EMLSAT00000000040, EMLSAT00000000040-695887 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000040
Unique NameEMLSAT00000000040-695887
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1006supercontigLSalAtl2s1006:57802..58891 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000040 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000040EMLSAG00000000040-682806Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000159EMLSAE00000000159-709087Lepeophtheirus salmonisexon
EMLSAE00000000160EMLSAE00000000160-709088Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770923auto770923Lepeophtheirus salmonispolypeptide
EMLSAP00000000040EMLSAP00000000040Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000040

>EMLSAP00000000040 ID=EMLSAP00000000040|Name=EMLSAP00000000040|organism=Lepeophtheirus salmonis|type=polypeptide|length=198bp
MDNTLIFYDNRNLLQPEDSKWNDGGWSNYPPYIPEDYKSHLAPQTPQHLS
PSQHHSPNDHSSSYDDRQAPNSSLSFENFIIGGNNLPNARKSRGGRKKST
RPPSPEXLRRRRTXANARERKRMNGLNHAFERLRDVIPDLGSDNKLSKFE
TLQMAQTYIGALSGLLKQADDNDNDLLTSSSSNNSGMGVVSHSSHIIQ
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mRNA from alignment at LSalAtl2s1006:57802..58891-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000040-695887 ID=EMLSAT00000000040-695887|Name=EMLSAT00000000040|organism=Lepeophtheirus salmonis|type=mRNA|length=1090bp|location=Sequence derived from alignment at LSalAtl2s1006:57802..58891- (Lepeophtheirus salmonis)
ATGGGTAGTTTTGTGTGTGTGTGTGTGTGCGTTTGAGGGATGCCAATAAA
TTCACACCTTACACAGAAACAGTTTCAGTTATATATATTATATTAGTATG
CTTCTTTAGAGGCTTMCAATTAAATTGAACACTCACTTGTATGTTTGTTT
TATAAAGTGTCTTTCCTTTCTCGTAGATGTCGGTCTCATGCAAATCTGTA
AGAAGAGGCATGCATKCCTGTGGTTKAAGCCGTCATTTTTATTCGTAAGA
AAAATGAAATAATTATAAATGGTCATCATAAATTATTATATGGCTCSCCT
GCCCRGAATTACACGGCGCAAGTTCTCAACGTCATCCATTCTACTCGAGT
TTTTAACCAGTCATGAATTGAAAATGGAGCCCTTCAGAACCAATGACGTT
ACTCCATCCCTCTTTCCATCTGCKCCCCTGTCCTCCACAGGATCCCANCC
CTCTCATCATRCCCATCKCCACCACAACCACGTCCATCCTATTCCAGACA
ACACACTCATCTTCTACGACAACCGAAATCTTCTCCAGCCCGAAGATTCC
AAATGGAACGACGGTGGCTGGAGCAACTATCCACCCTACATCCCTGAAGA
CTACAAAAGCCACCTAGCCCCACAAACACCCCAACACCTATCCCCCTCTC
AACATCACAGTCCCAATGATCATTCATCATCCTATGATGATAGACAAGCG
CCCAACTCATCTCTCAGTTTTGAAAACTTTATCATTGGTGGAAATAATTT
ACCCAATGCTCGAAAGAGTCGCGGAGGAAGAAAGAAATCCACTCGGCCCC
CATCGCCAGAGGMCCTTCGTCGTCGTCGAACASCTGCCAATGCACGTGAG
CGAAAGAGGATGAATGGGCTAAATCATGCATTTGAGCGTTTGAGGGACGT
GATTCCGGATCTTGGCTCTGATAACAAATTATCGAAATTTGAAACGCTTC
AAATGGCTCAGACGTATATTGGAGCACTCTCTGGGCTTTTGAAACAGGCG
GATGATAATGACAATGACTTACTCACTTCCTCTTCTTCTAATAACTCTGG
TATGGGTGTTGTAAGCCACTCATCTCACATCATTCAATAG
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