EMLSAT00000000215, EMLSAT00000000215-696062 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000215
Unique NameEMLSAT00000000215-696062
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1031supercontigLSalAtl2s1031:118223..119431 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000215 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000215EMLSAG00000000215-682981Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000986EMLSAE00000000986-709914Lepeophtheirus salmonisexon
EMLSAE00000000987EMLSAE00000000987-709915Lepeophtheirus salmonisexon
EMLSAE00000000988EMLSAE00000000988-709916Lepeophtheirus salmonisexon
EMLSAE00000000989EMLSAE00000000989-709917Lepeophtheirus salmonisexon
EMLSAE00000000990EMLSAE00000000990-709918Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772589auto772589Lepeophtheirus salmonispolypeptide
EMLSAP00000000215EMLSAP00000000215Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000215

>EMLSAP00000000215 ID=EMLSAP00000000215|Name=EMLSAP00000000215|organism=Lepeophtheirus salmonis|type=polypeptide|length=282bp
MRSFTIFVNQTLFVIVLSVFAVQVSLGAGKREFSKRNKGFAHRDGGGGGG
GGGGYAYGNSGFSGSGXGGGGGGGYGGGGGHGGGGGYGGGGGSPDKFKDK
LSLLPLLALAPLALLALPLLFPTTTMVIPPVIPMMMGKRKKRAIGSEEEQ
ILRSFLYEALKEENTHFKSNSSTSRSLSPSAILSKYMSCDSQHILERCFE
RLVCEYKSPTTQMEELEQQVTEITLRILMSKSHLDESLMDRLNRASTYGI
KNVSSCQKRYPCDVDVSSMTRVRKTKNSTQFA
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mRNA from alignment at LSalAtl2s1031:118223..119431-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000215-696062 ID=EMLSAT00000000215-696062|Name=EMLSAT00000000215|organism=Lepeophtheirus salmonis|type=mRNA|length=1209bp|location=Sequence derived from alignment at LSalAtl2s1031:118223..119431- (Lepeophtheirus salmonis)
ATGAGATCCTTCACAATATTTGTCAATCAAACAGTAAATCATTTTCACAT
TATAAAAAACTATATCTATAGAAATAAGTATTGTTTTTCTTTTTATTTTA
TAGTTATTTGTAATTGTCCTAAGCGTGTTTGCGGTTCAAGTCTCTTTGGG
AGCTGGAAAAAGGGAGTTCTCGAAGAGGAACAAGGGATTTGGTGAGTTAA
TATATTTGACGAGTATATCAGAGTACAAAATACATATCAAAAATTATCCA
ATTAGAGATAGATATTGAATATTTTGAAATAAAGTTATTCTATTGCATTT
CAGCTCATAGGGATGGAGGAGGAGGCGGTGGTGGAGGAGGAGGCTACGCC
TATGGTAACTCTGGATTCAGCGGAAGCGGGKATGGAGGAGGTGGTGGTGG
CGGCTATGGTGGAGGAGGTGGACATGGCGGCGGGGGTGGATATGGCGGCG
GTGGAGGTAAGTTTGTGAACGAGTACGATGAATGCTCAACATTAGTTAAT
ACCACTTAATTAGTTATGTATACATTGAATAATCATCCATTCCATAGGTT
CTCCTGATAAGTTTAAAGACAAACTAAGTCTTCTGCCCCTACTGGCTCTT
GCTCCACTCGCTCTTTTGGCTCTTCCTTTGTTATTCCCCACGACAACAAT
GGTCATTCCTCCAGTTATACCCATGATGATGGGTAAAAGGAAGAAACGAG
CCATTGGGAGTGAAGAGGAGCAGATCCTCCGGTCCTTTCTCTACGAAGCC
CTCAAGGAAGAGAACACACATTTCAAATCCAACAGTAGCACATCAAGATC
CTTATCCCCTAGCGCCATTCTATCAAAGTACATGTCCTGTGATTCTCAAC
ACATACTAGAGCGCTGCTTTGAAAGACTCGTCTGTGAATACAAGAGTCCT
ACAACTCAAATGGAAGAGCTTGAGCAGCAAGTGACAGAAATGTAAGAGAA
CTTGAGGGTTTTTGCATGTCATAGTTATACATCAGCTGCTTAGTTTCTTT
AATTTATATTCTACTATTCCTTTTTTAGTACGTTAAGAATACTCATGTCA
AAGAGTCATTTGGATGAGTCTCTGATGGATCGATTGAATCGGGCATCTAC
CTATGGAATCAAAAACGTGAGCTCTTGTCAGAAAAGATATCCTTGTGATG
TTGATGTGTCCAGTATGACGAGAGTTAGGAAGACTAAGAACTCTACTCAA
TTTGCCTAG
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