EMLSAT00000000042, EMLSAT00000000042-695889 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000042
Unique NameEMLSAT00000000042-695889
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1007supercontigLSalAtl2s1007:12308..13122 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000042 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000042EMLSAG00000000042-682808Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000163EMLSAE00000000163-709091Lepeophtheirus salmonisexon
EMLSAE00000000164EMLSAE00000000164-709092Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769020auto769020Lepeophtheirus salmonispolypeptide
EMLSAP00000000042EMLSAP00000000042Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000042

>EMLSAP00000000042 ID=EMLSAP00000000042|Name=EMLSAP00000000042|organism=Lepeophtheirus salmonis|type=polypeptide|length=144bp
MPEDKNMKGNMKYITKCASPSFYTKSKALKIHSEGIHKKKRKFKCNYCSS
SFSNSGTLKKHFDAVHEKIKQYQCSNCSKSFSYSEDLKMHVEAVYEKITK
FQCSDCSSSFTQSGHLKTHIEAVHENIKKSNIMIVLVIFYSLED
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mRNA from alignment at LSalAtl2s1007:12308..13122-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000042-695889 ID=EMLSAT00000000042-695889|Name=EMLSAT00000000042|organism=Lepeophtheirus salmonis|type=mRNA|length=815bp|location=Sequence derived from alignment at LSalAtl2s1007:12308..13122- (Lepeophtheirus salmonis)
ATGCCAGAAGATAAGAACATGAAAGGAAATATGAAATACATAACAAAATG
TGCGAGTATTAGTTTGATTTATCGTATTTATTTTCAAAAAGGATACTTAT
CACAACAAAAGGTTGCGTGATTTTAGTATGTGATCCTCCAGAGAGTGTTA
TAAATATGTCCTCTAAAATAAACATCAAATAAAAAATGACGTCACTTATT
TAGTAGGAATAAGAAGGAATTTCAATTTTCGTTTTAGAAAAAGTGCCATA
ACTAAAGTGCTTATCCAACAAATAAATGTTGTTTTGGTGAGAAAAAAATT
ATACACTCAATATAGATTGCCAGAGTCTATTTCAAATTGAATATTGATCT
AGTTTTTTTTTTTTTTTATTTGTAACCAACTTACCTCGTTTCACGTTATT
AGAACAGTCTTATTAAATATTATAAATTCAAATAGGTCCTAGTTTTTATA
CAAAGTCGAAAGCCTTGAAGATACATAGTGAAGGGATTCATAAGAAGAAG
AGAAAATTCAAATGTAATTACTGCTCTAGTTCTTTTTCAAACTCTGGAAC
TTTGAAGAAGCATTTTGATGCTGTTCATGAGAAGATAAAACAATACCAAT
GTAGTAACTGCTCTAAATCTTTTTCATACTCCGAAGATTTAAAGATGCAT
GTTGAAGCTGTTTATGAGAAGATTACAAAATTCCAATGTAGTGATTGCTC
TAGTTCTTTTACACAATCCGGACACTTGAAGACACATATTGAAGCTGTTC
ATGAGAATATAAAAAAATCCAATATAATGATAGTTCTAGTAATTTTTTAC
AGTCTGGAAGATTGA
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