EMLSAT00000000029, EMLSAT00000000029-695876 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000029
Unique NameEMLSAT00000000029-695876
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1006supercontigLSalAtl2s1006:130139..131393 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000029 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000029EMLSAG00000000029-682795Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000109EMLSAE00000000109-709037Lepeophtheirus salmonisexon
EMLSAE00000000110EMLSAE00000000110-709038Lepeophtheirus salmonisexon
EMLSAE00000000111EMLSAE00000000111-709039Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772886auto772886Lepeophtheirus salmonispolypeptide
EMLSAP00000000029EMLSAP00000000029Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000029

>EMLSAP00000000029 ID=EMLSAP00000000029|Name=EMLSAP00000000029|organism=Lepeophtheirus salmonis|type=polypeptide|length=122bp
MYSNIIKLSVALLLFVGVTSGLNCWKAGLHTRRSPAVFNQQTCDAASKSC
MIQRYMVNGMMHTSADCSTEDKDTCMEKEKGMVMETVCYCKTEYCNSASK
VRYLGSLALVLGFWVLKSSWIG
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mRNA from alignment at LSalAtl2s1006:130139..131393+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000029-695876 ID=EMLSAT00000000029-695876|Name=EMLSAT00000000029|organism=Lepeophtheirus salmonis|type=mRNA|length=1255bp|location=Sequence derived from alignment at LSalAtl2s1006:130139..131393+ (Lepeophtheirus salmonis)
AAGTCAAAATGTCCATAACAACGAGGAACGCTAAAACGAAACAACCATTT
AATGTCCAGGTCAAAAAATAATACAGAAAAAAAGTAACTCATTACTCCAT
CCTCGTTTCTGAAGTAGACAGCAACTATTTCAAATTATCTTTTCCCGCTT
TTCTTTGTCAGTGAAAGGATTTACATATCTTTCGAGCCATGTATTCAAAT
ATTATTAAATTATCTGTAGCTTTACTCTTGTGTAAGTCTACCTTAATTTA
TTATTAACCTAAATCATGTACCTTCTAATGTACCATTCGCAGTTGTCGGA
GTAACGTCTGGGCTCAATTGTTGGAAGGCTGGACTTCATACAAGAAGATC
TCCTGCAGTTTTTAATCAACAAACATGTGATGCTGCATCCAAGTCTTGTA
TGATTCAGCGTTACATGGTGAATGGAATGATGCGTGAGTATAATTAAAAT
CCCTCATTCTTAATTGATTTTAATCGAATCTTTGATACAGACACATCAGC
TGACTGTTCGACTGAGGATAAAGATACTTGCATGGAGAAGGAAAAGGGTA
TGGTTATGGAAACGGTATGTTATTGTAAAACGGAATATTGCAATTCGGCG
AGTAAAGTGAGATACCTTGGATCTCTAGCCCTTGTGCTTGGGTTTTGGGT
CCTCAAATCTTCATGGATAGGCTAAGACATATTACTCAAATGCATGGATA
TACAAGCTTGTAGCTTTTCCACCTTTTCTCTTACAATAATATATAATTGT
CTTTTTTGTATTTTGACATTTTTTTTCCCAATAAATTATGGATTTTGTAA
ATAAAATTTTTGAGTAATTTGGTCAATTCTATATATCCGCTTATAAATGA
TGATGGAGTACTACTCTAAGATATGGAATAAATTTGTACAAGACGAATAA
TTGAATTGTTAAATGTATTTAGTATAATTTATCTTATCATAGGAATTAAC
AAAATAAATTATAATGAATTAAAAATAAATATTTCTAAATTTGAAAAAAA
CCTAAAATTGATTCCTAATAATCTTATGCTTCATACTTTTCCTTGGCAGC
CTCAATGCTCTCCAAGGTTCGGGTGATCATGCTAACAATACGATCAGCAT
AAGGAGAGTTTAAATTGCGGGCAGATCTACCATCTAAAGGCGTCTCATTC
TCGATATAGGTAGTGAACAACTTTTGGAAAACGGCAGTTGAAGCAAACCA
TTCGCTAAAAGACGTGAACAGTGCTGACTTGGAAGCAAAGGCAAATCCCA
TAAAT
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