EMLSAT00000000241, EMLSAT00000000241-696088 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000241
Unique NameEMLSAT00000000241-696088
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1033supercontigLSalAtl2s1033:76247..77396 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000241 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000241EMLSAG00000000241-683007Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001084EMLSAE00000001084-710012Lepeophtheirus salmonisexon
EMLSAE00000001085EMLSAE00000001085-710013Lepeophtheirus salmonisexon
EMLSAE00000001086EMLSAE00000001086-710014Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771469auto771469Lepeophtheirus salmonispolypeptide
EMLSAP00000000241EMLSAP00000000241Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000241

>EMLSAP00000000241 ID=EMLSAP00000000241|Name=EMLSAP00000000241|organism=Lepeophtheirus salmonis|type=polypeptide|length=154bp
MPIPSSPIKNEINDSKSSNKTLSNGNAQIQRRKFGIRSKTVMDCHSYMEN
KQSVPPKAKRSSSVKDCRMTHSRSSGRSSPRTPQKSPSDQSMGSKTWDTT
EKVLGVHTVLGTAGLTSTSLITIPSLGGGIVGGCAAAALGVATAASFVTG
VGEF
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mRNA from alignment at LSalAtl2s1033:76247..77396-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000241-696088 ID=EMLSAT00000000241-696088|Name=EMLSAT00000000241|organism=Lepeophtheirus salmonis|type=mRNA|length=1150bp|location=Sequence derived from alignment at LSalAtl2s1033:76247..77396- (Lepeophtheirus salmonis)
ATGCCGATCCCTTCTTCTCCCATTAAGAATGAAATTAATGATTCAAAAAG
CTCCAATAAAACATTATCCAATGGAAATGCTCAGATTCAAAGACGAAAAT
TTGGTATCCGAAGTAAAACTGTAATGGACTGTCAGTGAGTCATTTTTTTA
CTCTAAAGTCCAACTTAATAATTTCTTCAATGTAACATATATGTATACTT
TCAGTTCTTACATGGAGAATAAACAGTCTGTTCCCCCTAAAGCAAAGCGA
AGTTCAAGTGTAAAAGATTGTCGAATGACTCATTCTCGTTCGTCTGGAAG
ATCAAGTCCAAGAACACCGCAGAAATCTCCATCAGATCAATCAATGGGAT
CAAAAACTTGGGACACGACAGAGAAAGTCCTGGGCGTTCATACGGTTTTA
GGAACGGCAGGGCTAACATCCACATCCCTGATTACAATTCCAAGTCTAGG
AGGTGGGATCGTTGGTGGTTGTGCGGCTGCAGCCCTAGGAGTTGCAACTG
CTGCTAGTTTTGTGACTGGCGTTGGTGTAATTGCAGGANGTTCAAGTAGT
CTGAGTGAGGACTAATTTATTCATCCATATTATACAATATCATGTACATT
ACCTGAACTTTACCATTACATATTATATCTGTCCTTCTAAGAATGGTTGA
ATCTTGAAATCCAAGTACGCAGTGTTGCATATCTTATCTTTAAATTCATA
TATTAACTATTAGAGATGGGAAAGTTGCTGGAATCCCGGGGAGTATATAT
ATTTTTACCTGTAAAACATTTTTTCACTTATTGACATGTATTTCTCCTTA
TTGTGAACATCCAAACATTCTCAGCAGGAAAAGGGTGCATTGATGATCTT
GACTCGTTTTACGCTCGCCGGAATTCCAGTAATTTTTACATCCCTAAATT
ATATTTCGTATGTTAAATACTTCCCTTACGCTTACTTAGATTATTTTTAT
GAATGTTTATCAAATCATTGTAATACATATTTACTGTAAAAAGATAATAT
GTAAATTTATAATTGTATATTTTTATAAATGTAAGTCACTTTGATAGTTT
AGATATTTTTTTGCACCAAAGAATAATATATCAGAATGTGTATGTAAAAA
ACAAAAGAAAGAAAATTCGTTGTTAATTATTTTACTTTTAGGAATTCTGA
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