EMLSAT00000000107, EMLSAT00000000107-695954 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000107
Unique NameEMLSAT00000000107-695954
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s101supercontigLSalAtl2s101:154235..156996 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000107 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000107EMLSAG00000000107-682873Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000453EMLSAE00000000453-709381Lepeophtheirus salmonisexon
EMLSAE00000000454EMLSAE00000000454-709382Lepeophtheirus salmonisexon
EMLSAE00000000455EMLSAE00000000455-709383Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773451auto773451Lepeophtheirus salmonispolypeptide
EMLSAP00000000107EMLSAP00000000107Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000107

>EMLSAP00000000107 ID=EMLSAP00000000107|Name=EMLSAP00000000107|organism=Lepeophtheirus salmonis|type=polypeptide|length=751bp
MRKREGKRRREKKRKENQGSEMESSQPPNRKKEVFQWSTPADEFADDVGS
DVEEEVVAXVDVEEEGEGEEEEEERLALDATCGSDSDDDPLRHEMPHEED
VEEEPMDEESFNVDQETGGIIINLGVEEADKFSALENLGKRRGRKVGEIL
KPKHKYPCPKCNKEWNWPWELRRHIVTHYREKERQETSAYKCETCGKGFQ
WKRDLAQHRRLHTGEKLLICSVCQKKFTTRQALLHHVVVHTGEKPFQCAF
CGNKFTQPANLRTHMKKKHPEMNCKGNKCPHCGEAFTSIVAVHQHVLDDH
QNLVAEARENLELDRIKKEAEKIRKEKEKLEKRKIRIKEKVMNIAHGDRP
YKRVNEWEMEYEFQLGEGLVRGVDWDRTPSNGELSCDQCDRKFGWRYEVM
FHGLCHLVDEEGNAKNKVCPECDTAFKVPIGLKHHLVLHTGETPFLCLHC
WKSFASHIDLKLHIRKEHLLHLLPTTGSSKSKKGGSDNASDEKHGIKKED
KKSAVRLAKANSSLDSSVTVVVENEEGGNNVSVSGTGDSQTQETETIVIE
GEQISNDQDMIVIVQSGEFEESQGLIVVDPSQIRQINGSRMEVEHSSNAE
SERKESSNPTSLNQFVKLQVSEGCDETTVVVSQEETAQDESDESTYVVVD
SNNRIHIQSQKDRGAPPTEEQILSSTEDSKIVLEREEMMSQESNEKNTFS
SEAGGDAEPSVATDDSDNVPSSEQHSNSDSDVHTETIIEDTKVVVLDKDN
A
back to top

mRNA from alignment at LSalAtl2s101:154235..156996-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000107-695954 ID=EMLSAT00000000107-695954|Name=EMLSAT00000000107|organism=Lepeophtheirus salmonis|type=mRNA|length=2762bp|location=Sequence derived from alignment at LSalAtl2s101:154235..156996- (Lepeophtheirus salmonis)
ATGAGAAAAAGAGAGGGAAAAAGACGAAGAGAAAAGAAGAGGAAGGAGGT
AAGATCGCATTGTAATAGCAGTTGTAATACAAATACGTAGTACGAATAAA
ATAATAAGAAATAGTATTCTGAATATTAAAGAGCGTGTGTGCGTGTGTGC
ACTGTACGAGGTAGTTGGCGTTGTTGAATTAGGAGGAGATCAAAGCTAGA
ATGAATAAATAAAAACTATGCTAAGATAAAGAAGAGAGAGAGAGAGAGAG
AGCCTGGACTTAAAGCGAGCTAGGAAGAAGGAAAAGAAAAGAGGTTGAGA
GGTAGTGAGAATTGGGTGAGAATAGAAGGGCGCAGGGCAGTTAGGGAAGG
AATTGGAAACTACAAAGCAGCCTAGCAGTTTTCTCTTTATTTCTTCTGCT
GGTGGAGAAGTGGCTGYCTTACTAGTTACTGGTGGCGAGGMGTTGTAGAG
ATTGAGTTGAATTGTTAGGTTTGGGGAGATAGAATCAAGGTTCCGAAATG
GAGTCATCCCAACCCCCCAATCGTAAGAAAGAAGTATTTCAATGGAGCAC
TCCTGCGGATGAATTCGCGGACGATGTTGGTTCTGATGTGGAGGAAGAAG
TGGTGGCGGYAGTGGATGTGGAGGAAGAAGGGGAGGGGGAGGAGGAGGAA
GAGGAGAGATTGGCCTTGGATGCAACGTGCGGGAGTGATAGCGACGATGA
CCCCTTGAGGCATGAGATGCCTCACGAAGAGGACGTGGAAGAGGAGCCCA
TGGATGAGGAGAGCTTCAACGTGGATCAAGAGACGGGAGGGATCATCATT
AACCTAGGAGTTGAAGAGGCGGATAAGTTCTCCGCCCTCGAAAATTTGGG
TAAGAGGCGTGGACGGAAAGTTGGGGAAATCCTTAAGCCCAAACACAAGT
ATCCTTGCCCCAAATGTAACAAGGAATGGAATTGGCCTTGGGAACTTCGT
CGCCATATTGTGACGCACTACCGTGAAAAAGAGCGCCAAGAAACTTCAGC
CTACAAATGCGAGACTTGTGGTAAAGGCTTTCAATGGAAAAGGGATCTGG
CACAGCACAGACGACTTCACACTGGAGAAAAACTTCTCATTTGCTCTGTA
TGCCAAAAGAAGTTCACTACGCGCCAAGCTTTGCTCCACCACGTTGTGGT
TCACACGGGAGAAAAACCCTTTCAGTGTGCTTTCTGTGGAAACAAGTAAT
GTTCACCTCCTAGAAATCCTATCCCTACCTTACTTTTCAACTCATTCTCC
TTTTCATTCACTTTTAGATTTACTCAGCCGGCTAATCTCCGTACACACAT
GAAAAAGAAGCATCCGGAAATGAATTGCAAGGGCAACAAGTGTCCTCATT
GTGGAGAAGCCTTCACAAGTATTGTTGCAGTGCATCAGCATGTTCTCGAT
GATCACCAGAATCTCGTCGCTGAGGCTAGAGAAAACCTTGAGCTCGACAG
AATCAAGAAGGAGGCTGAAAAAATACGCAAGGAGAAGGAGAAATTGGAGA
AAAGAAAAATAAGGATAAAGGAAAAAGTAATGAATATAGCCCACGGAGAT
CGTCCTTATAAAAGGGTCAATGAATGGGAAATGGAATATGAGTTTCAATT
GGGAGAGGGTCTGGTTCGTGGAGTTGATTGGGATCGTACACCGTCCAATG
GGGAATTAAGTTGTGACCAATGTGACCGTAAGTTTGGATGGCGCTATGAG
GTTATGTTCCATGGTCTTTGTCATCTTGTCGATGAGGAAGGCAACGCCAA
AAATAAAGTATGTCCGGAATGTGATACTGCTTTTAAAGTACCCATTGGAC
TTAAACATCATCTAGTGCTGCACACTGGAGAAACCCCTTTTCTATGTCTT
CATTGCTGGAAGTCCTTTGCCTCTCATATTGACCTCAAACTCCATATTCG
TAAAGAACATCTTTTGCATTTATTACCAACTACAGGTTCTTCCAAATCTA
AGAAGGGAGGAAGTGATAACGCCTCTGACGAAAAACATGGTATCAAAAAG
GAGGACAAAAAGAGCGCCGTCCGACTAGCTAAAGCTAACTCTTCCTTGGA
TAGTAGCGTGACTGTTGTCGTTGAAAATGAGGAGGGAGGAAACAACGTTT
CTGTATCTGGTACTGGCGATTCCCAAACTCAAGAGACTGAAACTATTGTG
ATTGAAGGAGAGCAAATCTCTAATGATCAGGACATGATAGTTATTGTACA
ATCTGGGGAATTTGAAGAATCCCAGGGTTTAATTGTTGTTGACCCTTCAC
AAATTCGTCAAATTAATGGATCTCGAATGGAGGTAGAGCACTCGAGCAAT
GCTGAAAGTGAGCGAAAAGAATCATCAAACCCTACCTCTCTTAATCAATT
TGTCAAGTTGCAAGTGAGTGAGGGATGTGATGAAACAACAGTAGTCGTTT
CTCAAGAAGAGACTGCTCAAGATGAGAGTGACGAAAGTACATATGTCGTT
GTGGATTCCAATAATCGAATACACATTCAGTCTCAAAAGGATAGAGGAGC
GCCCCCAACAGAGGAGCAAATTCTCTCCTCGACTGAGGATTCAAAAATTG
TGCTAGAAAGGGAAGAGATGATGTCTCAAGAGTCGAATGAGAAAAATACC
TTCTCCAGTGAGGCAGGTGGAGATGCAGAGCCGTCAGTGGCAACAGATGA
TTCGGACAACGTTCCTTCTTCTGAACAGCATTCCAATAGCGACTCAGATG
TTCACACGGAGACTATAATTGAAGACACAAAAGTTGTTGTGCTTGATAAG
GACAATGCATGA
back to top
Add to Basket