EMLSAT00000000160, EMLSAT00000000160-696007 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000160
Unique NameEMLSAT00000000160-696007
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1025supercontigLSalAtl2s1025:101799..103083 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000160 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000160EMLSAG00000000160-682926Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000799EMLSAE00000000799-709727Lepeophtheirus salmonisexon
EMLSAE00000000800EMLSAE00000000800-709728Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772179auto772179Lepeophtheirus salmonispolypeptide
EMLSAP00000000160EMLSAP00000000160Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000160

>EMLSAP00000000160 ID=EMLSAP00000000160|Name=EMLSAP00000000160|organism=Lepeophtheirus salmonis|type=polypeptide|length=410bp
MPHSNNETSGPEKERKLFLGGLNYSTTEDGLKKYFEKYGELVDIVVMXFP
DTRRSRGFGFVTFAQVDQAXACFEERPHTIDSTTIETKRATPKEEMESAD
EGSQPEVMRKLFIGGLDYSTDDETLKAFFEQFGELVDCVVMKFRDTKRSR
GFGFXXYAHXDXVDXXXAARPHTIDGAKVETKRATPREDVAKPESSSSVK
KIFIGGLKDGIEDEDLKDYFSKKRGFGFVEFDDYDPVDKIVLIGKHYLND
WRIDVKKAISRSDLNGGGGGGGGRREPDRGPRGRGPGGSRGQPAPWGNSG
GNGFSGGYDNYGNGGGGNGGGGGWGNSGGGQPSPWASSNNNGGGWDDHHG
GWGGGNNGWGDNFGNRGNSGGPMRNSIVGSGRNAPYSMGRGGFGGGGGGG
YNRXSGGGRW
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mRNA from alignment at LSalAtl2s1025:101799..103083+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000160-696007 ID=EMLSAT00000000160-696007|Name=EMLSAT00000000160|organism=Lepeophtheirus salmonis|type=mRNA|length=1285bp|location=Sequence derived from alignment at LSalAtl2s1025:101799..103083+ (Lepeophtheirus salmonis)
ATGCCACATTCCAACAACGAAACGTCGGGCCCCGAGAAGGAGAGGAAATT
ATTCTTGGGGGGTCTGAATTACAGTACAACTGAGGATGGCCTTAAAAAGT
ATTTTGAAAAGTATGGAGAGTTAGTGGATATAGTCGTGATGYGCTTTCCT
GATACGCGCCGGTCCAGAGGCTTTGGCTTTGTTACGTTCGCTCAAGTGGA
TCAGGCGGRTGCCTGCTTTGAAGAGAGGCCTCACACCATTGACAGCACCA
CCATTGAAACTAAAAGAGCGACTCCCAAAGAAGAAATGGAATCCGCCGAT
GAGGGAAGTCAGCCCGAAGTGATGAGAAAACTCTTCATTGGAGGCCTCGA
CTACTCCACTGATGATGAGACGCTCAAAGCATTCTTTGAACAATTTGGGG
AATTGGTGGACTGTGTTGTCATGAAGTTTAGAGATACAAAACGCTCTAGA
GGCTTTGGATTCKTTMCCTATGCACATTMAGATAKGGTAGATMCCTRWMA
AGCCGCTAGACCTCACACCATTGATGGTGCCAAAGTAGAAACCAAGAGAG
CAACTCCTCGAGAAGACGTCGCCAAACCTGAATCCTCGTCCTCTGTCAAG
AAAATATTCATTGGGGGCTTAAAAGATGGAATTGAAGATGAAGACTTGAA
GGACTATTTCTCAAAGTTTGGAAACGTCGTCAATGTNGGAACAAATGAGA
GAGAAGCCAACGAATAGAAAGAGAGGATTTGGATTTGTTGAGTTCGATGA
CTATGATCCTGTGGATAAAATTGTACTTATTGGAAAGCATTATCTCAACG
ATTGGCGTATTGATGTGAAGAAAGCAATCTCGCGTTCTGACTTGAACGGT
GGTGGCGGCGGKGGKGGKGGCCGTAGAGAACCAGATAGAGGTCCAAGAGG
TCGTGGACCTGGTGGTTCAAGAGGACAGCCCGCTCCATGGGGCAATTCTG
GAGGAAATGGCTTTTCAGGGGGATATGACAACTATGGAAATGGGGGAGGA
GGCAACGGCGGKGGCGGCGGRTGGGGKAATAGTGGKGGAGGACAGCCTAG
TCCTTGGGCTTCATCCAATAACAATGGTGGAGGATGGGATGACCATCATG
GAGGATGGGGCGGKGGAAATAATGGTTGGGGRGATAATTTTGGTAATAGA
GGAAACTCAGGGGGGCCAATGAGGAATAGCATCGTTGGAAGTGGTCGAAA
TGCTCCTTATTCTATGGGTCGTGGAGGATTTGGAGGAGGAGGAGGAGGAG
GKTACAATCGCAGKAGTGGAGGTGGTCGTTGGTAG
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