EMLSAT00000000266, EMLSAT00000000266-696113 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000266
Unique NameEMLSAT00000000266-696113
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1040supercontigLSalAtl2s1040:2470..5441 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000266 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000266EMLSAG00000000266-683032Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001230EMLSAE00000001230-710158Lepeophtheirus salmonisexon
EMLSAE00000001231EMLSAE00000001231-710159Lepeophtheirus salmonisexon
EMLSAE00000001232EMLSAE00000001232-710160Lepeophtheirus salmonisexon
EMLSAE00000001233EMLSAE00000001233-710161Lepeophtheirus salmonisexon
EMLSAE00000001234EMLSAE00000001234-710162Lepeophtheirus salmonisexon
EMLSAE00000001235EMLSAE00000001235-710163Lepeophtheirus salmonisexon
EMLSAE00000001236EMLSAE00000001236-710164Lepeophtheirus salmonisexon
EMLSAE00000001237EMLSAE00000001237-710165Lepeophtheirus salmonisexon
EMLSAE00000001238EMLSAE00000001238-710166Lepeophtheirus salmonisexon
EMLSAE00000001239EMLSAE00000001239-710167Lepeophtheirus salmonisexon
EMLSAE00000001240EMLSAE00000001240-710168Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768284auto768284Lepeophtheirus salmonispolypeptide
EMLSAP00000000266EMLSAP00000000266Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000266

>EMLSAP00000000266 ID=EMLSAP00000000266|Name=EMLSAP00000000266|organism=Lepeophtheirus salmonis|type=polypeptide|length=397bp
MSGQSSPSIMRTLPLFFFLLASKIPSIDANCLTTSGSSCVFPFTYSGTTY
TSCTTVDYGTTLWCATSVTGSGEVNNYGDCSTSCPVESTVSKAGCPTTGS
RPCVFPFTYNGVEYSTCTTVDFGSTSWCAVAVSSSDVVTSYGICSSSCPK
ESTLAPSACGTTDGRGCKFPFKYGGVTYSDCTTIDNSGTPWCSTSVNAAT
LEVINYGTCNSNCLGCSAVNGXACVFPFSYNGNMYSACTTVDNGNVHWCA
TSNTASGEVNTYGDCATDCPTETTVSTAGCPTSNGGRCTFPFVYLGVTYE
KCTNIDFGTIFWCATSVDSSNGVNSFGTCSSTCPRETTLASNVCATLRGS
KCVFPFMYNGVTYNSCTTVDFGSTKWCATSVDASLNQLTYGICGSSC
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mRNA from alignment at LSalAtl2s1040:2470..5441-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000266-696113 ID=EMLSAT00000000266-696113|Name=EMLSAT00000000266|organism=Lepeophtheirus salmonis|type=mRNA|length=2972bp|location=Sequence derived from alignment at LSalAtl2s1040:2470..5441- (Lepeophtheirus salmonis)
ATGAGCGGACAATCATCTCCAAGCATTATGAGGACTTTACCTCTCTTCTT
CTTTTTATTAGCCTCTAAAATCCCATCTATTGGTAAATATATTCATGTAT
AGAAGTAAATTACTATCAGTTTGTTCATGAACGTGTTTTAGATGCAAATT
GCCTAACAACGTCTGGTAGTAGTTGTGTATTTCCTTTCACCTATAGTGGA
ACGACATATACTTCTTGCACCACTGTTGACTATGGAACAACTCTCTGGTG
TGCTACATCTGTAACAGGATCCGGAGAAGTGAATAATTATGGTGATTGTT
CAACATCATGTCCAGGTAAATTAACTGATTACCATAACATATGATTGTAT
CATTTTATCAACAATAAGTCGTATATTTTATTTTTCATAGTTGAATCTAC
TGTTTCAAAAGCCGGTAATTATAGCGTGTAATGTCCAAATTAAGTTACAA
AACAATTTACTCTTTTAAATTAGGATGTCCAACCACTGGGTCTCGACCTT
GTGTTTTCCCATTTACCTATAATGGAGTGGAATACAGTACTTGTACAACT
GTTGATTTTGGATCCACTTCTTGGTGTGCTGTTGCTGTCTCATCATCAGA
CGTAGTCACATCATACGGAATTTGTTCATCCTCATGTCCTAGTAATTACT
TAATTGTATTCTATTTTAATCTTCATAACACAATTACATGTATTTATTTT
TTACTCCAACATTAGAGGAATCAACATTGGCTCCATCAGGTGAGAATATA
AAAGTAAATAGATTTTTCATTTAAAAATATTTTCGTACTATGTTCTGTAG
CATGTGGTACAACTGATGGACGAGGGTGTAAATTTCCTTTTAAATATGGA
GGAGTTACATACTCTGATTGTACTACAATTGATAATTCTGGGACTCCTTG
GTGCTCAACTTCTGTAAATGCAGCAACTCTCGAAGTCATTAATTATGGTA
CCTGTAATAGCAATTGTTTAGGTGAGTTGTATTCATTTATTTTGATTTCA
AGTCCTGAGCCCTACTAAAAAATACTTTATTTGGAATGCTGAGCCTTTAA
AAAATTTCTTATAGCTTTGTTCTGATGAAAAAATAGTTTAGATTAATTAA
TTTTGTTTAATATATTGAATGAGGAATTAAATTATAATTTCATATAAAAA
TCCTACTAGTTGATGTACCAAGCACAACAACAACCACAACAACTACTGAA
GCCACTACAACCACTACTACGACGACAACAACAACTACAACTACGACAAC
ATCCKCCACCACAACGACGACGACAACTKCRKCAACCKCTACCACAACAA
CGACTACAACTACGACGACAACTACTACAACAACGACCACAACAACAACA
ACTACAACGACAACTACTACAACCACCACAACGACTACGACAACCACTAC
TACGACGACAACAACAACAACAKCCKCCACCACAACGACWACGACAACTA
CTACAACAACAACGACRACAACGKCGKCGACAACTACRACAACCACAACA
ACAACAACGACTACGKCAACCACAACGACTACAACTACGACGACGACAAC
CANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACKACKACSACAACGACT
ACWACKACGACGACYACKACCACAACGACTACYACTACGACMACMACAAC
MACAACRACCAACAACAACAACGACAACGACTACRACAACGACGACAACC
ACCACAACGACTACAACTACGACGACGACAACTACAACTACTACAACGAC
AACGACTACTACAACGACGACAACCACCACAACGACTACAACTACGACAA
CTTTACAAGGTTCATATTTTTTTGATAAATTGATTTTCCCTTTTAACATT
TATGATTGACTATTGTAGGTTGTTCAGCGGTGAATGGTKAAGCCTGTGTA
TTCCCTTTTTCATACAATGGAAATATGTATTCAGCCTGTACAACTGTGGA
CAATGGAAATGTTCATTGGTGTGCCACATCAAATACAGCTTCTGGAGAGG
TCAATACTTACGGAGATTGTGCAACAGATTGTCCAAGTAACCTAGATTCT
ATTAAATAATATTAATGTACCTATTTGTAATTTCACACCTTTTTTTTAGC
TGAGACCACTGTTTCAACAGCTGGTAAGTTACATTTATAAATCATTGTGA
ACTATAAATGATTGTTTTAATTATTTCAGGATGTCCAACGTCAAATGGAG
GTAGATGTACTTTCCCATTTGTTTACCTAGGTGTAACATATGAAAAATGT
ACAAATATTGACTTTGGGACCATTTTCTGGTGTGCCACATCTGTTGATTC
CTCGAACGGTGTGAATTCCTTCGGTACATGCTCCTCAACTTGTCCGCGTA
AGTGTTATACATACCTGTACACATAGCATAGCCTCATAAAATTGCTCCCG
TTTTTTATTCATTATAGGTGAAACAACATTGGCTTCGAATGGTTAGTATT
CATTCTTCTTCTTTTTTATTGATGCCAAGTGAGCTCATACTTTCTTTTAT
TCCAGTGTGTGCCACACTTCGAGGTAGTAAGTGTGTTTTCCCCTTTATGT
ATAATGGAGTTACATATAATTCATGTACCACTGTGGACTTTGGAAGTACA
AAATGGTGTGCTACATCGGTTGATGCATCATTGAACCAATTAACATATGG
CATTTGCGGCTCTAGTTGTTGA
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