG000217926 MEROPS:M10.004 CTD:4318 eggNOG:NOG328372 KO:K01403 InterPro:IPR006970 PANTHER:PTHR10201:SF30 Pfam:PF04886 EMBL:U24441 EMBL:U36476 PIR:JC4364 PIR:S62907 RefSeq:NP_112317.1 UniGene:Rn.10209 ProteinModelPortal:P50282 SMR:P50282 STRING:10116.ENSRNOP00000023965 BindingDB:P50282 ChEMBL:CHEMBL3870 PaxDb:P50282 PRIDE:P50282 GeneID:81687 KEGG:rno:81687 InParanoid:P50282 NextBio:615324 PRO:PR:P50282 Genevestigator:P50282 Uniprot:P50282) HSP 1 Score: 44.2838 bits (103), Expect = 2.459e-4 Identity = 21/57 (36.84%), Postives = 32/57 (56.14%), Query Frame = 0
Query: 28 GHSCVFPFEYGNRKYTICTTVDKL-GSPWCATYTPYK-HGYWGYCPTSCYTCGLSAS 82
G CVFPF + ++Y+ CT+ + G WCAT + + WG+CP Y+ L A+
Sbjct: 345 GEMCVFPFVFLGKQYSTCTSEGRSDGRLWCATTSNFDADKKWGFCPDQGYSLFLVAA 401
BLAST of EMLSAG00000009325 vs. GO
Match: - (symbol:Mmp9 "matrix metallopeptidase 9" species:10116 "Rattus norvegicus" [GO:0001501 "skeletal system development" evidence=IEA;ISO] [GO:0001503 "ossification" evidence=IEA;IEP] [GO:0001666 "response to hypoxia" evidence=IEP] [GO:0001822 "kidney development" evidence=IEP] [GO:0001968 "fibronectin binding" evidence=IPI] [GO:0002687 "positive regulation of leukocyte migration" evidence=IDA] [GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISO;ISS;TAS] [GO:0005515 "protein binding" evidence=IPI] [GO:0005578 "proteinaceous extracellular matrix" evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA;ISO;ISS;IDA] [GO:0006508 "proteolysis" evidence=IEP;ISO;ISS;IDA] [GO:0006979 "response to oxidative stress" evidence=IDA] [GO:0007566 "embryo implantation" evidence=IEA;ISO] [GO:0007567 "parturition" evidence=IEP] [GO:0007568 "aging" evidence=IEP] [GO:0007584 "response to nutrient" evidence=IEP] [GO:0008233 "peptidase activity" evidence=ISO;IDA] [GO:0008237 "metallopeptidase activity" evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009314 "response to radiation" evidence=IEP] [GO:0009408 "response to heat" evidence=IEP] [GO:0009612 "response to mechanical stimulus" evidence=IEP] [GO:0009644 "response to high light intensity" evidence=IEP] [GO:0010033 "response to organic substance" evidence=IEP] [GO:0014070 "response to organic cyclic compound" evidence=IEP] [GO:0019087 "transformation of host cell by virus" evidence=IDA] [GO:0030198 "extracellular matrix organization" evidence=IEA;ISO] [GO:0030574 "collagen catabolic process" evidence=IEA;ISO;IDA] [GO:0031012 "extracellular matrix" evidence=IEA] [GO:0031915 "positive regulation of synaptic plasticity" evidence=IMP] [GO:0032355 "response to estradiol" evidence=IEP] [GO:0032403 "protein complex binding" evidence=IDA] [GO:0032496 "response to lipopolysaccharide" evidence=IEP] [GO:0032526 "response to retinoic acid" evidence=IEP] [GO:0033189 "response to vitamin A" evidence=IEP] [GO:0034612 "response to tumor necrosis factor" evidence=IEP] [GO:0035094 "response to nicotine" evidence=IEP] [GO:0042493 "response to drug" evidence=IEP;IDA] [GO:0042802 "identical protein binding" evidence=IEA;ISO] [GO:0043065 "positive regulation of apoptotic process" evidence=IEA;ISO] [GO:0043234 "protein complex" evidence=IDA] [GO:0045471 "response to ethanol" evidence=IEP] [GO:0045766 "positive regulation of angiogenesis" evidence=IMP] [GO:0048147 "negative regulation of fibroblast proliferation" evidence=IMP] [GO:0048771 "tissue remodeling" evidence=IDA] [GO:0050900 "leukocyte migration" evidence=IEA] [GO:0051259 "protein oligomerization" evidence=IDA] [GO:0051549 "positive regulation of keratinocyte migration" evidence=IEA;ISO] [GO:0055093 "response to hyperoxia" evidence=IEP] [GO:0060033 "anatomical structure regression" evidence=IEP] [GO:0071222 "cellular response to lipopolysaccharide" evidence=IEP] [GO:0071283 "cellular response to iron(III) ion" evidence=IEP] [GO:0071345 "cellular response to cytokine stimulus" evidence=IEP] [GO:0071347 "cellular response to interleukin-1" evidence=IEP] [GO:0071356 "cellular response to tumor necrosis factor" evidence=IEP] [GO:0071404 "cellular response to low-density lipoprotein particle stimulus" evidence=IEP] [GO:0071460 "cellular response to cell-matrix adhesion" evidence=IEP;IMP] InterPro:IPR001818 InterPro:IPR006026 InterPro:IPR021158 InterPro:IPR021190 InterPro:IPR024079 InterPro:IPR028688 Pfam:PF00413 PRINTS:PR00138 PROSITE:PS00142 PROSITE:PS00546 SMART:SM00235 InterPro:IPR002477 Pfam:PF01471 RGD:621320 GO:GO:0051259 GO:GO:0005615 GO:GO:0043234 GO:GO:0009612 GO:GO:0006979 GO:GO:0032403 GO:GO:0042493 GO:GO:0032355 GO:GO:0045471 GO:GO:0016049 GO:GO:0006508 GO:GO:0008270 GO:GO:0005578 GO:GO:0001666 GO:GO:0045766 GO:GO:0009408 GO:GO:0071222 GO:GO:0032526 GO:GO:0004222 GO:GO:0035094 Gene3D:3.40.390.10 GO:GO:0030574 GO:GO:0033189 Gene3D:2.110.10.10 InterPro:IPR000585 InterPro:IPR018487 Pfam:PF00045 SMART:SM00120 SUPFAM:SSF50923 PROSITE:PS51642 GO:GO:0055093 SUPFAM:SSF47090 GO:GO:0031915 GO:GO:0001503 GO:GO:0009314 GO:GO:0071347 GO:GO:0071356 InterPro:IPR013806 SUPFAM:SSF57440 Gene3D:2.10.10.10 InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS00023 PROSITE:PS51092 GO:GO:0071404 GO:GO:0071283 GO:GO:0060033 GO:GO:0048771 Gene3D:1.10.101.10 GO:GO:0071460 InterPro:IPR018486 PROSITE:PS00024 GO:GO:0019087 HOVERGEN:HBG052484 PANTHER:PTHR10201 HOGENOM:HOG000217926 MEROPS:M10.004 CTD:4318 eggNOG:NOG328372 KO:K01403 InterPro:IPR006970 PANTHER:PTHR10201:SF30 Pfam:PF04886 EMBL:U24441 EMBL:U36476 PIR:JC4364 PIR:S62907 RefSeq:NP_112317.1 UniGene:Rn.10209 ProteinModelPortal:P50282 SMR:P50282 STRING:10116.ENSRNOP00000023965 BindingDB:P50282 ChEMBL:CHEMBL3870 PaxDb:P50282 PRIDE:P50282 GeneID:81687 KEGG:rno:81687 InParanoid:P50282 NextBio:615324 PRO:PR:P50282 Genevestigator:P50282 Uniprot:P50282) HSP 1 Score: 44.2838 bits (103), Expect = 2.459e-4 Identity = 21/57 (36.84%), Postives = 32/57 (56.14%), Query Frame = 0
Query: 28 GHSCVFPFEYGNRKYTICTTVDKL-GSPWCATYTPYK-HGYWGYCPTSCYTCGLSAS 82
G CVFPF + ++Y+ CT+ + G WCAT + + WG+CP Y+ L A+
Sbjct: 345 GEMCVFPFVFLGKQYSTCTSEGRSDGRLWCATTSNFDADKKWGFCPDQGYSLFLVAA 401
BLAST of EMLSAG00000009325 vs. C. finmarchicus
Match: gi|592953403|gb|GAXK01005150.1| (TSA: Calanus finmarchicus comp1528670_c0_seq1 transcribed RNA sequence) HSP 1 Score: 57.3806 bits (137), Expect = 3.744e-9 Identity = 29/70 (41.43%), Postives = 36/70 (51.43%), Query Frame = 0
Query: 10 VFLLFISIVWSKNCETTDGHSCVFPFEYGNRKYTICTTVDKLGSPWCATYTPYKHGY---WGYCPTSCYT 76
+ L SI +NC+T C FPFEY N+ YT CT + G WC T + K G WGYC +C T
Sbjct: 1312 LLLTVQSIKAMENCKTVGQKQCRFPFEYNNKMYTGCTDRNNAGKYWCRTTSTSKPGSSEDWGYCEATCTT 1521 HSP 2 Score: 36.5798 bits (83), Expect = 3.647e-2 Identity = 16/48 (33.33%), Postives = 24/48 (50.00%), Query Frame = 0
Query: 113 EQSDIQILDVEKTVIHEGFDETTGVNDIALIKTVGKFAFTDLVLPLCM 160
+ +Q V + +IH G+D+T NDIALIK + V C+
Sbjct: 661 DNPKVQKRGVSEVIIHSGYDKTKNTNDIALIKMTREVMLNRFVQLACL 804
BLAST of EMLSAG00000009325 vs. C. finmarchicus
Match: gi|592793577|gb|GAXK01160991.1| (TSA: Calanus finmarchicus comp502531_c0_seq3 transcribed RNA sequence) HSP 1 Score: 47.7506 bits (112), Expect = 9.280e-7 Identity = 33/87 (37.93%), Postives = 41/87 (47.13%), Query Frame = 0
Query: 1 MKFLFECTSVFLLFISIVWSKNCE------TTDGHSCVFPFEYGNRKYTICTTV-DKLGSPWCATYTPYKHGY------WGYCPTSC 74
M+ L +C L+F SI+ NCE T CVFPF Y N Y+ CT V D+ G WCAT Y WG+C + C
Sbjct: 73 MQILLKCCRKVLIF-SILSCVNCEDCFTVDTPKDFPCVFPFTYMNTTYSGCTNVGDRDGKLWCATKVGENVSYENSSLDWGFCSSEC 330
BLAST of EMLSAG00000009325 vs. C. finmarchicus
Match: gi|592915757|gb|GAXK01042618.1| (TSA: Calanus finmarchicus comp1368445_c0_seq1 transcribed RNA sequence) HSP 1 Score: 49.6766 bits (117), Expect = 1.056e-6 Identity = 23/48 (47.92%), Postives = 28/48 (58.33%), Query Frame = 0
Query: 29 HSCVFPFEYGNRKYTICTTVDKLGSPWCATYT--PYKHGYWGYCPTSC 74
+ CVFPF++ NR T CTT+D +PWCAT K WGYC C
Sbjct: 655 NQCVFPFKFNNRIITSCTTIDGDTTPWCATAVNRDEKMTAWGYCHREC 798
BLAST of EMLSAG00000009325 vs. C. finmarchicus
Match: gi|592862147|gb|GAXK01095415.1| (TSA: Calanus finmarchicus comp201347_c3_seq2 transcribed RNA sequence) HSP 1 Score: 49.2914 bits (116), Expect = 1.300e-6 Identity = 34/95 (35.79%), Postives = 44/95 (46.32%), Query Frame = 0
Query: 17 IVWSKNCETTDG----HSCVFPFEYGNRKYTICTTVDKLGSPWCATYT----PYKHGYWGYCPTSC-----YTCGLSASISRSCNDDVLRYASNP 98
I+ +C T G CVFPF Y Y+ CTT DK G+ WC+T T + GY+GYCP +C +C S + CN V P
Sbjct: 127 IISVPSCTTESGPYADQPCVFPFRYNGITYSSCTTQDK-GAAWCSTKTTLAGTHVPGYFGYCPATCPAGSSTSCSPGTSYTTECNTCVCGADGQP 408 HSP 2 Score: 35.039 bits (79), Expect = 9.214e-2 Identity = 17/38 (44.74%), Postives = 19/38 (50.00%), Query Frame = 0
Query: 21 KNCETTDGHSCVFPFEYGNRKYTICTTVDKLGSPWCAT 58
C T G CVFPF Y +Y CT +PWCAT
Sbjct: 490 NTCSTLTGSECVFPFTYQGAEYYRCTYAAS-PTPWCAT 600
BLAST of EMLSAG00000009325 vs. C. finmarchicus
Match: gi|592752830|gb|GAXK01201583.1| (TSA: Calanus finmarchicus comp87926_c0_seq1 transcribed RNA sequence) HSP 1 Score: 49.2914 bits (116), Expect = 1.723e-6 Identity = 24/52 (46.15%), Postives = 30/52 (57.69%), Query Frame = 0
Query: 23 CETTDGHSCVFPFEYGNRKYTICTTVDKLGSPWCATYTP----YKHGYWGYC 70
C +T G CVFPF Y + KY CT VD G PWC+ T ++ G +GYC
Sbjct: 400 CVSTKGEKCVFPFTYKDVKYEECTEVDGGGKPWCSLSTDENGMHQKGKYGYC 555 HSP 2 Score: 43.5134 bits (101), Expect = 1.666e-4 Identity = 30/102 (29.41%), Postives = 47/102 (46.08%), Query Frame = 0
Query: 11 FLLFISIVWSKNCETTDGHSCVFPFEYGNRKYTICTTVDKLGSPWCATYTPY--KHGYWGYCPTSCYTCGLSASISRSCNDDVLRYASNPDFPWHVQVGSSK 110
L+ ++ C T DG +CVFPF G++ +++CT WC+T K+ WGYCP TC L I+ ++ + FP+ S+K
Sbjct: 118 ILISVTSQIKAACLTEDGDACVFPFIDGSKTFSVCTKHSN--RFWCSTKNKADGKYDTWGYCPEG-GTCPLEGEITGPVSNCKTTSGKSCTFPFKTACVSTK 414
BLAST of EMLSAG00000009325 vs. C. finmarchicus
Match: gi|592762392|gb|GAXK01192021.1| (TSA: Calanus finmarchicus comp41789_c2_seq2 transcribed RNA sequence) HSP 1 Score: 48.521 bits (114), Expect = 3.967e-6 Identity = 25/54 (46.30%), Postives = 29/54 (53.70%), Query Frame = 0
Query: 28 GHSCVFPFEYGNRKYTICTTVDKL-GSPWCATYTPYK------HGYWGYCPTSC 74
G CVFPF Y +R Y C VD G PWC+T T G WG+CP+SC
Sbjct: 1902 GARCVFPFTYKDRVYRGCILVDADDGIPWCSTLTDNNGQHIGGQGKWGHCPSSC 2063 HSP 2 Score: 30.0314 bits (66), Expect = 5.482e+0 Identity = 13/47 (27.66%), Postives = 26/47 (55.32%), Query Frame = 0
Query: 114 QSDIQILDVEKTVIHEGFDETTGVNDIALIKTVGKFAFTDLVLPLCM 160
+++ Q V + HE +++ T +DIA+IK ++ V P+C+
Sbjct: 2766 ETEDQTFTVASMINHENYNDVTYEHDIAIIKLDRPATLSNSVWPICL 2906
BLAST of EMLSAG00000009325 vs. C. finmarchicus
Match: gi|592762393|gb|GAXK01192020.1| (TSA: Calanus finmarchicus comp41789_c2_seq1 transcribed RNA sequence) HSP 1 Score: 48.521 bits (114), Expect = 3.969e-6 Identity = 25/54 (46.30%), Postives = 29/54 (53.70%), Query Frame = 0
Query: 28 GHSCVFPFEYGNRKYTICTTVDKL-GSPWCATYTPYK------HGYWGYCPTSC 74
G CVFPF Y +R Y C VD G PWC+T T G WG+CP+SC
Sbjct: 1902 GARCVFPFTYKDRVYRGCILVDADDGIPWCSTLTDNNGQHIGGQGKWGHCPSSC 2063 HSP 2 Score: 30.0314 bits (66), Expect = 5.483e+0 Identity = 13/47 (27.66%), Postives = 26/47 (55.32%), Query Frame = 0
Query: 114 QSDIQILDVEKTVIHEGFDETTGVNDIALIKTVGKFAFTDLVLPLCM 160
+++ Q V + HE +++ T +DIA+IK ++ V P+C+
Sbjct: 2778 ETEDQTFTVASMINHENYNDVTYEHDIAIIKLDRPATLSNSVWPICL 2918
BLAST of EMLSAG00000009325 vs. C. finmarchicus
Match: gi|592862148|gb|GAXK01095414.1| (TSA: Calanus finmarchicus comp201347_c3_seq1 transcribed RNA sequence) HSP 1 Score: 47.7506 bits (112), Expect = 4.605e-6 Identity = 34/95 (35.79%), Postives = 44/95 (46.32%), Query Frame = 0
Query: 17 IVWSKNCETTDG----HSCVFPFEYGNRKYTICTTVDKLGSPWCATYT----PYKHGYWGYCPTSC-----YTCGLSASISRSCNDDVLRYASNP 98
I+ +C T G CVFPF Y Y+ CTT DK G+ WC+T T + GY+GYCP +C +C S + CN V P
Sbjct: 127 IISVPSCTTESGPYADQPCVFPFRYNGITYSSCTTQDK-GAAWCSTKTTLAGTHVPGYFGYCPATCPAGSSTSCSPGTSYTTECNTCVCGADGQP 408 HSP 2 Score: 36.1946 bits (82), Expect = 3.522e-2 Identity = 18/36 (50.00%), Postives = 20/36 (55.56%), Query Frame = 0
Query: 23 CETTDGHSCVFPFEYGNRKYTICTTVDKLGSPWCAT 58
C T G CVFPF Y +Y CT D +PWCAT
Sbjct: 490 CSTQTGDRCVFPFTYQGVEYYQCTYADSP-TPWCAT 594
BLAST of EMLSAG00000009325 vs. C. finmarchicus
Match: gi|592888017|gb|GAXK01070358.1| (TSA: Calanus finmarchicus comp215172_c0_seq2 transcribed RNA sequence) HSP 1 Score: 47.7506 bits (112), Expect = 6.431e-6 Identity = 25/62 (40.32%), Postives = 34/62 (54.84%), Query Frame = 0
Query: 22 NCETTDGHSCVFPFEYGNRKYTICTT-VDKLGSPWCATYTP------YKHGYWGYCPTSCYT 76
NC +++G C FPF++ N+ + CTT D PWC+T T G +GYCP SC T
Sbjct: 1229 NCVSSNGKECKFPFKFRNKVFASCTTDFDPDDRPWCSTKTDDGGVHVPGEGEFGYCPDSCLT 1414 HSP 2 Score: 32.3426 bits (72), Expect = 1.043e+0 Identity = 31/122 (25.41%), Postives = 47/122 (38.52%), Query Frame = 0
Query: 67 WGYCPTS--------CYTCGLSASISRSCNDDVLRYASNPDFPWHVQVGSSKMIEQSDIQILDVEKTVIHEGFDETTGVNDIALIKTVGKF-------AFTDLVLPLCM---NIDRSIIQQG 170
+G CP++ C G AS SR DV Y +G +K E + DV K +IH G+D +NDI + + +P+C+ DR ++Q G
Sbjct: 455 FGSCPSNYLEFTHEECAREGCPASCSRLGPSDVRLY-----------LGVTKRTEITKSDGKDVSKIIIHPGWDRKEKLNDILEGHDIALLFMKREVNMYNRKTIPICLPDPGKDRYLLQSG 787
BLAST of EMLSAG00000009325 vs. C. finmarchicus
Match: gi|592749711|gb|GAXK01204702.1| (TSA: Calanus finmarchicus comp2741598_c0_seq1 transcribed RNA sequence) HSP 1 Score: 47.3654 bits (111), Expect = 6.465e-6 Identity = 20/56 (35.71%), Postives = 30/56 (53.57%), Query Frame = 0
Query: 23 CETTDGHSCVFPFEYGNRKYTICTTVDKLGSPWCATYTPYK---HGYWGYCPTSCY 75
C+T + +CVFPF Y + + C+T+ +PWCAT Y+ G W C C+
Sbjct: 674 CQTINSVACVFPFIYSGQVFHQCSTMHNNNTPWCATMVDYQGNVQGDWDNCGAGCF 841 HSP 2 Score: 44.2838 bits (103), Expect = 8.884e-5 Identity = 21/51 (41.18%), Postives = 22/51 (43.14%), Query Frame = 0
Query: 28 GHSCVFPFEYGNRKYTICTTVDKLGSPWCATYTP----YKHGYWGYCPTSC 74
G CVFPF Y Y C D G+ WCAT Y G WG C C
Sbjct: 938 GRDCVFPFIYRGDMYKECIAKDNFGNLWCATQVDTLGNYMDGKWGNCSLDC 1090
BLAST of EMLSAG00000009325 vs. L. salmonis peptides
Match: EMLSAP00000009325 (pep:novel supercontig:LSalAtl2s:LSalAtl2s595:738044:740181:-1 gene:EMLSAG00000009325 transcript:EMLSAT00000009325 description:"maker-LSalAtl2s595-augustus-gene-7.5") HSP 1 Score: 375.941 bits (964), Expect = 3.427e-134 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0
Query: 1 MKFLFECTSVFLLFISIVWSKNCETTDGHSCVFPFEYGNRKYTICTTVDKLGSPWCATYTPYKHGYWGYCPTSCYTCGLSASISRSCNDDVLRYASNPDFPWHVQVGSSKMIEQSDIQILDVEKTVIHEGFDETTGVNDIALIKTVGKFAFTDLVLPLCMNIDRSIIQQGANGTSNIFVK 180
MKFLFECTSVFLLFISIVWSKNCETTDGHSCVFPFEYGNRKYTICTTVDKLGSPWCATYTPYKHGYWGYCPTSCYTCGLSASISRSCNDDVLRYASNPDFPWHVQVGSSKMIEQSDIQILDVEKTVIHEGFDETTGVNDIALIKTVGKFAFTDLVLPLCMNIDRSIIQQGANGTSNIFVK
Sbjct: 1 MKFLFECTSVFLLFISIVWSKNCETTDGHSCVFPFEYGNRKYTICTTVDKLGSPWCATYTPYKHGYWGYCPTSCYTCGLSASISRSCNDDVLRYASNPDFPWHVQVGSSKMIEQSDIQILDVEKTVIHEGFDETTGVNDIALIKTVGKFAFTDLVLPLCMNIDRSIIQQGANGTSNIFVK 180
BLAST of EMLSAG00000009325 vs. L. salmonis peptides
Match: EMLSAP00000001992 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1357:15483:16755:-1 gene:EMLSAG00000001992 transcript:EMLSAT00000001992 description:"maker-LSalAtl2s1357-snap-gene-0.15") HSP 1 Score: 171.014 bits (432), Expect = 2.179e-52 Identity = 93/220 (42.27%), Postives = 122/220 (55.45%), Query Frame = 0
Query: 1 MKFLFECTSVFLLFISIVWSKNCETTDG---HSCVFPFEYGNRKYTICTTVDKLGSPWCATYTPYKHGYWGYCPTSCYTCGLSASISRSCNDDVLRYASNPDFPWH-------------------------------------------VQVGSSKMIEQSDIQILDVEKTVIHEGFDETTGVNDIALIKTVGKFAFTDLVLPLCMNIDRSIIQQGANGT 174
MKF FE T +F+ FISI WS + +G + C+ PF Y + Y ICTT PWCATY PY H YWGYCP SC+TCG+S S++RSCND V RYA++ D PWH V+VG+ M +QIL++EK HE +++ + NDIAL+KT KF F+DLVLP+C+N+D+S I+ GA GT
Sbjct: 1 MKFFFETTFLFIFFISIAWSMH----NGRWLYLCI-PFIYNYKTYDICTTDFNREMPWCATYMPYTHRYWGYCPQSCFTCGVSNSVTRSCNDGVNRYATDSDIPWHALIKRKNSQSDFFCSGVIISEQWVLTTHIGIDKLKTQYIDYLEVKVGNKDMKSLEHVQILNIEKITKHEDYNDWSIRNDIALVKTKSKFIFSDLVLPICLNVDKSKIKFGATGT 215
BLAST of EMLSAG00000009325 vs. L. salmonis peptides
Match: EMLSAP00000002306 (pep:novel supercontig:LSalAtl2s:LSalAtl2s14360:3:399:-1 gene:EMLSAG00000002306 transcript:EMLSAT00000002306 description:"maker-LSalAtl2s14360-augustus-gene-0.0") HSP 1 Score: 119.398 bits (298), Expect = 1.716e-34 Identity = 57/64 (89.06%), Postives = 60/64 (93.75%), Query Frame = 0
Query: 111 MIEQSDIQILDVEKTVIHEGFDETTGVNDIALIKTVGKFAFTDLVLPLCMNIDRSIIQQGANGT 174
MIEQS IQILD+EKTVIHEGFD+TTGVNDIAL+KTVGKF FTDLVL LCMNIDRSII QGANGT
Sbjct: 1 MIEQSKIQILDIEKTVIHEGFDKTTGVNDIALLKTVGKFTFTDLVLSLCMNIDRSIIHQGANGT 64
BLAST of EMLSAG00000009325 vs. L. salmonis peptides
Match: EMLSAP00000005345 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2882:48158:49259:1 gene:EMLSAG00000005345 transcript:EMLSAT00000005345 description:"augustus-LSalAtl2s2882-processed-gene-0.0") HSP 1 Score: 78.9518 bits (193), Expect = 2.714e-18 Identity = 59/209 (28.23%), Postives = 82/209 (39.23%), Query Frame = 0
Query: 10 VFLLFISIVWSKNCETTDGHSCVFPFEYGNRKYTICTTVDK--LGSPWCATYTPYKHGYWGYCPTSCYTCGLSASISRSCN---DDVLRYASNPDFPWHVQV---------------------------------------GSSKMIEQSDIQILDVEKTVIHEGFDETTGVNDIALIKTVGKFAFTDLVLPLCMNIDRSIIQQGANGT 174
+FL + K C T G C+FPF Y + ICT VD PWC K+G W YC C+ CG+S + SCN + + N FPWH + GS Q V+ V HEG++ TG N+IA+I + + D VLP+C + D I++G + T
Sbjct: 8 IFLQSLIFANGKECTTPSG-DCLFPFTY-RGTHKICTLVDTSIYPKPWCYL----KNGQWDYCSDDCFDCGVSNDLGNSCNQQKEGSQGFFDNAVFPWHAHIVNRENQQVLCNGVIVSNDRVLTTANCKGYYHKHGINIYAGSGTYYNNDGYQDGRVKSFVAHEGYNMKTGENNIAVIGLHNRLVWNDRVLPICFSNDYFPIKEGQSAT 210
BLAST of EMLSAG00000009325 vs. L. salmonis peptides
Match: EMLSAP00000000568 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1094:119279:122247:-1 gene:EMLSAG00000000568 transcript:EMLSAT00000000568 description:"snap-LSalAtl2s1094-processed-gene-1.29") HSP 1 Score: 73.9442 bits (180), Expect = 1.846e-16 Identity = 57/202 (28.22%), Postives = 78/202 (38.61%), Query Frame = 0
Query: 17 IVWSKNCETTDGHSCVFPFEYGNRKYTICTTVDK--LGSPWCATYTPYKHGYWGYCPTSCYTCGLSASISRSCNDDV---LRYASNPDFPWHVQV---------------------------------------GSSKMIEQSDIQILDVEKTVIHEGFDETTGVNDIALIKTVGKFAFTDLVLPLCMNIDRSIIQQGANGT 174
+ + K C T G C+FPF Y + ICT VD PWC K G W YC C+ CG+S + SC Y N FPWHV++ GS Q ++ V HEG++ TG N+IA+I + + D VLP+C+ + IQ G + T
Sbjct: 10 VKYLKKCTTPSG-DCLFPFTY-RGTHKICTIVDTNIYTKPWCY----LKDGGWDYCLDDCFDCGVSNDLGHSCQQQAEGSEGYFDNAVFPWHVRIINRRNKQILCNGVILTNDRVITTANCKGYYHKYGINVIAGSGTFFYIDGFQDGIIKSFVAHEGYNPQTGENNIAIIGLHDRLVWNDRVLPICLTDNYLPIQDGQSAT 205
BLAST of EMLSAG00000009325 vs. L. salmonis peptides
Match: EMLSAP00000009899 (pep:novel supercontig:LSalAtl2s:LSalAtl2s645:169207:181410:1 gene:EMLSAG00000009899 transcript:EMLSAT00000009899 description:"maker-LSalAtl2s645-snap-gene-1.9") HSP 1 Score: 66.6254 bits (161), Expect = 1.673e-13 Identity = 45/137 (32.85%), Postives = 63/137 (45.99%), Query Frame = 0
Query: 31 CVFPFEYGNRKYTICTTVDKLGSPWCATYTP---YKHGYWGYCPTSCYTCGLSASISRSCN---DDVLRYASNPDFPWHVQVGSSKMIEQSDIQIL-DVEKTVIHEGFDETTGVNDIALIKTVGKFAFTDLVLPLCM 160
C FPF+Y + Y CT V +PWCAT ++ + YC SC CG S SRSCN + A D+PWH++ GS S IL + H +D TT NDI ++ ++P+C+
Sbjct: 256 CKFPFKYRGKMYYTCTDVAS-DTPWCATEVREETKEYTEYDYCEPSCIQCGTSNHPSRSCNQTTEGEKGTAQLEDYPWHIKTGSLDSEAFSTRYILYSISDKEYHPYYDSTTHQNDIVILTAEFNMVPNINLIPVCL 391
BLAST of EMLSAG00000009325 vs. L. salmonis peptides
Match: EMLSAP00000004014 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2151:16886:18993:-1 gene:EMLSAG00000004014 transcript:EMLSAT00000004014 description:"snap-LSalAtl2s2151-processed-gene-0.9") HSP 1 Score: 64.3142 bits (155), Expect = 8.076e-13 Identity = 52/194 (26.80%), Postives = 74/194 (38.14%), Query Frame = 0
Query: 25 TTDGHSCVFPFEYGNRKYTICTTV--DKLGSPWCATYTPYKHGYWGYCPTSCYTCGLSASISRSCNDDVLRYASNPD---FPWHVQV---------------------------------------GSSKMIEQSDIQILDVEKTVIHEGFDETTGVNDIALIKTVGKFAFTDLVLPLCMNIDRSIIQQGANGT 174
TT +C+FPF Y + IC+ V D PWC KH W YC C+ CG+S + SCN D FPWH ++ G + Q ++ V HEG++ TT N+IA+I + + D VLP+C + D I+ G + T
Sbjct: 16 TTPSGNCLFPFTYYG-THRICSFVGTDIYPRPWCYL----KHDQWDYCSDECFDCGVSNDLGNSCNQQKEGSEGRFDCAVFPWHARIVHRYKQEVLCNGVILTNDRVLTTANCQGHYHRYGINVYAGGGTNNYANGFQDGIIKSFVPHEGYNMTTCENNIAIIALHERLVWNDRVLPICFSNDYFPIKDGQSAT 204
BLAST of EMLSAG00000009325 vs. L. salmonis peptides
Match: EMLSAP00000000567 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1094:105139:108358:-1 gene:EMLSAG00000000567 transcript:EMLSAT00000000567 description:"snap-LSalAtl2s1094-processed-gene-1.25") HSP 1 Score: 60.4622 bits (145), Expect = 3.617e-12 Identity = 35/102 (34.31%), Postives = 49/102 (48.04%), Query Frame = 0
Query: 76 TCGLSASISRSCNDDVLR---YASNPDFPWHVQVGSSKMIEQSDIQILDVEKTVIHEGFDETTGVNDIALIKTVGKFAFTDLVLPLCMNIDRSIIQQGANGT 174
CG+S + SC Y N FPWHV G+ S Q V+ V HEG++ TG N++A+I + + D VLP+C D IQ+G + T
Sbjct: 14 NCGVSNDLGNSCKMQKAGSEGYFDNAVFPWHVYAGAGVFYYDSGYQDGYVKSFVAHEGYNPRTGENNLAIIGLRDRLVWNDRVLPICFTDDYLPIQEGQSAT 115
BLAST of EMLSAG00000009325 vs. L. salmonis peptides
Match: EMLSAP00000012120 (pep:novel supercontig:LSalAtl2s:LSalAtl2s86:692955:707462:1 gene:EMLSAG00000012120 transcript:EMLSAT00000012120 description:"maker-LSalAtl2s86-augustus-gene-7.21") HSP 1 Score: 56.9954 bits (136), Expect = 4.805e-10 Identity = 30/62 (48.39%), Postives = 36/62 (58.06%), Query Frame = 0
Query: 16 SIVWSKNCETTDGHSCVFPFEYGNRKYTICTTVDKLGSPWCATYT-PYKHGY--WGYCPTSC 74
S + S+ C T +G +CVFPF YG Y CT+VD PWCAT T P H Y +G C SC
Sbjct: 632 STLSSEVCGTINGKACVFPFVYGEVSYKACTSVDNNDVPWCATSTNPSNHQYISYGNCKQSC 693
BLAST of EMLSAG00000009325 vs. L. salmonis peptides
Match: EMLSAP00000010902 (pep:novel supercontig:LSalAtl2s:LSalAtl2s729:156015:158047:1 gene:EMLSAG00000010902 transcript:EMLSAT00000010902 description:"augustus_masked-LSalAtl2s729-processed-gene-1.0") HSP 1 Score: 54.6842 bits (130), Expect = 1.771e-9 Identity = 27/72 (37.50%), Postives = 36/72 (50.00%), Query Frame = 0
Query: 17 IVWSKNCETTDGHSCVFPFEYGNRKYTICTTVDKLGSPWCATYTPYKHGY--WGYCPTSCYTCGLSASISRS 86
+ C TDG+SC+FPF Y + Y+ CT VD G+PWCAT Y +G C C A +R+
Sbjct: 163 VTSGNGCTXTDGNSCIFPFVYNGKTYSTCTVVDNSGTPWCATSVDASRKYLTFGNCGNFCSADNDPAPTTRA 234
BLAST of EMLSAG00000009325 vs. nr
Match: gi|974109313|ref|XP_015253776.1| (PREDICTED: macrophage mannose receptor 1-like [Cyprinodon variegatus]) HSP 1 Score: 61.2326 bits (147), Expect = 8.956e-8 Identity = 39/120 (32.50%), Postives = 54/120 (45.00%), Query Frame = 0
Query: 28 GHSCVFPFEYGNRKYTICTTVDKLGSPWCATYTPYKHGYWGYCPTSCYTCGLSASISRSCNDDVLRYASNPDFPWHVQVGSSKMIEQSDIQILD----------VEKTVIHEGFDETTGV 137
G C+FPF Y N+ Y+ CT+ ++ PWCA T Y+H WGYCPT+ I N V + +N W S K S + I D +E IH+G+ TG+
Sbjct: 150 GRPCMFPFYYNNQWYSDCTSEER---PWCAVETKYEHEMWGYCPTNTK----DKWIRHPTNGAVYQLNTNSALTWWEAEKSCKQQSASLLSITDPNEQAYITALLEPGGIHQGYKLWTGL 262 The following BLAST results are available for this feature:
BLAST of EMLSAG00000009325 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000009325 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000009325 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 25
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BLAST of EMLSAG00000009325 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000009325 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000009325 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 1
BLAST of EMLSAG00000009325 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s595:738044..740181- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000009325-692091 ID=EMLSAG00000009325-692091|Name=EMLSAG00000009325|organism=Lepeophtheirus salmonis|type=gene|length=2138bp|location=Sequence derived from alignment at LSalAtl2s595:738044..740181- (Lepeophtheirus salmonis)back to top Add to Basket
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