EMLSAT00000000038, EMLSAT00000000038-695885 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000038
Unique NameEMLSAT00000000038-695885
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1006supercontigLSalAtl2s1006:37164..39919 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000038 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000038EMLSAG00000000038-682804Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000154EMLSAE00000000154-709082Lepeophtheirus salmonisexon
EMLSAE00000000155EMLSAE00000000155-709083Lepeophtheirus salmonisexon
EMLSAE00000000156EMLSAE00000000156-709084Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770157auto770157Lepeophtheirus salmonispolypeptide
EMLSAP00000000038EMLSAP00000000038Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000038

>EMLSAP00000000038 ID=EMLSAP00000000038|Name=EMLSAP00000000038|organism=Lepeophtheirus salmonis|type=polypeptide|length=87bp
MWSIIKEYVGHGPSEMMLDIEIAAIQSVQQVLPDTYVSTCFFQFNKAVMD
QIAKKGAKTLTEQNNWGFHFVVDYQYPSHTILELDVC
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mRNA from alignment at LSalAtl2s1006:37164..39919-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000038-695885 ID=EMLSAT00000000038-695885|Name=EMLSAT00000000038|organism=Lepeophtheirus salmonis|type=mRNA|length=2756bp|location=Sequence derived from alignment at LSalAtl2s1006:37164..39919- (Lepeophtheirus salmonis)
ATGTGGTCCATTATCAAGGAGTATGTTGGGCATGGGCCATCAGAGATGAT
GTTGGACATTGAGATTGCTGCCATTCAGTCTGTGCAGCAAGTATTACCAG
ATACTTACGTATCAACCTGCTTCTTTCAATTCAATAAAGCAGTGATGGAT
CAGATAGCCAAGAAGGGAGCAAAAACACTTGTGGATCAAGATTTCGAATT
GAGTAGGATTGTTAAAGTTATAATGCCCATAACCTTTGTGCCTCTTCAAT
AAATTGTTCAAGTAAGGGAAGGAACAATTACCATTGGCTTCAGTTCTTGT
GTCAACTTGATCTTATACGGGTGTAGGCCAAGATCTTTTCGCAAAAATCG
CTACAACAATGTCAAAGAGATGCCCAACGATTGAGAACGGCGCGTAAGAG
ACAAATTTGGGTCATCTTGAATTGATACGCTTGCGGCAGCAATATTTTTT
ACACTTCGTGCATTTCTTTGTCTCACTGGCACAGGAACATTATGTAGCGT
GTATATGGACTCAAATTTTTTCACCAAACGTTGAATTGTTGATTTTGCAG
GTCGATTACGTTGACCATAAATTGGTGTTAACGCTCTTTAAGTTTGGATC
AAAGACTCACCACTTTTGTAATAAATTTTAATAATTTTCAAGCGTTGCTC
GAGTGTGTACTGCTCCATGATAAAACTATAATTATTTCTGAGCACAGCTG
TCAAAGAAAAAATAACAAATATGACGTCGTTTTTGAAGCCTATCAACATA
AAATGTGAGCGCTCCTNATAAAACTATAATTATTTCTGAGCACAGCTGTC
AAAGAAAAAATAACAAATATGACGTCGTTTTTTGAAGCCTATCAACATAA
AATGTGAGCGCTCCTATTGAAAACCCCTTTATATGTATGTATATATATAC
AAGACAATACCAGAAATAAGAGAATAAGAAGGAAGGAGACACGAATAAAT
TACAGTATATAAGGTCTGAATGTGTTCATATTCAATTTTCATACATATAA
ATATAGTAAACTGTGAACTAAGATATATGGGATTTGGTACAAATGTCGTG
GATGCATAGGTCATGGATACAAATGTCGCGTATACATAGGMCTGGATACA
AATGTGGCAGAATGAAAAAAGTTAATGTGACGAGAGAGAAACATATCACA
GTCTACTGAAACTACTGGATTGTGACCAAGTCTCATCGAAAAATTTTAAT
CAAAAGATTTTGGACTTTTATATGTAGACTTTTTAATATGAAAGATATTG
AAATTTACAAGAATAAAATAAAGGTCATATCTCATAAAAGAAAAAAAATA
ACTAGTCAACCCCCTTCCCCATGTCTTCCTCGGATGGGATTGTTCCTCCT
TGAATACACGTAGGCAGGGTTATAGAACCATAAAAATATATTAGGGCACT
TCCATTCAAGTGTCCATTTCCGAAACATCGAAAAAGGTCAAACATTTAAT
GTTTCAGGCTTATCTATATCCCAATAAGTTTTACTAAAATATGTATATTC
CATTTCCTAATTAAAATCAACGCCTTGTCAATGTTAAGCGTAGTTTCCAA
ATGTATCTCTGAAAGTAACATCCTTAACACTGGAATTGCCTATTAACTCT
AGCCATCATTTTAAAACTATATAAATAACTTATTATTTAGTTTTTATTGC
AATAATAACTGAAATTTTACATTTAGGACAATGGAAGTCAAAAAATGGTT
AAATCCATATTTGAAATCATTAATTCATTGCTCTGATAAAAATGAATTTG
TTGAATCAGGGAATTGAGTTAAATTAATTCCCCTAGTCCAAGGTCAATGT
ATTTCTATTAACCTTGTTTCAGTCTAAATGGGGAAAAGAGCCCTCCCCGG
TGACCGTTGATCACTCCAAAATCATGTCAGTTCATAACTATAAATAAGGC
TTTCATGTGACGTTTCAACATTGTTGATATATGCCATTTTGAGGGCCAAA
CAATCAAGTTTTATAGCAATGAAACTATATTCATATTAATGAAGATAGTG
TGAACTATTGTATCTCAAAATGAGACCAAAAAGTAAAAGGACAAAGGAAA
TTTTATCCGTCTATTGACTTGTTTTATTAAACATGTTTGATCCTAAAATG
TATTACGAATATGTTACTACATCGTTATACAATCTTATTTCCATATGGTA
GATATAAATCAAATATTATAATGAAAAGAATAACATATTTTCCCCAAATG
ATCATACTTTTTTTGTGCTTAATCGATCCAAAAAAAATTGTACAGTTTTA
AACATTTCATAAGGATTTTCAGTACATATTGACCACATTATATTCAAATA
TCACTGACATCATCTACTTTTCAATGCAGATATAAAGTCTTTTTTTATTC
TTAATCCCATTTGATGAAGTTTCATCAAAATCTATTCGATTTTTTTTTCA
TTTCATCTAGTAAAAATATCACCTTAAAGCCCCCCAGATAGCGTCTTTCT
CAATTATGGTGCAATTTATGACGTGAATGAAAACACCCCAAGGACAAGTA
GCGACATCTACATAAACAATTCAACCTGAGAAGAAACACTAACAGAATAA
ATTTACCAGGATAAATAAAAATATAATAATTATTATAAATAAATATTCCA
AGACTGAGCAAAATAATTGGGGATTTCACTTTGTCGTGGATTACCAGTAT
CCATCTCATACTAGTAATTACGGATTTAATCATTATGTGAATATTATTTA
GATCAATAATATACTTGACAATTATATTTACAGTTCTTGAATTGGACGTT
TGTTGA
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