EMLSAT00000000198, EMLSAT00000000198-696045 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000198
Unique NameEMLSAT00000000198-696045
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1029supercontigLSalAtl2s1029:42010..43124 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000198 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000198EMLSAG00000000198-682964Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000916EMLSAE00000000916-709844Lepeophtheirus salmonisexon
EMLSAE00000000917EMLSAE00000000917-709845Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770351auto770351Lepeophtheirus salmonispolypeptide
EMLSAP00000000198EMLSAP00000000198Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000198

>EMLSAP00000000198 ID=EMLSAP00000000198|Name=EMLSAP00000000198|organism=Lepeophtheirus salmonis|type=polypeptide|length=274bp
MKIAGFTSLGIVFFSTLTFIIQTFPEFQYEPEKGIYPEHPEIVKGFQIID
DISIIFFTFEYLVRFICSPRKWIFFKHPMNFVDLLAIIPFYFTLLLDSME
DMQIIGKAGKLVRLIRVLRIMRIFKLVRHFAGLQSLIYTLNQAYKELGLL
MLVVTVAVLTFSSLVYFAEKDVEGMNWTFLDSFWWGIMTLTTVGYDQRSP
QSVFGKIIGSVCALSGVFILTLPIPIVVNSFASYYKNRLWRNEVAHKRKE
KMKTLEEKTESGEKEFSIDDLCIT
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mRNA from alignment at LSalAtl2s1029:42010..43124+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000198-696045 ID=EMLSAT00000000198-696045|Name=EMLSAT00000000198|organism=Lepeophtheirus salmonis|type=mRNA|length=1115bp|location=Sequence derived from alignment at LSalAtl2s1029:42010..43124+ (Lepeophtheirus salmonis)
ATGAAAGTTAATATTTACCTTCCTTTTTTTTTGTATTAAATTAAATTTGA
TTGTCATTGCTTTCATTTAAACAAGAATGCCATTAAACCTATATGAGACA
ATTTAAGAAATAGTCCTATTGTGGTGACATAACAAAAAGATAATATATTC
TTCAAGAATTAGATACAAAGGATTTTTTATGTAGAGTCAAAGAAGAAGGG
ATGTGAACTTATTTTCTTTTATTTTTTTCTCTATTATATACCTAATACTT
GGCTTGATCCATTTTAACTCACATAATAATATGTACTTCATTTCAGATCG
CAGGATTTACTTCATTAGGAATCGTTTTTTTCTCAACATTGACTTTTATT
ATACAAACATTTCCAGAATTTCAGTACGAACCAGAAAAAGGTATATACCC
TGAACATCCAGAAATTGTTAAAGGATTTCAAATCATTGATGACATATCAA
TTATATTTTTTACATTTGAATACCTGGTGCGTTTCATTTGTAGCCCACGG
AAATGGATTTTTTTCAAGCACCCAATGAATTTCGTGGATCTCTTGGCCAT
TATTCCCTTCTATTTCACTTTATTACTCGACTCAATGGAAGATATGCAAA
TAATTGGAAAGGCTGGAAAATTGGTGCGACTTATTCGAGTTTTGAGGATA
ATGAGAATTTTCAAATTGGTTCGTCACTTTGCAGGTCTTCAGTCTCTCAT
CTATACACTGAATCAGGCTTATAAGGAATTGGGACTTTTAATGCTAGTTG
TTACTGTAGCAGTTTTGACATTTTCTTCCTTAGTTTATTTCGCAGAAAAA
GATGTTGAAGGGATGAACTGGACTTTTTTAGATAGTTTTTGGTGGGGAAT
CATGACACTCACAACAGTAGGATACGATCAACGAAGTCCCCAATCTGTCT
TCGGAAAAATAATTGGAAGTGTGTGTGCTCTTTCAGGTGTATTTATTTTA
ACCCTTCCAATTCCTATTGTGGTTAATAGTTTTGCCTCATATTATAAGAA
CAGATTATGGAGGAACGAAGTTGCTCATAAACGGAAAGAAAAAATGAAGA
CACTTGAGGAGAAAACTGAATCTGGAGAAAAAGAATTTTCCATTGATGAT
CTATGTATAACATAA
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