EMLSAT00000000239, EMLSAT00000000239-696086 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000239
Unique NameEMLSAT00000000239-696086
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1032supercontigLSalAtl2s1032:177921..179596 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000239 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000239EMLSAG00000000239-683005Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001079EMLSAE00000001079-710007Lepeophtheirus salmonisexon
EMLSAE00000001080EMLSAE00000001080-710008Lepeophtheirus salmonisexon
EMLSAE00000001081EMLSAE00000001081-710009Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773934auto773934Lepeophtheirus salmonispolypeptide
EMLSAP00000000239EMLSAP00000000239Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000239

>EMLSAP00000000239 ID=EMLSAP00000000239|Name=EMLSAP00000000239|organism=Lepeophtheirus salmonis|type=polypeptide|length=130bp
MERIYEQKAVIISFFSNLKDNISLVPVSSKEWLDLDDYVRSFSFVYYVTL
ELCEEKSVTSSKIIPMTKQMLKTYETRIQASYSDRRLANAENELNIFCIE
NPLDKSTDPLLWWHMNKMKYPLQSLLSESE
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mRNA from alignment at LSalAtl2s1032:177921..179596+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000239-696086 ID=EMLSAT00000000239-696086|Name=EMLSAT00000000239|organism=Lepeophtheirus salmonis|type=mRNA|length=1676bp|location=Sequence derived from alignment at LSalAtl2s1032:177921..179596+ (Lepeophtheirus salmonis)
ATGGAAAGAATTTATGAACAAAAAGCCGTTATCATTTCGTTCTTTAGTAA
TTTAAAAGACAATATAAGTTTAGTTCCTGTTTCTTCCAAAGAGTGGTTGG
ACTTAGATGACTACGTAAGATCCTTTTCATTTGTTTACTACGTGACTCTA
GAACTGTGCGAAGAAAAAAGTGTTACCTCATCTAAAATTATTCCAATGAC
AAAGCAAATGTTGAAGACATACGGTAATATCTTAGAAAACAATTCATTCT
CTGAGAATAGTATTGGATTGATTTTAACTAGAGCTCTAAAAAATGACCTA
CTTTTTTGCTTTAACAAAATTGAAAATGTTAGTGCATTATCCAAAACGTC
GATATTAGATCCAAGATTTAAAAAAAAAGCCTTTAGGGATGTAAATAAAG
CTGAAACGTCCGTATATCAGTTAAAACAGGAACTGATATCCCTGCAGCCA
ATTCCCTTAATGGAATTCGAATCAAATACACATTGAAGTGATTTATAACA
CCGAAAGTGTAAAAATTTTTGATAGCATTTGGAATAACTCCTTTGAAGAA
ACTCGCATTCAAGCGTCCTATTCGGATAGAAGGCTGGCAAATGCCGAAAA
TGAACTGAACATCTTTTGTATTGAAAACCCATTGGATAAGTCAACAGATC
CTCTTTTGTGGTGGCATATGAACAAAATGAAATATCCTTTACAGGTAAAA
TTGGCCTATAAATATTTTAGTGTGCAAAGTACAAGCGTGAGTTTCGAGAG
ATTATTCTCAACTGGGGGCCAGGTATTGAATGACAGAAGAAACAGACAAT
CGGAATTAAATACAGAAAAATTAATTATCCTGAATATCAATCTTCGTCGT
GATAATAAACTCCGTCAATATTACAATGAACATGAAATTGGTAATCTTAA
TTATMCTATAGAAGTWAACTTACGTCTCTTAGATGTATAGAAAAGATATG
ATGATATTTGTTTATAAAAATTCTAATTATATTTTWKTGTATCATACTAT
AATGATAAATAATTAATAAATATTTAAATTTTAAAACATCAGGTTTTTAT
AACTTTTCAAAAAAATATTCAAAGAATGTAGTTAATGTGTTATCGAAGGA
CGGATTTTTAATTAATACAGTATATAATACAGTTAATATAAGTATTTAAA
CCATTAACTATTGTGAATTTATTCAATTCCAGTCAATCTTTTTGAGAAGC
TAGAAATTGAAATGATAAAATATAAATTACCATAAAGGTGTCTCGCTTTT
ACATATGATTATCNTTTTTATGCTAAAAATGTCCTTTCTATTATTTTTTA
AAGAGGTATAAAAGTTATSAATGATATTTGTAAGTATGAATTAATTACCC
TGGGGAACATAAAATTTATACCAACGAATTGAATACAGAATTCCGAATTC
CAACATATCATGAGATGGATGATCAATTTATGAGTTTCGATTCCCTCTAT
CTTTCCTTTGTCCTAACTATTGGAGATCATTGAAGTCCACTTCTTCCGAT
CTTAATAAATTAAGAATGATCTTAAGCCTTAGCAATTGTCAAATTAAAAG
GACATCTAGATTTCAATTTTTATATATTTTAGTTGTATAGTTATAATTTC
ATATTGTAGACGTACCTAATTAACATATCTTTATTTTATATTTAACATCC
AGAGCCTTTTGTCTGAAAGTGAATGA
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