EMLSAG00000010920, EMLSAG00000010920-693686 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000010920 vs. GO
Match: - (symbol:ZBED4 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization activity" evidence=IEA] InterPro:IPR003656 InterPro:IPR008906 InterPro:IPR012337 Pfam:PF02892 Pfam:PF05699 PROSITE:PS50808 SMART:SM00614 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 SUPFAM:SSF53098 TreeFam:TF322818 OMA:HPTVLIQ OrthoDB:EOG74R1QQ GeneTree:ENSGT00530000063354 EMBL:AAEX03007146 RefSeq:XP_005625792.1 RefSeq:XP_005625793.1 RefSeq:XP_005625794.1 RefSeq:XP_005625795.1 Ensembl:ENSCAFT00000001110 GeneID:481197 Uniprot:F1PWQ3) HSP 1 Score: 42.3578 bits (98), Expect = 1.511e-4 Identity = 23/68 (33.82%), Postives = 40/68 (58.82%), Query Frame = 0 Query: 1 MNLIVSKGLAE---IKSTIDKVKLIVEYVRRSTVALDKLKVTQKQMGLSESRLMQDYPTRSNGTFYML 65 +NL+VS+ + +++ + + I E V RS A +KL QK+ L + L+QD P++ N +F+ML Sbjct: 824 VNLVVSEAIKSQRMVQNLLSIARKICERVHRSPKAKEKLAELQKEYELPQHHLIQDVPSKWNTSFHML 891
BLAST of EMLSAG00000010920 vs. C. finmarchicus
Match: gi|592896725|gb|GAXK01061650.1| (TSA: Calanus finmarchicus comp3740626_c0_seq1 transcribed RNA sequence) HSP 1 Score: 33.8834 bits (76), Expect = 2.450e-2 Identity = 17/56 (30.36%), Postives = 31/56 (55.36%), Query Frame = 0 Query: 7 KGLAEIKSTIDKVKLIVEYVRRSTVALDKLKVTQKQMGLSESRLMQDYPTRSNGTF 62 K + + + + K KLI ++ +STVA+D+L+ K+MG+ + TR + F Sbjct: 34 KNVPGMTAVLSKGKLIAKFCHQSTVAMDQLRDAAKKMGIDFRKPQNPNKTRWDSQF 201
BLAST of EMLSAG00000010920 vs. C. finmarchicus
Match: gi|592799649|gb|GAXK01154919.1| (TSA: Calanus finmarchicus comp703280_c0_seq1 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 6.130e-1 Identity = 21/71 (29.58%), Postives = 34/71 (47.89%), Query Frame = 0 Query: 1 MNLIVSKGLAE---IKSTIDKVKLIVEYVRRSTVALDKLKVTQKQMGLSESR---LMQDYPTRSNGTFYML 65 + L++ L E IK+ I + I + +S + Q + G +S+ L+QD PTR N +F ML Sbjct: 597 LQLVIKDELFEKPSIKALIKTCRHICTFANQSVQLSQSVVTKQIEAGKEKSQCLLLLQDVPTRWNSSFLML 809
BLAST of EMLSAG00000010920 vs. C. finmarchicus
Match: gi|592897215|gb|GAXK01061160.1| (TSA: Calanus finmarchicus comp783181_c1_seq2 transcribed RNA sequence) HSP 1 Score: 26.5646 bits (57), Expect = 7.766e+0 Identity = 17/58 (29.31%), Postives = 31/58 (53.45%), Query Frame = 0 Query: 3 LIVSKGLAEIKSTIDKVKLIVEYVRRSTVALDKLKVTQ-----KQMGLSESRLMQDYP 55 + ++K +AEI IDK K +E+ ++ + LD+++++ K G R DYP Sbjct: 1918 IALTKPMAEIMQIIDKNKEQIEFAKKE-IDLDQVEISNFEDSLKFSGFVLERQNLDYP 2088
BLAST of EMLSAG00000010920 vs. L. salmonis peptides
Match: EMLSAP00000010920 (pep:novel supercontig:LSalAtl2s:LSalAtl2s72:719949:720232:-1 gene:EMLSAG00000010920 transcript:EMLSAT00000010920 description:"snap_masked-LSalAtl2s72-processed-gene-6.4") HSP 1 Score: 131.724 bits (330), Expect = 1.398e-41 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 Query: 1 MNLIVSKGLAEIKSTIDKVKLIVEYVRRSTVALDKLKVTQKQMGLSESRLMQDYPTRSNGTFYML 65 MNLIVSKGLAEIKSTIDKVKLIVEYVRRSTVALDKLKVTQKQMGLSESRLMQDYPTRSNGTFYML Sbjct: 1 MNLIVSKGLAEIKSTIDKVKLIVEYVRRSTVALDKLKVTQKQMGLSESRLMQDYPTRSNGTFYML 65
BLAST of EMLSAG00000010920 vs. Select Arthropod Genomes
Match: gb|EEC20081.1| (conserved hypothetical protein [Ixodes scapularis]) HSP 1 Score: 48.9062 bits (115), Expect = 8.627e-8 Identity = 26/69 (37.68%), Postives = 41/69 (59.42%), Query Frame = 0 Query: 1 MNLIV----SKGLAEIKSTIDKVKLIVEYVRRSTVALDKLKVTQKQMGLSESRLMQDYPTRSNGTFYML 65 +NL+V +K AE++ T+ + IV + R S A +L+ Q + GL +L+QD PT+ N TFYM+ Sbjct: 11 LNLVVKALLTKSGAELEETLKAARAIVGHFRHSASAQRQLEAIQLRHGLPVHKLLQDVPTKWNSTFYMV 79
BLAST of EMLSAG00000010920 vs. nr
Match: gi|642071523|emb|CDQ88504.1| (unnamed protein product [Oncorhynchus mykiss]) HSP 1 Score: 66.2402 bits (160), Expect = 3.495e-12 Identity = 35/65 (53.85%), Postives = 40/65 (61.54%), Query Frame = 0 Query: 1 MNLIVSKGLAEIKSTIDKVKLIVEYVRRSTVALDKLKVTQKQMGLSESRLMQDYPTRSNGTFYML 65 + LIV L +K T+ KVK VE RSTV +KLK TQ QMG+ E R QD TR N TFYML Sbjct: 39 IKLIVRDALKVMKPTVHKVKAAVENFHRSTVGAEKLKFTQCQMGMPELRPKQDCTTRWNSTFYML 103
BLAST of EMLSAG00000010920 vs. nr
Match: gi|1130003275|ref|XP_019716757.1| (PREDICTED: zinc finger BED domain-containing protein 4-like [Hippocampus comes]) HSP 1 Score: 65.4698 bits (158), Expect = 1.679e-11 Identity = 35/65 (53.85%), Postives = 44/65 (67.69%), Query Frame = 0 Query: 1 MNLIVSKGLAEIKSTIDKVKLIVEYVRRSTVALDKLKVTQKQMGLSESRLMQDYPTRSNGTFYML 65 +NL+V L +K T DKVK IVE+ RST A KLK TQ+QMG+ E +L Q+ TR N TF+ML Sbjct: 67 LNLVVRDALKVMKPTADKVKGIVEFFHRSTTATQKLKSTQQQMGMPELKLKQECITRWNSTFHML 131
BLAST of EMLSAG00000010920 vs. nr
Match: gi|1035237249|ref|XP_016891160.1| (PREDICTED: LOW QUALITY PROTEIN: zinc finger BED domain-containing protein 1-like [Cynoglossus semilaevis]) HSP 1 Score: 66.6254 bits (161), Expect = 2.159e-11 Identity = 34/65 (52.31%), Postives = 43/65 (66.15%), Query Frame = 0 Query: 1 MNLIVSKGLAEIKSTIDKVKLIVEYVRRSTVALDKLKVTQKQMGLSESRLMQDYPTRSNGTFYML 65 +NLIV L EI+ + K+K +VEY +RSTVA DKLK Q+QMG + L QD T N T+YML Sbjct: 172 LNLIVRAALKEIQDILQKIKAVVEYFQRSTVASDKLKAIQQQMGQEQLCLRQDVATSWNSTYYML 236
BLAST of EMLSAG00000010920 vs. nr
Match: gi|1129905481|ref|XP_019721301.1| (PREDICTED: zinc finger BED domain-containing protein 4-like [Hippocampus comes]) HSP 1 Score: 64.6994 bits (156), Expect = 9.034e-11 Identity = 35/65 (53.85%), Postives = 44/65 (67.69%), Query Frame = 0 Query: 1 MNLIVSKGLAEIKSTIDKVKLIVEYVRRSTVALDKLKVTQKQMGLSESRLMQDYPTRSNGTFYML 65 +NL+V L +K T DKVK IVE+ RST A KLK TQ+QMG+ E +L Q+ TR N TF+ML Sbjct: 156 LNLVVRDALKVMKPTADKVKGIVEFFHRSTTATQKLKSTQQQMGMPELKLKQECITRWNSTFHML 220
BLAST of EMLSAG00000010920 vs. nr
Match: gi|1130204336|ref|XP_019773035.1| (PREDICTED: zinc finger BED domain-containing protein 1-like [Dendroctonus ponderosae]) HSP 1 Score: 62.7734 bits (151), Expect = 5.453e-10 Identity = 32/65 (49.23%), Postives = 43/65 (66.15%), Query Frame = 0 Query: 1 MNLIVSKGLAEIKSTIDKVKLIVEYVRRSTVALDKLKVTQKQMGLSESRLMQDYPTRSNGTFYML 65 +NL+V GL I S ++K+K IV + +RS+ AL KLK TQ QMGL E ++ QD TR N T M+ Sbjct: 292 INLMVQNGLKSINSILEKLKTIVSFFKRSSSALAKLKTTQLQMGLPELKIKQDVKTRWNSTLNMV 356
BLAST of EMLSAG00000010920 vs. nr
Match: gi|914570852|gb|KOB74120.1| (Uncharacterized protein OBRU01_02555 [Operophtera brumata]) HSP 1 Score: 62.7734 bits (151), Expect = 5.615e-10 Identity = 33/68 (48.53%), Postives = 45/68 (66.18%), Query Frame = 0 Query: 1 MNLIVSKGLA--EIKSTIDKVKLIVEYVRRSTVALDKLKVTQKQMGLSES-RLMQDYPTRSNGTFYML 65 +NL+V L E+K+TID VK IV Y +RST A++KL Q Q G+++ RL+Q PTR N F+ML Sbjct: 287 LNLVVENALEVEEVKTTIDTVKCIVSYYKRSTTAMEKLLRYQIQTGVAQPKRLLQSVPTRWNSVFFML 354
BLAST of EMLSAG00000010920 vs. nr
Match: gi|761911971|ref|XP_011405235.1| (PREDICTED: zinc finger BED domain-containing protein 1-like [Amphimedon queenslandica]) HSP 1 Score: 62.003 bits (149), Expect = 9.716e-10 Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 0 Query: 1 MNLIVSKGLA---EIKSTIDKVKLIVEYVRRSTVALDKLKVTQKQMGLSESRLMQDYPTRSNGTFYML 65 +NLIVS L+ E +S I VK IV + RRST A+DKL V Q ++ + + +L+QD TR N FYML Sbjct: 157 LNLIVSNSLSSVPEAQSLIQSVKNIVTFFRRSTKAMDKLTVMQSRLNIPQHKLIQDIETRWNSVFYML 224
BLAST of EMLSAG00000010920 vs. nr
Match: gi|985413578|ref|XP_015372282.1| (PREDICTED: zinc finger BED domain-containing protein 1-like [Diuraphis noxia]) HSP 1 Score: 60.4622 bits (145), Expect = 3.371e-9 Identity = 34/66 (51.52%), Postives = 43/66 (65.15%), Query Frame = 0 Query: 1 MNLIVSKGLAEIKSTIDKVKLIVEYVRRSTVALDKLKVTQKQMGLSE-SRLMQDYPTRSNGTFYML 65 +NLIV L +IK T KVK IVEY +RST+A +KL Q+Q+G S L+QD TR N TF+M Sbjct: 276 LNLIVQSSLDQIKETRVKVKSIVEYFKRSTLATEKLNQMQEQLGYSPVHTLIQDVVTRWNSTFHMF 341
BLAST of EMLSAG00000010920 vs. nr
Match: gi|1070196823|ref|XP_018368704.1| (PREDICTED: zinc finger BED domain-containing protein 1-like [Trachymyrmex cornetzi]) HSP 1 Score: 59.3066 bits (142), Expect = 9.095e-9 Identity = 31/67 (46.27%), Postives = 42/67 (62.69%), Query Frame = 0 Query: 1 MNLIVSKGL--AEIKSTIDKVKLIVEYVRRSTVALDKLKVTQKQMGLSESRLMQDYPTRSNGTFYML 65 +NL+ L +K + VK IV Y R STVA+DKL+ QKQ+ E +L+QD PTR N +FYM+ Sbjct: 267 INLVALDALETTSVKPILKHVKDIVTYFRCSTVAMDKLRNMQKQLHKKEFKLLQDTPTRWNSSFYMI 333
BLAST of EMLSAG00000010920 vs. nr
Match: gi|914576302|gb|KOB78200.1| (Uncharacterized protein OBRU01_02883 [Operophtera brumata]) HSP 1 Score: 58.9214 bits (141), Expect = 9.461e-9 Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 0 Query: 1 MNLIVSKGLAEIKSTIDKVKLIVEYVRRSTVALDKLKVTQKQMGLSESRLMQDYPTRSNGTFYML 65 +NLIV G+ EI+ T V+ IV + RRS A +LK TQ++MGLS +L D PTR N T ML Sbjct: 81 LNLIVQAGVKEIEETGRNVRAIVTFFRRSAHASAQLKATQERMGLSMLKLKIDVPTRWNSTMLML 145 The following BLAST results are available for this feature:
BLAST of EMLSAG00000010920 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 1
BLAST of EMLSAG00000010920 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 3
BLAST of EMLSAG00000010920 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000010920 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000010920 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 1
BLAST of EMLSAG00000010920 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000010920 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s72:719949..720232- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000010920-693686 ID=EMLSAG00000010920-693686|Name=EMLSAG00000010920|organism=Lepeophtheirus salmonis|type=gene|length=284bp|location=Sequence derived from alignment at LSalAtl2s72:719949..720232- (Lepeophtheirus salmonis)back to top Add to Basket
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