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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1025 | supercontig | LSalAtl2s1025:69986..76505 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000175 >EMLSAP00000000175 ID=EMLSAP00000000175|Name=EMLSAP00000000175|organism=Lepeophtheirus salmonis|type=polypeptide|length=1676bp
MIRARYKDVSINAKLFRQSHITKGSELTSQDLENWLGNAFNDNLLLFLHK
IRAVHEFLPELIQYLDKKMIHNLCDDVWSNEESDEELWAASLKTGITSIN
LDIFLKACSFKSLELALVAXAIRSQCTSSSQEEFPEPGTLAEAALISALS
HRNQWNNDDLGMQTLIFDRIIMALKSSSFLFHNYDSLGVFLVHSNSLEFA
DKTLHMIEGMSSFSNVRGVQEKTLKTYEHAWNVLSKKDPEYSRRLNESRT
YLTFKKSWKSKIKYGLLYVIHSRIRSIEDDCSESIKELSIGLIESLASNF
LASLGSNLYSVLLKSMKAETWINEFLPLLINIFPNPDSVSIEYVKNLWIP
SIVKILPLECANFLYSRLSQGESSPASISVQLCILKTQRMNGFLSDLNEN
IFDRLNEVKDHFDSHVRISCFSVICQKLKKGSPPSKKEFELFLSIIRDNL
NIDSSSFRQKLVSHFTVMLLRVRDFCISSLKKNSLEEIIKYFMEGINNLE
KYLVKHVYPSGNYQITITSLCLLEVLSQVFYESKGDIIKTSGVKSSEPLL
IYVQKEYGFLNFHYQEKNRQILLRSLLHYMEDVRKIAKKILFRFPEPSNT
ERGLILKNAERLSNSPKISECESASDYYEILNAWRGDTANNKFFDAFLIK
YNSLMDKFSCNGDYNVLQVVKEESSMHGILLALRKYSFIYEQEKITNLCL
VRLVEALERSVQTMLRIMNPDNEEENPSFEKMGVSIQSYLEDEDEIPIEI
SGDHQLLLSCAWLNIKECALLSGFIVKSCHLVTHPEESEIFTLSQDLVDR
CCKIVMTILRCCRHKGIMEGTNLAVEDIATRLLSEKSPWKEIPMNILEKV
LKEIVFQSSSTTRRSAGIPMLLQGLVSSEAKLRRDSNLLETSIKKLLDIA
SSPTLTYESMDSSASHALHILKSLVNNSSISSGISPFLEKLFICCVNNFS
SDSWGIRNASLQLFGALQPRLIGQKKLRDDDSEHNMVFAKDFFDQYPDLS
EYILLQLQKPTQLSREALFDNQVLMPLLTLLSKLNNGEKDPYVLSKPYKK
AFIPHLFSPVINIRKLVTRCMKRFSTDLENDFLELYILALQSNSANFLHS
MSYLLEYLMELHPSSLIGKVFIQTFHLYPCFEIRSLLSKYIVKDFDIPWE
EVSRIFIIYNSFTHYLIELSDINCLKKYGFLELDFSSEKYEESILEFMGA
IEKNRTLIVTDSSLQKICIEYFKSDVKELRRMSSRVFSTLLPLKDVFKVL
KSLLSHIKDVEDEILKETYLWTICNLALRLEYFEKDSLQRDLIKIFPYLS
NPRNRLXLFXDENFLRYHPGYFSYAGSKEINQESLSLQEFDTICFSDEEK
KCMLTQIHKLIQNSNFFLNMYSESNDTLLRVLSVMDSKIVSDLLHDLNSS
NIKESNSEKVKNEGLIMQSMLCVKFLNANQNHKVLKYLADICQEVYFYSR
GRISESYRWNSAKIACNFAAYILQLDLISQNNLFHSIWDLLSDECVEIRN
QAIQFVSILTHQTFLPSLFKAKRIFLQFILLNLSKEYHGYSPFKEFFSIS
QCEIDLFNFSDVKQYLFESEDGLNVFLDRVDNYLIIRDEISNLENHDTVT
LRKLDLKMIQSHSQMIHKCITFIQESPCHYKPFSKLWSNKLYPVIMKLVC
VLSVIDDLTPDLQALYNILKGIVISS back to topmRNA from alignment at LSalAtl2s1025:69986..76505+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000175-696022 ID=EMLSAT00000000175-696022|Name=EMLSAT00000000175|organism=Lepeophtheirus salmonis|type=mRNA|length=6520bp|location=Sequence derived from alignment at LSalAtl2s1025:69986..76505+ (Lepeophtheirus salmonis)
CTTGTCTCTAATCGATCCAAAAATAATAATACTTGTACAAATCGAGCCCT
TTTTATTAGTCATTACTTTGATATAATTAAAATGTCAGAGTGTATCATTT
GCATCATGTAGTATTCATTGCAAATGTTAAGTTTTTTTCCATTCATAAAG
CCATTTGATGAAGTTTCTTTAAGATTTTTTCAGAAATTTTTGCATTTTAT
TTGGTAAAAATATCAACATAGAGCCTCCAAGATTGCATCTCCTTCAATTA
TGATGCAATTTATGACGTCAGTGAAAATATTGAGCAGCTGTAGTAGTTTT
ACACCGCACAGGGTATTTATCTTTATCAATTCAACACATCCGATCATTTT
AACTAATTGATCAAATAACAATGATCAGAGCACGCTACAAAGATGTGTCA
ATCAATGCCAAATTGTTCAGACAATCGCATATAACTAAAGGTAGTGAGCT
TACAAGTCAGGACTTGGAGAATTGGCTTGGAAATGCCTTCAATGGTGAGT
CATGGACTTGACGAGAGTTTCTGGATTAAAATTATATTTAATTATATAGT
TTTTTCCCATGTAGATAATTTACTTTTATTTCTGCACAAGATACGAGCAG
TTCATGAATTCCTTCCCGAGTTGATTCAATATTTGGACAAAAAAATGATT
CATAATCTATGTGATGATGTATGGAGTAATGAAGAATCAGATGAAGAGCT
CTGGGCAGCCTCCCTTAAGACTGGGGTATCCCTCTTATATAATTACTACA
ATTAGCTTCTCTAACTCTACTGATTTATGTTTTTACATTTTAGATTACTT
CTATTAATTTGGACATATTTCTGAAAGCTTGCTCTTTTAAATCCTTGGAA
TTGGCCCTTGTTGCASCAGCCATTCGATCCCAATGTACATCGTCATCCCA
AGAGGAGTTTCCCGAACCTGGAACTCTTGCGGAAGCGGCTCTCATTTCTG
CTTTATCACATAGAAATCAGTGGAATAATGATGATTTAGGAATGCAAACC
CTCATATTCGATCGTATAATTATGGCTTTAAAATCAAGTTCCTTTTTGTT
CCACAACTATGACTCCCTTGGTGTATTTCTTGTTCATTCTAATTCATTGG
AATTTGCAGACAAAACACTACATATGATTGAAGGTATGAGCTCTTTTTCC
AATGTGAGAGGAGTTCAAGAAAAGACTCTAAAGACCTATGAACACGCTTG
GAACGTTCTTTCAAAAAAGGATCCTGAATATTCAAGAAGGCTGAATGAAT
CAAGGACCTATTTAACATTCAAGAAAAGTTGGAAAAGTAAAATTAAATAC
GGACTACTCTATGTGATACACTCTAGAATTAGGTCAATCGAAGATGATTG
TTCAGAGTCTATTAAGGAATTATCCATTGGTCTTATAGAGAGCCTTGCCT
CCAATTTTTTGGCTTCCTTAGGATCTAATCTTTATTCTGTGCTGCTAAAG
TCTATGAAAGCGGAAACTTGGATCAATGAGTTTTTACCGCTCTTAATTAA
TATATTTCCAAATCCTGACTCTGTGAGCATTGAATATGTTAAAAACCTTT
GGATCCCATCGATTGTTAAAATTCTACCTCTCGAATGTGCAAACTTTCTT
TATTCTCGACTGAGTCAAGGAGAGTCATCCCCAGCTTCAATTTCAGTTCA
ACTTTGCATCCTTAAAACTCAGAGAATGAATGGTTTTCTATCCGATCTTA
ACGAAAATATATTTGATAGACTTAATGAGGTTAAAGACCACTTTGATTCA
CATGTTAGGATTTCATGCTTCTCCGTCATATGTCAAAAGTTGAAAAAAGG
TTCACCACCGAGTAAAAAAGAATTTGAGCTTTTCTTGTCTATTATACGAG
ACAATCTCAACATTGATTCTTCTTCTTTCAGACAGAAATTAGTGAGTCAT
TTCACAGTGATGTTGCTCCGAGTAAGAGACTTTTGTATCAGCAGTCTTAA
GAAAAATAGTCTTGAGGAAATTATTAAATACTTTATGGAAGGAATTAATA
ATTTGGAAAAATATCTTGTCAAGCATGTTTATCCCAGCGGGAACTATCAA
ATTACAATTACTTCCTTGTGCTTGTTAGAAGTTTTGTCTCAAGTTTTCTA
CGAATCTAAAGGAGATATTATTAAAACCAGTGGTGTGAAGTCATCGGAGC
CTTTGCTAATCTACGTCCAGAAAGAGTACGGGTTTTTGAATTTTCATTAT
CAAGAAAAAAACCGTCAAATTTTACTTAGGTCACTTTTACATTATATGGA
AGACGTTCGAAAAATAGCCAAAAAGATTTTGTTTCGTTTTCCAGAGCCTT
CTAATACGGAAAGGGGCTTAATTTTAAAAAACGCTGAGCGTCTTTCAAAT
TCTCCAAAAATATCAGAGTGTGAGTCGGCTTCAGATTACTATGAGATTTT
GAACGCTTGGAGAGGAGATACGGCAAATAATAAATTTTTCGATGCTTTTT
TGATTAAATATAATTCTCTGATGGATAAATTTTCGTGTAATGGAGATTAC
AATGTACTGCAAGTTGTAAAAGAAGAGTCCTCAATGCATGGGATTCTTCT
TGCTTTGAGAAAATATTCATTCATTTATGAGCAAGAAAAAATTACAAATC
TATGTTTGGTGCGTCTTGTTGAAGCATTAGAGCGATCCGTCCAAACGATG
TTACGAATAATGAATCCTGACAATGAAGAAGAAAATCCGTCTTTTGAAAA
GATGGGCGTTTCAATACAATCCTATTTAGAGGATGAAGATGAAATTCCAA
TTGAGATATCAGGTGATCACCAATTATTATTGTCTTGTGCTTGGCTAAAT
ATTAAAGAATGCGCACTTTTGTCGGGGTTTATTGTGAAATCCTGCCATTT
AGTCACTCATCCTGAAGAAAGTGAAATATTTACATTGAGTCAGGATCTTG
TAGACCGCTGTTGTAAGATTGTAATGACTATTCTTCGATGTTGCAGACAC
AAAGGCATCATGGAAGGAACAAATTTAGCTGTAGAAGACATAGCCACTCG
TTTACTTAGTGAAAAGTCTCCTTGGAAGGAAATACCAATGAATATTTTGG
AAAAGGTGCTTAAAGAAATTGTATTTCAATCAAGCTCAACCACGAGAAGA
AGTGCAGGAATACCAATGCTACTTCAAGGCCTTGTTTCGAGTGAAGCCAA
ATTACGCCGTGATTCCAATTTACTTGAGACTTCAATTAAAAAACTTCTTG
ATATAGCATCATCACCTACATTAACTTATGAATCAATGGATTCTTCAGCC
TCTCATGCTTTACACATCCTTAAATCCCTCGTGAATAACTCGTCCATTAG
TAGTGGGATATCTCCATTTTTAGAAAAGCTATTTATTTGTTGTGTCAATA
ACTTTTCTTCAGATTCTTGGGGAATTCGAAATGCCTCACTCCAACTTTTT
GGAGCTTTGCAACCTCGGCTCATTGGTCAAAAAAAGTTGAGAGATGACGA
TTCTGAGCATAATATGGTATTTGCAAAGGACTTTTTTGATCAATATCCGG
ATCTTTCCGAATATATACTCCTTCAGTTACAAAAGCCAACTCAACTTTCA
AGGGAGGCACTCTTTGACAATCAGGTGCTGATGCCTTTGTTAACACTCTT
ATCCAAGTTGAATAATGGAGAAAAGGATCCTTATGTCCTTTCTAAACCAT
ATAAAAAGGCCTTTATTCCACATTTGTTTTCTCCTGTTATCAATATAAGA
AAACTTGTTACACGTTGTATGAAAAGATTTTCCACTGATTTGGAAAATGA
TTTTTTGGAACTTTATATTTTAGCTCTTCAAAGTAACTCTGCCAATTTTC
TACATTCGATGTCCTATCTCCTAGAATATCTCATGGAATTACATCCATCA
TCTCTTATCGGAAAAGTATTTATTCAAACCTTTCACCTATATCCCTGTTT
TGAAATTAGATCTCTACTATCCAAATATATTGTAAAGGATTTTGACATTC
CATGGGAAGAAGTGTCAAGGATTTTTATCATATATAATTCCTTTACTCAT
TATCTTATTGAACTGTCCGATATCAATTGCTTGAAAAAATACGGGTTCTT
AGAACTGGACTTTAGCAGTGAAAAATATGAGGAGTCAATTTTGGAATTTA
TGGGTGCTATTGAAAAAAATCGAACATTAATTGTCACTGATTCCTCGCTA
CAGAAAATATGTATCGAATATTTTAAAAGTGACGTTAAAGAATTACGGAG
AATGTCTAGTCGTGTTTTTTCAACATTATTGCCTCTAAAAGATGTATTCA
AAGTACTTAAAAGCTTGCTTTCTCATATTAAGGATGTGGAGGATGAGATA
TTGAAGGAAACGTACCTTTGGACAATTTGCAATCTGGCTTTAAGATTAGA
GTACTTTGAAAAAGATTCCCTTCAGAGAGACCTTATTAAAATATTTCCTT
ACCTTTCTAATCCGCGAAATCGGCTGMTGYTGTTTTRTGATGAAAATTTT
TTGAGATATCATCCGGGMTATTTTTCCTATGCAGGAAGTAAGGAAATAAA
TCAAGAGTCACTATCACTTCAAGAATTTGATACCATCTGTTTCTCAGATG
AGGAAAAGAAATGCATGCTCACTCAAATACATAAACTAATTCAAAATTCA
AACTTTTTTTTGAACATGTATTCTGAGAGCAACGACACACTACTCCGTGT
GTTGTCAGTCATGGATAGTAAAATTGTCTCGGATCTTCTTCATGATTTAA
ATTCTTCCAATATTAAGGAGTCCAATTCCGAAAAAGTAAAAAATGAAGGA
CTGATCATGCAAAGTATGCTCTGCGTAAAATTTTTAAATGCAAATCAAAA
CCATAAAGTACTTAAATATTTGGCAGATATATGCCAAGAGGTATATTTTT
ATTCAAGAGGACGTATTTCGGAGAGTTATCGATGGAATTCTGCAAAGATT
GCCTGTAATTTTGCTGCCTATATCCTTCAACTCGATCTTATTTCTCAGAA
TAATCTATTTCACTCTATCTGGGATTTGCTCTCAGATGAGTGCGTTGAGA
TTCGAAATCAAGCTATTCAATTTGTATCCATTTTGACTCACCAGACATTC
CTTCCTTCTCTATTTAAAGCAAAAAGGATTTTCCTCCAATTCATATTGCT
CAATTTATCAAAGGAGTATCACGGTTACTCTCCATTCAAGGAATTTTTTA
GCATCAGTCAATGTGAGATTGATTTATTCAACTTTTCTGATGTGAAGCAA
TACTTGTTCGAGAGTGAGGATGGTTTGAATGTATTTTTGGACAGGGTTGA
CAACTATCTTATTATAAGAGATGAAATATCTAATTTAGAAAATCATGATA
CTGTTACCCTTAGGAAATTGGATTTGAAGATGATTCAGTCGCACTCTCAA
ATGATCCATAAGTGTATTACATTCATTCAGGAGAGTCCATGCCACTATAA
GCCATTTTCCAAGTTATGGAGCAACAAATTATATCCTGTAATAATGAAGC
TAGTATGTGTCTTGTCAGTCATTGATGACCTTACTCCAGACTTACAAGCT
TTGTATAACATCTTGAAGGGAATTGTTATTTCAAGTTGACGCGTCATATC
TGCTTTTCTATAGTTTTTATTCAATGTCGTTTCAGGCATAAATATTGATT
TATTTCGTTCATAGTTCACTTTATTTTCTTAAATAAACGACTATTCATAA
TGTGTATTGTTATCGATATAAAAAAAAAAATAATATTAAAAGTGTCCCGA
TTTTCGAGAGAGAGAAGGAATCCCACATCAAGTATCAACTATCACTAGAT
TAGTAGTTTTCTCTTTCATAATTCATGATCAATAACATAAAATAATATAT
TATCTAAATAGACAATTAACAACTAATAAAGAAAAAGATTTTTTTTTTTA
ATAAAAAAAAAGAAGGAAGTTCGTAAACATAAATGCTAATTAAACCAATC
GAGAACCTTCTTTCGCTTTGGTTGCAATGGTGGAGAGGCTCTTAAATCAT
AGTCCGTAGGATAATTAATAAAAGTGGGGCCATTGAGCTTAAAAATCCAT
ACAAGAAGTGTTAAAATTAAAGACAGTAGAGCAATGATAGGCTTATTATC
CTCCGGAGATAAAACTACAAGTAAAAGAATAAATAGAGACAGAAATCCCT
TTAAGATGGAAGGCAGCATCTTAATTGGGGAGTGACTACTTGACTTTTGC
TTAGTATGACTCATTTGAATGGAATGAAGAGGCAAATGACCAACAAAGTA
GTTAAGAGCATCTGTACGAAATCCATCGCTAAAGTTATTGAGCGCATATC
TATTAAGAGAGTTCCACCCATCCTGCAACATTCCCCATTTAGTTCTCACT
CCAGTACGAGTAAAATCCGTTTTAAGTGCTCCCGTTCCAGAGTATTGAAT
AGAAATTAGATTTGCGTGATCTGCCCAAGCGTTCTTATAGAGGGATTGGA
AAGTGGAATAATTTAAAATGGAATCATGTTTGTCAAAGACTTTGGTTCTT
TTGAGAACACTATTGATATGCTCCGTTGCTAAAAGACTTTGAACGACATT
GGTGCGGTCCAAGCAGTCCA back to top
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