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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000562 | Fibronectin, type II, collagen-binding | SMART | SM00059 | FN2 | coord: 32..80
e-value: 9.2E-5
score: 20.8
coord: 217..265
e-value: 7.5E-5
score: 21.6
coord: 96..144
e-value: 7.5E-5
score: 21.5
coord: 160..198
e-value: 4.5E-6
score: 31.5
coord: 345..393
e-value: 1.8E-5
score: 26.6
coord: 281..329
e-value: 0.0012
score: 11.8 |
| IPR000562 | Fibronectin, type II, collagen-binding | GENE3D | 2.10.10.10 | | coord: 271..331
e-value: 1.7E-9
score: 36.8
coord: 148..215
e-value: 5.2E-13
score: 48.1
coord: 28..82
e-value: 2.3E-11
score: 42.8
coord: 333..394
e-value: 2.9E-12
score: 45.7 |
| IPR000562 | Fibronectin, type II, collagen-binding | GENE3D | 2.10.10.10 | | coord: 101..131
e-value: 1.3E-10
score: 40.5 |
| IPR000562 | Fibronectin, type II, collagen-binding | GENE3D | 2.10.10.10 | | coord: 218..265
e-value: 5.3E-11
score: 41.7 |
| IPR000562 | Fibronectin, type II, collagen-binding | PFAM | PF00040 | fn2 | coord: 103..144
e-value: 7.0E-9
score: 35.4
coord: 352..393
e-value: 1.3E-10
score: 40.9
coord: 288..318
e-value: 8.8E-7
score: 28.7
coord: 39..68
e-value: 1.5E-9
score: 37.6
coord: 167..198
e-value: 2.8E-10
score: 39.9
coord: 224..255
e-value: 1.0E-9
score: 38.0 |
| IPR000562 | Fibronectin, type II, collagen-binding | PROSITE | PS51092 | FN2_2 | coord: 98..146
score: 12.455 |
| IPR000562 | Fibronectin, type II, collagen-binding | PROSITE | PS51092 | FN2_2 | coord: 347..395
score: 13.286 |
| IPR000562 | Fibronectin, type II, collagen-binding | PROSITE | PS51092 | FN2_2 | coord: 219..267
score: 13.452 |
| IPR000562 | Fibronectin, type II, collagen-binding | PROSITE | PS51092 | FN2_2 | coord: 34..82
score: 13.585 |
| IPR000562 | Fibronectin, type II, collagen-binding | PROSITE | PS51092 | FN2_2 | coord: 283..331
score: 12.644 |
| IPR000562 | Fibronectin, type II, collagen-binding | PROSITE | PS51092 | FN2_2 | coord: 162..211
score: 13.386 |
| None | No IPR available | PANTHER | PTHR22918 | SEMINAL PLASMA PROTEIN | coord: 9..318 |
| None | No IPR available | SIGNALP_EUK | SignalP-noTM | SignalP-noTM | coord: 1..29
score: 0.766 |
| IPR013806 | Kringle-like fold | SUPERFAMILY | 57440 | Kringle-like | coord: 95..144 |
| IPR013806 | Kringle-like fold | SUPERFAMILY | 57440 | Kringle-like | coord: 279..320 |
| IPR013806 | Kringle-like fold | SUPERFAMILY | 57440 | Kringle-like | coord: 30..68 |
| IPR013806 | Kringle-like fold | SUPERFAMILY | 57440 | Kringle-like | coord: 224..255 |
| IPR013806 | Kringle-like fold | SUPERFAMILY | 57440 | Kringle-like | coord: 158..197 |
| IPR013806 | Kringle-like fold | SUPERFAMILY | 57440 | Kringle-like | coord: 343..393 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000000266 ID=EMLSAP00000000266|Name=EMLSAP00000000266|organism=Lepeophtheirus salmonis|type=polypeptide|length=397bp
MSGQSSPSIMRTLPLFFFLLASKIPSIDANCLTTSGSSCVFPFTYSGTTY
TSCTTVDYGTTLWCATSVTGSGEVNNYGDCSTSCPVESTVSKAGCPTTGS
RPCVFPFTYNGVEYSTCTTVDFGSTSWCAVAVSSSDVVTSYGICSSSCPK
ESTLAPSACGTTDGRGCKFPFKYGGVTYSDCTTIDNSGTPWCSTSVNAAT
LEVINYGTCNSNCLGCSAVNGXACVFPFSYNGNMYSACTTVDNGNVHWCA
TSNTASGEVNTYGDCATDCPTETTVSTAGCPTSNGGRCTFPFVYLGVTYE
KCTNIDFGTIFWCATSVDSSNGVNSFGTCSSTCPRETTLASNVCATLRGS
KCVFPFMYNGVTYNSCTTVDFGSTKWCATSVDASLNQLTYGICGSSC back to top
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