EMLSAT00000000182, EMLSAT00000000182-696029 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000182
Unique NameEMLSAT00000000182-696029
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1028supercontigLSalAtl2s1028:53366..55805 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000182 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000182EMLSAG00000000182-682948Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000855EMLSAE00000000855-709783Lepeophtheirus salmonisexon
EMLSAE00000000856EMLSAE00000000856-709784Lepeophtheirus salmonisexon
EMLSAE00000000857EMLSAE00000000857-709785Lepeophtheirus salmonisexon
EMLSAE00000000858EMLSAE00000000858-709786Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770777auto770777Lepeophtheirus salmonispolypeptide
EMLSAP00000000182EMLSAP00000000182Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000182

>EMLSAP00000000182 ID=EMLSAP00000000182|Name=EMLSAP00000000182|organism=Lepeophtheirus salmonis|type=polypeptide|length=528bp
MTGYDGGGDAVIMSNRQTLNNINNRSMLEATAYDNLIRQGSGESSYSHPS
SEISLGDSYGGGIDPXSCHQPLPHQSVVMNAGYARDTEQNALICLERARS
KPVAFSVRTNVMYDGSQDDDSPVHGSAVSFHIGDFLHIFEKYDVNWWIGR
IVKEGCDIGFIPSPAKLEQLILQQAPVGKGSKLKSQSSGNIQQVMTNSRG
STPPTPGLDLDQNGDTGGSGVRVTAPPVIERKKGLLGKKQETLSPYDVVP
SIRPLVIVGPSLKGYEVTDMMQKAENHHYPCYCRHFFRKKSVLNNPSKRA
ILDKANFRSSNLAEVQSEIERIFELSRSMQLIVLDCDTVNHPSQLAKTSL
APIVVYLKISSPKVLQRLIKSRGKAQSRNLNVQMVAAEKLQQCPPEMFDV
ILDENQLDEACEHLTEXLDSYWRXANPPLKMGNXVPSTPATKARKSENNP
TSGTVTVPPDPNASPSGVGGGHMSSSHNRRGVSAGNGNGEQIPPQQNRRG
EHMMAEDIIIEEGDTTIKEVIANIHPMN
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mRNA from alignment at LSalAtl2s1028:53366..55805+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000182-696029 ID=EMLSAT00000000182-696029|Name=EMLSAT00000000182|organism=Lepeophtheirus salmonis|type=mRNA|length=2440bp|location=Sequence derived from alignment at LSalAtl2s1028:53366..55805+ (Lepeophtheirus salmonis)
ATGACCGGATATGACGGTGGAGGAGATGCGGTTATAATGAGCAATAGACA
AACTTTAAATAATATAAATAATCGTTCAATGCTCGAGGCCACTGCATACG
ATAATTTAATTCGACAAGGTTCCGGAGAATCAAGCTATTCTCATCCCTCT
TCTGAAATATCACTGGGAGACTCCTATGGTGGAGGTATTGATCCAMCTTC
CTGCCAYCAGCCACTTCCACATCAATCTGTTGTTATGAATGCGGGCTACG
CTCGAGATACCGAACAAAATGCTCTGATATGCCTGGAAAGAGCAAGAAGT
AAGCCTGTAGCCTTTTCAGTACGGACAAACGTCATGTACGATGGAAGTCA
GGATGATGACTCTCCGGTTCATGGCTCGGCTGTCTCCTTTCACATTGGAG
ATTTTCTGCACATATTTGAAAAGTATGATGTCAATTGGTGGATTGGGCGT
ATCGTTAAAGAAGGCTGTGATATTGGGTTCATTCCGTCTCCCGCAAAGTT
GGAGCAATTGATACTTCAACAAGCTCCTGTTGGAAAGGGATCCAAACTGA
AATCTCAATCTTCTGGAAATATTCAGGTATTTTCGAAAGATGAATGAATG
ATTTGATTTAATTTTCTATCCAATTCTCAGTTTGAAATTATGATATTTTT
GAGTTTTACATTTTAATTTTTGAGGGATAGTGCCATTTTGTTATCCTATG
TGCTCGCTCCACTTGTGCATTAGTGTGTATTTCCTTTGAATGATACATAA
AAGTTCATAAAATATTTCCCTTTCTCTCTCTTACAGCAAGTTATGACCAA
TTCACGTGGAAGTACTCCTCCCACCCCTGGACTTGATCTTGATCAAAATG
GGGATACTGGAGGAAGTGGAGTCCGAGTTACGGCTCCMCCTGTTATTGAA
CGGAAAAAAGGACTCCTCGGAAAAAAACAAGAGACTCTTTCTCCGTACGA
TGTTGTGCCTTCCATCCGGCCACTCGTGATAGTTGGACCCTCCTTAAAGG
GCTATGAAGTCACGGACATGATGCAAAAAGCGGTGTTTGAATACTTAAAA
AACCGTTTTATAGGAAAATCATCATTACCCGTGTTACTGCAGACATTTCT
TTAGGAAAAAATCCGTGCTCAATAATCCATCAAAACGAGCCATCTTAGAC
AAAGCAAACTTTAGATCCTCTAATTTGGCTGAGGTTCAGTCTGAGATCGA
AAGGATCTTTGAACTCTCGCGAAGTATGCAACTCATCGTTCTCGATTGTG
ATACGGTCAATCATCCTTCTCAGCTAGCTAAAACCTCCTTGGCACCCATT
GTAGTTTATTTAAAAATTTCATCTCCAAAAGTACTCCAAAGGCTTATTAA
ATCTCGGGGTAAGGCTCAATCCCGAAATCTAAACGTCCAAATGGTTGCTG
CTGAGAAACTCCAACAATGTCCGCCAGAAATGTTTGATGTCATATTAGAT
GAAAATCAGCTTGATGAGGCATGCGAGCATCTGACCGAATWCTTGGATTC
TTATTGGAGASCTGCCAATCCTCCTCTGAAGATGGGTAATAAKGTGCCGT
CCACTCCGGCAACAAAAGCCCGTAAATCTGAAAACAATCCAACGAGTGGA
ACTGTAACTGTTCCTCCAGATCCCAATGCTTCCCCCAGTGGCGTTGGTGG
TGGTCACATGAGTTCCTCCCATAATCGGAGAGGTGTAAGCGCTGGAAATG
GTAATGGAGAACAGATTCCTCCTCAACAGAATCGAAGAGGGGAACATGTG
MCTCTATCTCCAGGAGCATACCATCMCCCTCATCATCATCCATCCCAACA
AACACCCACTCAATCCCAACAGCAGCAACAGCAACCGCACCTACCACCCC
AACCCTCACATGCTCTGCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNAGKGGAAGAAGACGATGGKCGGKATCGKCAAAAWAAWATTCCGGR
GGRGATGGGRTATCCATCTAKAGATCATCATTATATAGATGAGCGTAATA
ACTATCCAGATGATGGCCGAGGATATAATAATAGAGGAGGGAGATACTAC
AATCAAGGAGGTGATCGCCAATATCCACCCCATGAATTAG
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