EMLSAG00000011124, EMLSAG00000011124-693890 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000011124 vs. C. finmarchicus
Match: gi|592801033|gb|GAXK01153535.1| (TSA: Calanus finmarchicus comp636740_c0_seq3 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 3.026e+0 Identity = 24/85 (28.24%), Postives = 39/85 (45.88%), Query Frame = 0 Query: 86 YLFFNKCAWNQYDACHAGIPR------SSN--IVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRK 162 Y+F N N + CHAG+ + +SN ++E + QS E + WN + + +D+ C +LF+K P K K Sbjct: 230 YVFANHVCSN-FCVCHAGLLK*STELFTSN*GVIELDF--LQS*KRLDEQSFWNKRKKVLTQIYFLDDSRCGYLFKKGHPVKVMK 475
BLAST of EMLSAG00000011124 vs. C. finmarchicus
Match: gi|592801034|gb|GAXK01153534.1| (TSA: Calanus finmarchicus comp636740_c0_seq2 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 3.348e+0 Identity = 24/85 (28.24%), Postives = 39/85 (45.88%), Query Frame = 0 Query: 86 YLFFNKCAWNQYDACHAGIPR------SSN--IVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRK 162 Y+F N N + CHAG+ + +SN ++E + QS E + WN + + +D+ C +LF+K P K K Sbjct: 316 YVFANHVCSN-FCVCHAGLLK*STELFTSN*GVIELDF--LQS*KRLDEQSFWNKRKKVLTQIYFLDDSRCGYLFKKGHPVKVMK 561
BLAST of EMLSAG00000011124 vs. L. salmonis peptides
Match: EMLSAP00000011124 (pep:novel supercontig:LSalAtl2s:LSalAtl2s755:122472:146910:1 gene:EMLSAG00000011124 transcript:EMLSAT00000011124 description:"snap_masked-LSalAtl2s755-processed-gene-1.11") HSP 1 Score: 422.55 bits (1085), Expect = 7.574e-152 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0 Query: 1 MDERSLIIFIQNNKIAIIKSIKERRRRKKPRIFTFALGPIHAKTEYKRPVICSPRALRFLKPTLSSDTEVFSRYFEDTWIGTSSAYLFFNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRKWIQFYLQLKTIIDDFDNNDLLDYVKTLGHKCVFKCGHLPN 202 MDERSLIIFIQNNKIAIIKSIKERRRRKKPRIFTFALGPIHAKTEYKRPVICSPRALRFLKPTLSSDTEVFSRYFEDTWIGTSSAYLFFNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRKWIQFYLQLKTIIDDFDNNDLLDYVKTLGHKCVFKCGHLPN Sbjct: 1 MDERSLIIFIQNNKIAIIKSIKERRRRKKPRIFTFALGPIHAKTEYKRPVICSPRALRFLKPTLSSDTEVFSRYFEDTWIGTSSAYLFFNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRKWIQFYLQLKTIIDDFDNNDLLDYVKTLGHKCVFKCGHLPN 202
BLAST of EMLSAG00000011124 vs. L. salmonis peptides
Match: EMLSAP00000001273 (pep:novel supercontig:LSalAtl2s:LSalAtl2s120:217853:218407:-1 gene:EMLSAG00000001273 transcript:EMLSAT00000001273 description:"augustus_masked-LSalAtl2s120-processed-gene-2.0") HSP 1 Score: 162.54 bits (410), Expect = 6.193e-50 Identity = 76/123 (61.79%), Postives = 90/123 (73.17%), Query Frame = 0 Query: 55 RALRFLKPTLSSDTEVFSRYFEDTWIGTSSAYLFFNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRKWIQFYLQLKTIIDDF 177 R LKPTL D + FSRY EDTWIGT S F++ +WNQYDACHAGIPRSSN++EGW+HGFQSL NCA PTIW M+ I+LE + DNKI QHL R+ P +KRK IQF QLKTI++ Sbjct: 62 RDWXLLKPTLLLDMKAFSRYLEDTWIGTFSNEPLFSQLSWNQYDACHAGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQAITDNKIVQHLRRQPPYPRKRKLIQFDYQLKTIVEQL 184
BLAST of EMLSAG00000011124 vs. L. salmonis peptides
Match: EMLSAP00000005547 (pep:novel supercontig:LSalAtl2s:LSalAtl2s297:424290:425573:-1 gene:EMLSAG00000005547 transcript:EMLSAT00000005547 description:"augustus_masked-LSalAtl2s297-processed-gene-4.3") HSP 1 Score: 62.003 bits (149), Expect = 5.249e-12 Identity = 42/149 (28.19%), Postives = 65/149 (43.62%), Query Frame = 0 Query: 49 PVICSPRALRFLKPTLSSDTEVFSRYFEDTWIG-----TSSAYLFFNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRKWIQFYLQLKTIIDDFDN-NDLLDYVKTLGH 191 PV + L T+ + YFEDT+IG F WN D G+ R+ N VEGWY FQ + P +W ++ + E L D+ I + + K P+++ Q Y I+ D+DN LD++K + + Sbjct: 136 PVDQTIEVFEALSETMPDIGQPIIDYFEDTYIGRLQLQERRQEPSFLHTIWNVRDRIIDGLSRNDNSVEGWYRHFQVNIGSQHPNLWEFIDILHREQSLNDDVITRMMAGKEAPTQRGINKQIYY----IVADYDNYRTKLDFLKEIAY 280
BLAST of EMLSAG00000011124 vs. L. salmonis peptides
Match: EMLSAP00000008977 (pep:novel supercontig:LSalAtl2s:LSalAtl2s560:196643:207767:1 gene:EMLSAG00000008977 transcript:EMLSAT00000008977 description:"snap_masked-LSalAtl2s560-processed-gene-1.5") HSP 1 Score: 55.4546 bits (132), Expect = 1.750e-9 Identity = 30/107 (28.04%), Postives = 54/107 (50.47%), Query Frame = 0 Query: 74 YFEDTWIGTSSAYLF-----FNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRKWIQFYLQLKTIID 175 Y ED WIG + + F+ WN Y A G +++N +GW+ F LV + P IW ++ ++ E + I Q++ P+KK+K+ L+++ I++ Sbjct: 95 YLEDIWIGRPTGNITQRPPRFSHALWNCYAAAREGGSKTNNSCKGWHCSFNELVRASHPAIWKFLDILKNESL-----IEQYVAGGEIPTKKKKYKDTALRIQRIVE 196
BLAST of EMLSAG00000011124 vs. L. salmonis peptides
Match: EMLSAP00000005767 (pep:novel supercontig:LSalAtl2s:LSalAtl2s30:850469:898828:1 gene:EMLSAG00000005767 transcript:EMLSAT00000005767 description:"augustus-LSalAtl2s30-processed-gene-9.8") HSP 1 Score: 50.0618 bits (118), Expect = 7.730e-8 Identity = 29/91 (31.87%), Postives = 41/91 (45.05%), Query Frame = 0 Query: 56 ALRFLKPTLSSDTEVFSRYFEDTWIGTSSAYLF----FNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVL 142 A L T D VF+ YFED +IG + WN G+PR +N +E W+ FQ + C P++W + TI E+ L Sbjct: 152 AFEILTETFPEDLRVFADYFEDNYIGRYMGRTGREPRYPLALWNI--RSEEGLPRINNSIESWHMVFQHSMQCKHPSLWKFLQTIIKENGL 240
BLAST of EMLSAG00000011124 vs. Select Arthropod Genomes
Match: gb|EEC03091.1| (hypothetical protein IscW_ISCW002834 [Ixodes scapularis]) HSP 1 Score: 56.9954 bits (136), Expect = 1.295e-9 Identity = 33/126 (26.19%), Postives = 61/126 (48.41%), Query Frame = 0 Query: 74 YFEDTWIGTSSAY----LFFNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRKWIQFYLQLKTIIDDFDNNDLLDYVKTLGHKCVF 195 YFED +IG +A F WN +D G +++N VE W+ FQ+ V C+ PT+W + ++ E L +++ + L + K+ + +LKT+ +D +D+ ++ + F Sbjct: 34 YFEDVFIGRLTARGRRDAQFPIKLWNHHDTVLQGGSKTTNSVEAWHRSFQAHVQCSHPTLWRFLEVLQREDALQLHRLGR-LEMGQRFKQASKYAKAAERLKTLARQYDASDVRRSLRGVARNVSF 158
BLAST of EMLSAG00000011124 vs. nr
Match: gi|1101348172|ref|XP_018899952.1| (PREDICTED: uncharacterized protein LOC109032335 [Bemisia tabaci]) HSP 1 Score: 69.707 bits (169), Expect = 8.395e-12 Identity = 40/147 (27.21%), Postives = 72/147 (48.98%), Query Frame = 0 Query: 59 FLKPTLSSDTEVFSRYFEDTWIGTSSAYLF---------FNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQ-HLFRKSPPSKKRKWIQFYLQLKTIIDDFDNNDL----LDYVKTLGH 191 LKPTL E ++YF+ T++ S + ++ WN Y + PR++N EGW++ FQSLV P+I+ + E V + +I + RK ++ K+ + ++L+TI+ ++ + LDY + +GH Sbjct: 1 MLKPTLPQSMEELAKYFDRTYVNGSRELVRRRYRVQPPRYSPVLWNHYQSVLHDGPRTNNATEGWHNRFQSLVGKNHPSIYYLLRQFLKEQVDTEKQIIEIQAGRKVRKPREAKYERLNIRLRTIVSRYEEHKTERTELDYFRAIGH 147
BLAST of EMLSAG00000011124 vs. nr
Match: gi|780033157|ref|XP_011666988.1| (PREDICTED: uncharacterized protein LOC100890510 [Strongylocentrotus purpuratus] >gi|780066417|ref|XP_011671018.1| PREDICTED: uncharacterized protein LOC100888013 [Strongylocentrotus purpuratus]) HSP 1 Score: 72.7886 bits (177), Expect = 1.106e-11 Identity = 46/189 (24.34%), Postives = 86/189 (45.50%), Query Frame = 0 Query: 10 IQNNKIAIIKSIKERRRRKKPRIFTFALGPIHAKTEYKRPVICSPRALRFLKPTLSSDTEVFSRYFEDTWIGTSSAYLFFNKCA-------WNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRKWIQFYLQLKTIIDDFDNNDLLDYVKTLGH 191 I+ + ++ + E R + I A P+ E + RA L+P L+ YFEDT++G + A WN ++A G R++N VEGW+ FQ V P+ W + ++ EH + + I Q +PP+++R + L+L ++ ++ D++D+++ + H Sbjct: 233 IKQEGLQVLYNEDEEIRTQARMIGAIAFVPVEDTVEAFEALAGIARAE--LQPVLN--------YFEDTYVGRPQRAAGHGRQAARFPPIMWNMFNATLQGEFRTNNHVEGWHRRFQIGVGADHPSFWQFLTCLKREHAMNEVTIGQAQAGMAPPARRRVYQDTNLRLIRLVTNYHGRDIVDFLRGVSH 411
BLAST of EMLSAG00000011124 vs. nr
Match: gi|391331285|ref|XP_003740080.1| (PREDICTED: uncharacterized protein LOC100898251 [Galendromus occidentalis]) HSP 1 Score: 72.4034 bits (176), Expect = 1.139e-11 Identity = 35/125 (28.00%), Postives = 61/125 (48.80%), Query Frame = 0 Query: 71 FSRYFEDTWIGTSSAYLFFNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRKWIQFYLQLKTIIDDFDNNDLLDYVKTLGHKCVF 195 F YFE TWIG F WN Y+A GI R++N VEGW+ FQ + + PT + + ++LE +++ + R + KR + +L +++ ++N D ++Y+ + F Sbjct: 219 FVNYFEKTWIGREFGAAVFPLEWWNSYEATRQGIARTNNAVEGWHSAFQRRLGSSNPTFYKLIEQLKLEQGMMEFGVDNTAARGNDTPPKRVYRDRQRRLNELVESYENYDRIEYLTAVAQNIKF 343
BLAST of EMLSAG00000011124 vs. nr
Match: gi|985422810|ref|XP_015376870.1| (PREDICTED: uncharacterized protein LOC107171149 [Diuraphis noxia]) HSP 1 Score: 71.633 bits (174), Expect = 3.012e-11 Identity = 40/126 (31.75%), Postives = 69/126 (54.76%), Query Frame = 0 Query: 71 FSRYFEDTWIGTSSAYLF-----FNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRKWIQFYLQLKTIIDDFDNNDLLDYVKTLGH 191 + YFEDTWI + F+ WNQYDA A P+++N VEGW+ F SL+ + PTIW ++TI+ E + KI Q + + +KK+ + + ++K I++ + ++ +Y+ + H Sbjct: 341 LTDYFEDTWIXRPNRRRTRRPPTFSLALWNQYDATLADXPKTNNSVEGWHRAFSSLLGASHPTIWRLIDTIKKEQGSTEAKIIQLIAGQEQVAKKKXYTKTTTRIKKIVNSYHERNINEYLIGIAH 466
BLAST of EMLSAG00000011124 vs. nr
Match: gi|1101358910|ref|XP_018905713.1| (PREDICTED: uncharacterized protein LOC109036188 [Bemisia tabaci]) HSP 1 Score: 70.4774 bits (171), Expect = 7.804e-11 Identity = 40/151 (26.49%), Postives = 74/151 (49.01%), Query Frame = 0 Query: 55 RALRFLKPTLSSDTEVFSRYFEDTWIGTSSAYLF---------FNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQ-HLFRKSPPSKKRKWIQFYLQLKTIIDDFDNNDL----LDYVKTLGH 191 R LKPTL E ++YF+ T++ S + ++ WN Y + PR++N EGW++ FQSL+ P+I+ + E V + +I + RK ++ K+ + ++L+TI+ ++ + LDY++ +GH Sbjct: 225 RVFNMLKPTLPQSMEELAKYFDRTYVNGSRELVRRRYRVQPPRYSPVLWNHYQSVLHDEPRTNNATEGWHNRFQSLIGKNHPSIYYLLRQFLKEQVDTEKQIIEIQAGRKVRKPREAKYERLNIRLRTIVSRYEEHKTERTELDYLRAIGH 375
BLAST of EMLSAG00000011124 vs. nr
Match: gi|970897665|ref|XP_015114401.1| (PREDICTED: uncharacterized protein LOC107039349 [Diachasma alloeum]) HSP 1 Score: 69.707 bits (169), Expect = 1.438e-10 Identity = 39/127 (30.71%), Postives = 67/127 (52.76%), Query Frame = 0 Query: 74 YFEDTWIGTSSAYLF----FNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRK-WIQFYLQLKTIIDDFDNNDLLDYVKTLGHKCVF 195 YFE TWIG A F F WN Y++ PR++N VEGW+H F ++ A +I +N ++ E + I Q ++ SKKRK + Q+ +L I+ +D+ ++++Y++ + + V Sbjct: 263 YFEPTWIGKKGARKFGPPKFAHEIWNHYESVLNDNPRTNNSVEGWHHIFNETISRAHTSIGEFINCLKAEQSRTEVLIVQEEAGQTIQSKKRKRYAQYDERLINIVKTYDDIEIVEYLRRIAYNIVL 389
BLAST of EMLSAG00000011124 vs. nr
Match: gi|675876620|ref|XP_009023870.1| (hypothetical protein HELRODRAFT_177435 [Helobdella robusta] >gi|555694955|gb|ESN98187.1| hypothetical protein HELRODRAFT_177435 [Helobdella robusta]) HSP 1 Score: 68.5514 bits (166), Expect = 1.508e-10 Identity = 27/86 (31.40%), Postives = 51/86 (59.30%), Query Frame = 0 Query: 112 EGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRKWIQFYLQLKTIIDDFDNNDLLDYVKTLGHKCVFKC 197 +GW+ F L+ + PT+W +++++ E L + KI Q++ +PP K+ + +++K I+ D+DN D +DY++ L H FK Sbjct: 162 DGWHRAFSELIGASHPTVWKFISSLKDEQALNEGKIEQYVAGANPPPSKKVYRDTAVRIKRIVQDYDNRDRMDYLRGLAHNFNFKA 247
BLAST of EMLSAG00000011124 vs. nr
Match: gi|780177498|ref|XP_003731810.2| (PREDICTED: uncharacterized protein LOC100892982, partial [Strongylocentrotus purpuratus]) HSP 1 Score: 69.3218 bits (168), Expect = 1.912e-10 Identity = 45/184 (24.46%), Postives = 83/184 (45.11%), Query Frame = 0 Query: 10 IQNNKIAIIKSIKERRRRKKPRIFTFALGPIHAKTEYKRPVICSPRALRFLKPTLSSDTEVFSRYFEDTWIGTSSAYLFFNKCA-------WNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRKWIQFYLQLKTIIDDFDNNDLLDYV 186 I+ + ++ + E R + I A P+ E + RA L+P L+ YFEDT++G + A WN ++A G R++N VEGW+ FQ V P+ W + ++ EH + + I Q +PP+++R + L+L ++ ++ D++D++ Sbjct: 233 IKQEGLQVLYNEDEEIRTQARMIGAIAFVPVEDTVEAFEALAGIARAE--LQPVLN--------YFEDTYVGRPQRAAGHGRQAARFPPIMWNMFNATLQGEFRTNNHVEGWHRRFQIGVGADHPSFWQFLTCLKREHAMNEVTIGQAQAGMAPPARRRVYQDTNLRLIRLVTNYHGRDIVDFL 406
BLAST of EMLSAG00000011124 vs. nr
Match: gi|749716840|gb|KII65317.1| (hypothetical protein RF11_02737 [Thelohanellus kitauei]) HSP 1 Score: 67.0106 bits (162), Expect = 3.072e-10 Identity = 36/87 (41.38%), Postives = 51/87 (58.62%), Query Frame = 0 Query: 74 YFEDTWIG----TSSAYLFFNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSP 156 YFED +IG S A F WNQY+ +PR++N +EGW++GF LVNC+ P I+ +++++ E LID KI LF P Sbjct: 121 YFEDNYIGRFGRLSRADPIFPISYWNQYNRVIENLPRTNNNLEGWHNGFNMLVNCSHPHIFQFLSSLKDEQSLIDVKIDNLLFVSVP 207
BLAST of EMLSAG00000011124 vs. nr
Match: gi|391348333|ref|XP_003748402.1| (PREDICTED: uncharacterized protein LOC100901000 [Galendromus occidentalis]) HSP 1 Score: 68.5514 bits (166), Expect = 3.154e-10 Identity = 42/163 (25.77%), Postives = 76/163 (46.63%), Query Frame = 0 Query: 31 RIFTFALGPIHAKTEYKRPVICSPRALRFLKPTLSSDTEVFSRYFEDTWIGTSSA----YLFFNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRKWIQFYLQLKTIIDDFDNNDLLDYVKTL 189 ++ A P EY +I S +F +S E+ +YF TW+G+ +A F + WN Y + + +PR++N VE W+ GF SL+ C P+IW + I+ ++ + + Q P K+R + LK + + F + + Y++ + Sbjct: 205 QLMALAFVPTERVYEYFEILINS----KFFIDNVSELDELL-QYFRKTWVGSRTANDQKRPIFVEELWNCYGSLQSDLPRTNNAVEAWHRGFDSLIMCCNPSIWKFIEAIKKDNSITKLRCDQLDAGFDRPRKRRCYKDVEKNLKVVAEKFGEKEAMSYIRAI 362 The following BLAST results are available for this feature:
BLAST of EMLSAG00000011124 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000011124 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 2
BLAST of EMLSAG00000011124 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 5
BLAST of EMLSAG00000011124 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000011124 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 1
BLAST of EMLSAG00000011124 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000011124 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s755:122472..146910+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000011124-693890 ID=EMLSAG00000011124-693890|Name=EMLSAG00000011124|organism=Lepeophtheirus salmonis|type=gene|length=24439bp|location=Sequence derived from alignment at LSalAtl2s755:122472..146910+ (Lepeophtheirus salmonis)back to top Add to Basket
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