EMLSAG00000011124, EMLSAG00000011124-693890 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000011124 vs. C. finmarchicus
Match: gi|592801033|gb|GAXK01153535.1| (TSA: Calanus finmarchicus comp636740_c0_seq3 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 3.026e+0 Identity = 24/85 (28.24%), Postives = 39/85 (45.88%), Query Frame = 0 Query: 86 YLFFNKCAWNQYDACHAGIPR------SSN--IVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRK 162 Y+F N N + CHAG+ + +SN ++E + QS E + WN + + +D+ C +LF+K P K K Sbjct: 230 YVFANHVCSN-FCVCHAGLLK*STELFTSN*GVIELDF--LQS*KRLDEQSFWNKRKKVLTQIYFLDDSRCGYLFKKGHPVKVMK 475
BLAST of EMLSAG00000011124 vs. C. finmarchicus
Match: gi|592801034|gb|GAXK01153534.1| (TSA: Calanus finmarchicus comp636740_c0_seq2 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 3.348e+0 Identity = 24/85 (28.24%), Postives = 39/85 (45.88%), Query Frame = 0 Query: 86 YLFFNKCAWNQYDACHAGIPR------SSN--IVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRK 162 Y+F N N + CHAG+ + +SN ++E + QS E + WN + + +D+ C +LF+K P K K Sbjct: 316 YVFANHVCSN-FCVCHAGLLK*STELFTSN*GVIELDF--LQS*KRLDEQSFWNKRKKVLTQIYFLDDSRCGYLFKKGHPVKVMK 561
BLAST of EMLSAG00000011124 vs. L. salmonis peptides
Match: EMLSAP00000011124 (pep:novel supercontig:LSalAtl2s:LSalAtl2s755:122472:146910:1 gene:EMLSAG00000011124 transcript:EMLSAT00000011124 description:"snap_masked-LSalAtl2s755-processed-gene-1.11") HSP 1 Score: 422.55 bits (1085), Expect = 7.574e-152 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0 Query: 1 MDERSLIIFIQNNKIAIIKSIKERRRRKKPRIFTFALGPIHAKTEYKRPVICSPRALRFLKPTLSSDTEVFSRYFEDTWIGTSSAYLFFNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRKWIQFYLQLKTIIDDFDNNDLLDYVKTLGHKCVFKCGHLPN 202 MDERSLIIFIQNNKIAIIKSIKERRRRKKPRIFTFALGPIHAKTEYKRPVICSPRALRFLKPTLSSDTEVFSRYFEDTWIGTSSAYLFFNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRKWIQFYLQLKTIIDDFDNNDLLDYVKTLGHKCVFKCGHLPN Sbjct: 1 MDERSLIIFIQNNKIAIIKSIKERRRRKKPRIFTFALGPIHAKTEYKRPVICSPRALRFLKPTLSSDTEVFSRYFEDTWIGTSSAYLFFNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRKWIQFYLQLKTIIDDFDNNDLLDYVKTLGHKCVFKCGHLPN 202
BLAST of EMLSAG00000011124 vs. L. salmonis peptides
Match: EMLSAP00000001273 (pep:novel supercontig:LSalAtl2s:LSalAtl2s120:217853:218407:-1 gene:EMLSAG00000001273 transcript:EMLSAT00000001273 description:"augustus_masked-LSalAtl2s120-processed-gene-2.0") HSP 1 Score: 162.54 bits (410), Expect = 6.193e-50 Identity = 76/123 (61.79%), Postives = 90/123 (73.17%), Query Frame = 0 Query: 55 RALRFLKPTLSSDTEVFSRYFEDTWIGTSSAYLFFNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRKWIQFYLQLKTIIDDF 177 R LKPTL D + FSRY EDTWIGT S F++ +WNQYDACHAGIPRSSN++EGW+HGFQSL NCA PTIW M+ I+LE + DNKI QHL R+ P +KRK IQF QLKTI++ Sbjct: 62 RDWXLLKPTLLLDMKAFSRYLEDTWIGTFSNEPLFSQLSWNQYDACHAGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQAITDNKIVQHLRRQPPYPRKRKLIQFDYQLKTIVEQL 184
BLAST of EMLSAG00000011124 vs. L. salmonis peptides
Match: EMLSAP00000005547 (pep:novel supercontig:LSalAtl2s:LSalAtl2s297:424290:425573:-1 gene:EMLSAG00000005547 transcript:EMLSAT00000005547 description:"augustus_masked-LSalAtl2s297-processed-gene-4.3") HSP 1 Score: 62.003 bits (149), Expect = 5.249e-12 Identity = 42/149 (28.19%), Postives = 65/149 (43.62%), Query Frame = 0 Query: 49 PVICSPRALRFLKPTLSSDTEVFSRYFEDTWIG-----TSSAYLFFNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRKWIQFYLQLKTIIDDFDN-NDLLDYVKTLGH 191 PV + L T+ + YFEDT+IG F WN D G+ R+ N VEGWY FQ + P +W ++ + E L D+ I + + K P+++ Q Y I+ D+DN LD++K + + Sbjct: 136 PVDQTIEVFEALSETMPDIGQPIIDYFEDTYIGRLQLQERRQEPSFLHTIWNVRDRIIDGLSRNDNSVEGWYRHFQVNIGSQHPNLWEFIDILHREQSLNDDVITRMMAGKEAPTQRGINKQIYY----IVADYDNYRTKLDFLKEIAY 280
BLAST of EMLSAG00000011124 vs. L. salmonis peptides
Match: EMLSAP00000008977 (pep:novel supercontig:LSalAtl2s:LSalAtl2s560:196643:207767:1 gene:EMLSAG00000008977 transcript:EMLSAT00000008977 description:"snap_masked-LSalAtl2s560-processed-gene-1.5") HSP 1 Score: 55.4546 bits (132), Expect = 1.750e-9 Identity = 30/107 (28.04%), Postives = 54/107 (50.47%), Query Frame = 0 Query: 74 YFEDTWIGTSSAYLF-----FNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRKWIQFYLQLKTIID 175 Y ED WIG + + F+ WN Y A G +++N +GW+ F LV + P IW ++ ++ E + I Q++ P+KK+K+ L+++ I++ Sbjct: 95 YLEDIWIGRPTGNITQRPPRFSHALWNCYAAAREGGSKTNNSCKGWHCSFNELVRASHPAIWKFLDILKNESL-----IEQYVAGGEIPTKKKKYKDTALRIQRIVE 196
BLAST of EMLSAG00000011124 vs. L. salmonis peptides
Match: EMLSAP00000005767 (pep:novel supercontig:LSalAtl2s:LSalAtl2s30:850469:898828:1 gene:EMLSAG00000005767 transcript:EMLSAT00000005767 description:"augustus-LSalAtl2s30-processed-gene-9.8") HSP 1 Score: 50.0618 bits (118), Expect = 7.730e-8 Identity = 29/91 (31.87%), Postives = 41/91 (45.05%), Query Frame = 0 Query: 56 ALRFLKPTLSSDTEVFSRYFEDTWIGTSSAYLF----FNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVL 142 A L T D VF+ YFED +IG + WN G+PR +N +E W+ FQ + C P++W + TI E+ L Sbjct: 152 AFEILTETFPEDLRVFADYFEDNYIGRYMGRTGREPRYPLALWNI--RSEEGLPRINNSIESWHMVFQHSMQCKHPSLWKFLQTIIKENGL 240
BLAST of EMLSAG00000011124 vs. Select Arthropod Genomes
Match: gb|EEC03091.1| (hypothetical protein IscW_ISCW002834 [Ixodes scapularis]) HSP 1 Score: 56.9954 bits (136), Expect = 1.295e-9 Identity = 33/126 (26.19%), Postives = 61/126 (48.41%), Query Frame = 0 Query: 74 YFEDTWIGTSSAY----LFFNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRKWIQFYLQLKTIIDDFDNNDLLDYVKTLGHKCVF 195 YFED +IG +A F WN +D G +++N VE W+ FQ+ V C+ PT+W + ++ E L +++ + L + K+ + +LKT+ +D +D+ ++ + F Sbjct: 34 YFEDVFIGRLTARGRRDAQFPIKLWNHHDTVLQGGSKTTNSVEAWHRSFQAHVQCSHPTLWRFLEVLQREDALQLHRLGR-LEMGQRFKQASKYAKAAERLKTLARQYDASDVRRSLRGVARNVSF 158
BLAST of EMLSAG00000011124 vs. nr
Match: gi|675859784|ref|XP_009015452.1| (hypothetical protein HELRODRAFT_160216 [Helobdella robusta] >gi|555702851|gb|ESO06084.1| hypothetical protein HELRODRAFT_160216 [Helobdella robusta]) HSP 1 Score: 67.3958 bits (163), Expect = 3.894e-10 Identity = 26/84 (30.95%), Postives = 50/84 (59.52%), Query Frame = 0 Query: 112 EGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRKWIQFYLQLKTIIDDFDNNDLLDYVKTLGHKCVF 195 +GW+ F L+ + PT+W +++++ E L + KI Q++ +PP K+ + +++K I+ D+DN D +DY++ L H F Sbjct: 162 DGWHRAFSELIGASHPTVWKFISSLKDEQALNEGKIEQYVAGANPPPSKKVYRDMAVRIKRIVQDYDNRDRMDYLRELAHNFNF 245
BLAST of EMLSAG00000011124 vs. nr
Match: gi|985395492|ref|XP_015365198.1| (PREDICTED: uncharacterized protein LOC107162701 [Diuraphis noxia]) HSP 1 Score: 68.1662 bits (165), Expect = 4.595e-10 Identity = 46/136 (33.82%), Postives = 67/136 (49.26%), Query Frame = 0 Query: 63 TLSSDTEVFSRYFEDTWIGTSSAYLFFNKCA---------WNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRKWIQFYLQLKTIIDDFDNNDLLDYVKTL 189 TL SD F YFE TWIG L NK WN Y+ IP+++N VEGW++ F S +N P+IW + ++ E L K+ Q L P K +K+ ++K I +DF N + D++K + Sbjct: 295 TLLSD---FLDYFESTWIGK----LCRNKKXRNPRFPIELWNCYNLVKYDIPKTNNSVEGWHNSFNSTLNALHPSIWKFIEALKKEEKLNRLKMHQFLAGTEPRQKLKKYKDTASRVKAICNDFXNRSINDFLKGI 423
BLAST of EMLSAG00000011124 vs. nr
Match: gi|675862274|ref|XP_009016697.1| (hypothetical protein HELRODRAFT_171773 [Helobdella robusta] >gi|555702149|gb|ESO05382.1| hypothetical protein HELRODRAFT_171773 [Helobdella robusta]) HSP 1 Score: 66.2402 bits (160), Expect = 7.953e-10 Identity = 26/84 (30.95%), Postives = 50/84 (59.52%), Query Frame = 0 Query: 112 EGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRKWIQFYLQLKTIIDDFDNNDLLDYVKTLGHKCVF 195 +GW+ F L+ + PT+W +++++ E L + KI Q++ +PP K+ + +++K I+ D+DN D +DY++ L H F Sbjct: 162 DGWHRAFSELIGASHPTVWKFISSLKDEQALNEGKIEQYVAGANPPPSKKVYRDTAVRIKRIVQDYDNRDRMDYLRGLAHNFNF 245
BLAST of EMLSAG00000011124 vs. nr
Match: gi|641650887|ref|XP_008189914.1| (PREDICTED: uncharacterized protein LOC100571980 [Acyrthosiphon pisum]) HSP 1 Score: 66.6254 bits (161), Expect = 1.130e-9 Identity = 43/132 (32.58%), Postives = 66/132 (50.00%), Query Frame = 0 Query: 71 FSRYFEDTWIGTSSAYLFFNKC---------AWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKS--PPSKKRKWIQFYLQLKTIIDDFDNNDLLDYVKTLGH 191 F YFE TWIG L NK WN Y+ IP+++N VEGW++ F S +N P+IW + ++ E L N++ HLF P K +K+ ++K I +DF+N + D++K + Sbjct: 214 FLDYFESTWIGK----LCRNKKRRNPRFPIELWNCYNLVKYDIPKTNNSVEGWHNSFNSTLNALHPSIWKFIEALKKEEKL--NRLKMHLFLAGTEPRQKLKKYKDTASRIKAICNDFENRSINDFLKGIAQ 339
BLAST of EMLSAG00000011124 vs. nr
Match: gi|1061468469|gb|ODM88747.1| (hypothetical protein Ocin01_17935 [Orchesella cincta]) HSP 1 Score: 67.0106 bits (162), Expect = 1.227e-9 Identity = 35/96 (36.46%), Postives = 50/96 (52.08%), Query Frame = 0 Query: 65 SSDTEVFSRYFEDTWIGTS----SAYLFFNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSP 156 S D E Y ED WIG + + F+ WN + + R++N VEGW+ GFQS + A PTIW + TIR + L + ++ QHL +P Sbjct: 532 SRDMECLVDYVEDNWIGGNRRGKARPPRFDIAEWNYFHRVAEDLARTNNAVEGWHRGFQSQLGAAHPTIWKFIETIRKQQSLNELQMEQHLAGGTP 627 The following BLAST results are available for this feature:
BLAST of EMLSAG00000011124 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000011124 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 2
BLAST of EMLSAG00000011124 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 5
BLAST of EMLSAG00000011124 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000011124 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 1
BLAST of EMLSAG00000011124 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000011124 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s755:122472..146910+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000011124-693890 ID=EMLSAG00000011124-693890|Name=EMLSAG00000011124|organism=Lepeophtheirus salmonis|type=gene|length=24439bp|location=Sequence derived from alignment at LSalAtl2s755:122472..146910+ (Lepeophtheirus salmonis)back to top Add to Basket
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