EMLSAT00000000031, EMLSAT00000000031-695878 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000031
Unique NameEMLSAT00000000031-695878
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1006supercontigLSalAtl2s1006:149120..150851 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000031 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000031EMLSAG00000000031-682797Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000114EMLSAE00000000114-709042Lepeophtheirus salmonisexon
EMLSAE00000000115EMLSAE00000000115-709043Lepeophtheirus salmonisexon
EMLSAE00000000116EMLSAE00000000116-709044Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773299auto773299Lepeophtheirus salmonispolypeptide
EMLSAP00000000031EMLSAP00000000031Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000031

>EMLSAP00000000031 ID=EMLSAP00000000031|Name=EMLSAP00000000031|organism=Lepeophtheirus salmonis|type=polypeptide|length=191bp
MPNTSKVRIKKPPLNTECPACLSKPNDPIRLPCNHIICLTCYKRNIELTS
LHCPLCKRRLSNWSRSINTNGGPKVDPVVKRWLMTQKPQTSKRKRVSKVS
STSSDSIKKDFEQEILHFRNKENTNHDEDNPDEIASMFSTDIEEQKQIEQ
RLLREREDARIALALNNSFRGVVDRSKNSPDAYSLRSKRMA
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mRNA from alignment at LSalAtl2s1006:149120..150851+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000031-695878 ID=EMLSAT00000000031-695878|Name=EMLSAT00000000031|organism=Lepeophtheirus salmonis|type=mRNA|length=1732bp|location=Sequence derived from alignment at LSalAtl2s1006:149120..150851+ (Lepeophtheirus salmonis)
TAATACAATGAATAACTAAGTCAAGGTTCCGTGTCTACAAAATAATAGTT
TCATATTATATAATTAAATATTCAATGACGTCACTTTAGTTTGATATTCC
GATCCAAAGATTACAAAAGGCCGAGTGAATTATGCCAAATACGTCGAAAG
TGAGGATAAAGAAGCCCCCATTAAATACAGAATGTCCTGCATGTCTCTCA
AAACCGAATGATCCTATCAGACTTCCATGCAATCACATAATTTGTCTGAC
ATGCTATAAACGAAACATTGAGGTGAGTCTATATATATTTAATTTAAAAC
ACATAAAATAAATATAGTCACATTAGCATATTAAATAATAATTTATGTAT
TAAAATGATTTTCTTCTTGTCCTTCGTAGTTAACTAGCCTTCATTGTCCC
TTGTGCAAACGTCGACTGAGTAATTGGAGTCGAAGTATAAATACAAATGG
AGGGCCAAAAGTCGATCCTGTAGTCAAGAGATGGCTTATGACACAAAAGC
CGCAAACTAGTAAAAGAAAAAGAGTATCTAAAGTCTCTTCTACGTCATCT
GATTCGATAAAGAAGGATTTTGAGCAAGAGATATTGCATTTTCGGAACAA
GGAGAATACGAATCATGATGAAGATAACCCAGATGAAATAGCCTCCATGT
TCTCCACAGATATTGAGGAACAAAAACAAATAGAACAGCGACTTTTGAGG
GAAAGGGAAGATGCGCGGATTGCTTTAGCTCTCAATAACTCTTTTCGTGG
AGTAGTGGATAGGTCCAAAAACTCTCCAGATGCATATTCTTTAAGGTCAA
AGAGAATGGCTTGATGAAATTAGATTTTTTTAAGATTNTTAACGGATGTG
ATATATTAATACTTTATTTTTTAGTATAGCTTATAAATTGAATGACATTG
GCTGAAATTCATATTGTTTATAAAATTTTCAATTATATTTATCGACAGAA
CAAATTATAACCGCATATATTTATCTATATCTCTATGAATTTATCATTCT
TTGAAACTTTTATTCAGTATAATGTATTACATACCTATGATATGTTTCTA
TAGGTAATGTATTAATTTGTTTCATATACAGGCTTATAACTTAAAGTCTC
TGACTATGTAGTTCCTTACTATCTATTTTATAGTAAAAATGATAACCTAC
ATATGTATTTCTGACGGTAAATGTTTTTACCGAATATGAGTCAAACAACC
AAAGTATTTAATTGGGGGCTCCCTTGAAGAAATAATAAATGGCTGGATTT
CAGATGCTACTACTACCCCAGCTCTATTTAACCACGACCAAAATTCCGTA
ATAGTGAAAAAAAAAAAGAAAATCATTGAGCATGAGACTGTCGATTAGAC
ATATTTTCCCTTTACTTGAGAATATCTCCAAGTTGCCTTGTAGAATGGAT
TTCAGATGACATAATTCAAGTCCTATAATCCTCCCAATCTTCCGGACCTC
TTAAAGGTGTGGCTTAGTTGTAGTGTCAATCCTAAGCTAAAAATATCTAA
GCCATATCAAAGAATACCTTTTAAGTGCTTATTTAGATATGGGCACCTAG
TTTATGCTTTGTATGCACATGATATGAATTGTTGCTTCAACATTGAAACG
TATTCAATCAGAAATTTGGAAAATCATTTATCTTGTAAGGAGTTACGAAT
TATAGAACTCAAACAACCTTAATCAATATTTTAAGACAGATTTAACCCAT
TTTTTGTATTTCTCATTTTGTTCTAATAGGGA
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