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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s100 | supercontig | LSalAtl2s100:133741..138674 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000054 >EMLSAP00000000054 ID=EMLSAP00000000054|Name=EMLSAP00000000054|organism=Lepeophtheirus salmonis|type=polypeptide|length=521bp
MAKCKSKTKFLPAAFAWXLLISATGLFFYYPCIQWYLFVKKLWMVVLYQG
IVTVFVLMNFSLATFMDPGVIPRASIFEDRDEEFRAPLYRNIEINGITVR
MKWCVTCNFYRPPRCSHCSVCNNCIEIFXHHCPWVNNCIGRRNYRYFFMF
LICLSIHITSIFILCLIXVLYNXEXLSDGAVIVSIVIMTIITLLFIPIFG
LTGFHMVLVSRGRTTNEQVTGKFRSGXNPFSKSCCFNCCNTLCGPHYPSL
KHPSKYVGKKPRKYQVPVNFSGTVVESGLKDQVRTYRDSYPPQIQNTSST
IRSTYNRMTPVGRDDTETQSDLDEPMAXQSIDSEAALTHNSSKNNFFASP
EVETPNDSSRLKITRGSIKNRDSPNSYQGKFNPQYAKGSPHPSQTRGSSV
SAAKRSQTPDPLLGESLEMRSMENPQSSSTVTGSSVLTSPQISQKVTRMG
GVPTPFAMNSSQAPRFNHAVASGGGRPEFISLQQQQQQQRSMDQQPLSRS
YNQSYAAVPSTTVGGAMSVAQ back to topmRNA from alignment at LSalAtl2s100:133741..138674- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000054-695901 ID=EMLSAT00000000054-695901|Name=EMLSAT00000000054|organism=Lepeophtheirus salmonis|type=mRNA|length=4934bp|location=Sequence derived from alignment at LSalAtl2s100:133741..138674- (Lepeophtheirus salmonis)
ATGGCCAAGTGCAAGAGTAAGACGAAATTTCTTCCGGCGGCCTTTGCGTG
GKCCCTTCTCATCTCAGCAACTGGACTTTTTTTCTATTATCCGTAAGAAT
TGGAATTTTTGAAAAGACATAAAGTGAGATTGGATTTGATTCCTTGTACT
TAATGCATTCTTAGGTGTATCCAATGGTACCTTTTCGTGAAGAAGCTTTG
GATGGTGGTTCTCTATCAGGGGATCGTGACCGTGTTTGTCCTCATGAACT
TTTCCTTAGCAACTTTTATGGACCCGGGCGTGATTCCCAGAGCTAGTATA
TTTGAGGACCGAGATGAGGAATTCCGCGCTCCCCTCTATCGGAATATCGA
GATCAATGGCATTACAGTACGCATGAAATGGTGTGTCACTTGTAACTTTT
ATCGTCCTCCTCGATGCTCCCATTGCTCTGTGTGTAATAACTGTATTGAA
ATCTTTGKCCACCACTGTCCTTGGGTCAATAATTGTATTGGTAGAAGAAA
TTATCGCTATTTCTTCATGTTCCTTATCTGTCTCTCTATTCACATCACTT
CCATATTCATTTTATGTCTCATTCKCGTCCTCTACAACYGGGAGCWTCTC
TCTGATGGAGCCGTTATTGTGTCCATCGTCATTATGACAATTATCACTTT
ACTTTTTATACCCATATTTGGACTCACAGGCTTTCATATGGTCCTCGTTT
CTCGGGGAAGAACTACTAATGAACAAGTCACTGGGAAGTTTAGGAGTGGA
TAKAATCCATTCTCCAAAAGCTGTTGCTTTAACTGTTGCAATACCTTATG
TGGGCCCCACTATCCTAGGTCTGTACATCTTCAATCATTTATTTATTCAT
TGACACTCCCCCTCTTGACATTGATGTTAATGATACAATAATAACCATTT
TCTTTATTTTTATAGCTTAAAACATCCCTCAAAATATGTCGGTAAAAAAC
CAAGAAAGTATCAAGTTCCAGTGAACTTTAGCGGTACAGTTGTAGAGAGC
GGCTTAAAAGATCAGGTGCGAACTTATAGAGATTCTTATCCACCCCAAAT
ACAAAATACTTCTTCTACAATACGATCCACTTATAATAGGGTAAGAAGGT
CTTCCACATTTCTCTGTCTCTCTATCTCTTAAACAAAAACAAACAAACAT
GAAACTATGTACTACTTATCTGAACTTTTAACCTATAAACAAAGATCATT
TCATTAAATCTTAAACCCAATAAATACTTTTCTAATGTTGTTTTACTTCC
GGAAAAGAGACGAAAATCAAACTCTTAATCATTATTGATATTATATTATA
ATTGTATTCAATTGTTTTAAAACAATCTCCTTACATTTTTTGAAAATCTA
CTCTTTTAAGTTAAGGGATTGAAAATTCGTCTTTTCTCTAAATTTAATCT
TTCTCCCTAACACTGTGCTATTATTAACTAATTTCAATTTCTTTAATTGT
GCTTCTTATCACGTGTCGGTGGAATATGAATTCATCAGGTTTTCCTCTAT
AAATATAATATTTTCCATTGTTTCTTATGGCGTAGTTCTGTATTAATATG
TGTATAAATATTATTTGCTTTATGCACATTCATAGATTTTATTTTTTTAG
AAAAATCAGAAATATTTTCTACATATTAAAAAACCAACGTACTAGTTTTT
TTGTTTTTTTTTTCTAATTGTATATTATTGTTACTACTTAAAACCCATTT
CCATCATATTTTCACATTCATTTTTTCCTTCTAAATTACTTTTTATGGGT
TTAGTACTCATCATGTTTCAAGTGACTAATGAATAATTACGTATATCCAT
TATATTGATTCAAAAGTAAATCAATAATCAATCCGTGCTTTTGAAACATG
ATGAGTAACCTCCTTTTTATGGTTGGTTATCATTATAAGTTTATTTTTTT
GGATGAAACCCTTATTAAAATGGTCGGCAACCCGCGAGAGGTTGTCATCT
GGCCCTTCAACATTTTAATATAAAATCATTTGTATATTACCGTATCCTCT
CATTTCAGTGACTTTTTGTAAATAATTAGAATTATAAAATAAGATCAGGA
ATTTTTATATAAGATAGAACCAAACCTTTCATATATGTACATTGGATAAA
AATCTAGGGCCCAAACCCTGCGTCTCTCAAGATCGCAATTTTAAATTCAA
GGATATGTATTTATTCTTTGCGCAATCTCATTTTTTCGTCCTCATCTGTA
GCTAGAGTCCATTCCCAATGGATCTATAAAACATTTATTTTATATCCCGA
TAGTGTAATATATGTGCATTATATTGTACATTTTTAAAAGACACATATGA
TACTAAAAAACCTATTATTTGGGATCTAGGTTTAATCAAATGTCAGAAAT
ATAATTTTAAAAAAACAAAAAAAAAACTCGTCATAATGAATATGCACCTT
AAAATTACTTGTATTTCATTTAGTCTATGTATATCAAACTTTCTGATTTG
TGTCTCTTGTTTGGACACATTTAGCCAAAAAGATAAGATAGCATTTTTAC
TTTTTAGAATTAAGATGCTAGATGAAAATATGTTTGCTCCATACATCCCT
CATGGGACGGGCCACATAGTTTGCAAAGCCTCACATTAATCCTAAAAATA
ATTGTTGTTGTTTTTTTGAAAAGTTCAACAAATTGTATTTGTTTTATACT
ATTTGATAAAATGGCCCACCATAGTACAGACTGTGCATGGCTAATTAGAA
CCTCTTACTCCCTAAGATTGTCGTTCCCTGGCTCATTGTATTAATTATTA
TCATCAATGCATGCAATTTTTTTATAACCTCAAGACGACTTTTTAAGTTT
TCTATATTCATTGTACATATTTTAGGTTAACTTGTCTGAAATGATGTGTT
GACTAATTTGCAGTCCTTTTGTTATTCAATCAACAACAAACAAAAAGAAA
ACAAGTAAATTTTCCTTATATAATAATGATGTAATTAACGAATTTTTTTT
GGCAAATTTATGTAATTCTAATATTAAGTAGTAGTATTATTATTTTTTTT
ACGATTATGACCATCTTAAAAAAAAACCATCGATAATTATATTTCATGTC
ACATATAGAAGAATTTTTTTTCATATCTTTTATAAATATGAGCGCACACC
TCTTACACATATTATTACCTACTACTATCTTAGATAAACTTACTTAATTT
TTAGACATCTTTTCTTTTTCATTTTTTCCATCCAACAAATCTATCATCCT
TTTCTTTTTTCCGAAATTATTCTTTTTTAAAGATGACACCGGTTGGAAGG
GATGACACTGAGACTCAATCAGATTTGGATGAACCTATGGCTAYTCAATC
CATTGATTCAGAAGCTGCTTTGACACATAATTCTTCGAAAAATAACTTTT
TTGCCTCTCCAGAAGTTGAGACTCCTAATGATTCGTCTAGACTCAAAATA
ACAAGGGGGAGCATCAAAGTATGTTTCATTATTACTTATTTTCTCTTTAG
TTGCATTTTCAGGGTATTTTCTATTCATTTATTGTTCATAAATCTTTAAT
TAAAATCATATTCTTAATAATCATAACATTAATAATACATAATTAAATTA
ACATTAATAAATAAATTATAATCATTTCTTTAGATAATATATAATACTTA
CATATTATATTAATTAAATTTATTTGTAAAAGACATTGCATTACATAAAT
ACTATGATTAATGATTAACGCTCTACTAAATTCATATTTCCAGAATCGAG
ATTCACCTAATAGTTATCAAGGGAAGTTTAATCCTCAGTATGCTAAAGGA
TCTCCTCATCCCTCACAAACCCGGGGTAGTAGTGTAAGTGCTGCAAAACG
ATCTCAAACTCCTGATCCACTTCTAGGTGAGTCTCTGGAAATGAGATCCA
TGGAAAATCCACAATCATCATCTACAGTAACAGGGTCTTCAGTGTTGACG
AGTCCACAGATTTCTCAGAAAGTGACTCGAATGGGAGGAGTTCCCACACC
CTTTGCAATGAATTCATCTCAGGCCCCAAGGTTGGTTTTTTGATTGATTT
TTTATGCTAATACGTATGTTATGTTATCTTTTTATTATATTTTTGTAAAT
TATATTAGATTCAATCACGCTGTCGCTTCTGGAGGAGGAAGACCCGAGTT
TATCTCCTTGCAGCAGCAGCAACAACAACAAAGATCCATGGATCAACAAC
CTCTTTCCCGCAGTTATAATCAGTCATATGCTGCTGTKCCCTCGACAACT
GTAGGTGGAGCAATGTCGGTGGCACAATARCCAGCCACATCCCCTGGACG
AAGGTACATACTTGTCTCTGTATATATTGTCTTATCATAAATATTAAAAT
TGTAATGCAGGTACCTATCTGATGGCGAATTACTCGGAGATTCAGCTCAT
CACCCACACCTACACCATGAGTCAATAAATTCTCCCCAAAGGAGCTATTA
CATTTGGAAGGACACTTCTCCCTATCATCAGTATCAGGGAGCCTCACCTT
CCCCTGCTGGACATCCAATGGCTGGAATGCAGCAAGATTTGTCTAGTCCC
ACTCGTCATGCTTCCTACGCGTCACAAGTCGGTTATTTCTTACAACAGAC
ACAACCTGTAAGACATCATATATCATGGGCCATCATGACCCAGTTAAATA
TCACATTCATATTTTTAGTAATTGTTGTATTTCTTTGCAGACATTACAGT
CTGGTGGTCCTAGAACTACACCTTCGGGCTATCCCGGAGGTCCCATTGTA
CCCAGTGGACACTTGTCTCCTCCACCGACTAGCAAATCTTCCTCTAGTCC
TTATACCTCTGGACAACAACCTTTGTCCTTTACGCGCGCATTAGAGGTTT
CTGACTCATTAGAAATGAGGCAACCCTCATCTCAACAGCCATCCCAATCC
AGCGGAAATCCTTCCAAAGGCGTTTCTGCTGACAATGCTCATAGAGACTC
TGTCTACGATATTAATTACGAAATATCCGTATGA back to top
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