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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1041 | supercontig | LSalAtl2s1041:91150..95596 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000277 >EMLSAP00000000277 ID=EMLSAP00000000277|Name=EMLSAP00000000277|organism=Lepeophtheirus salmonis|type=polypeptide|length=1369bp
MKEQYRETDVIRKISHVCFGMQSSEEMEQCATIHTVAKNLYNQDSSRTPV
SYGVLDYRMGTSQQDKNCTTCGKGLPDCIGHFGYIDLELPVYHVGFFRSI
IQVLQSICKSCCRILLKPKSANSFLKKIRSKDLGYLTKKKLRKKILDECK
KMTHCPFCHALNGVVKKAGLLKISHEKYRYMKKTNQIILDTIEEYDFASK
DNKEIESLVSNHHALVHYLNPLEVLHMFERIRDEDISLLLMNSESAHPKD
MILTRXPVPPLCIRPSVISDLKSGTNEDDVTMKLTEIVFLNDVIMKHRLS
GATAKMIHDDWDFLQLQSALHFNSQLSGIPADKAPKKTTRGFVQRLKGKQ
GRFRGNLSGKRVDFSSRTVISPDPNLRIEQVGVPIHIAKILTYPERVHRA
NLGLMRKLIKNGPDIHPGANFVELKSKDGTTIRKYLKYGKRERIAQDLKI
GDLVERHMMDDDIVLFNRQPSLHRISIMCHRAKILEHRTFRFNECVCTPY
NADFDGDEMNLHLPQTEEARAEALVLMGNKSNLVTPRNGELLIAATQDFI
TGAYLLTSKETFLDRGKVCQIISQILASSPDDDIKIDIPPPAIMKPVQLW
TGKQIFSLLLRPNKQVRTKANLSAKGKTYTKDEEFCVNDSWVLIRNSELL
AGAMDKSTVGSGTKSSIFYILLRDWGQDIACTAMWRLSRIASWFLMNRGF
SIGIGDVTPSKSLLDSKKDLVEKGYNRCDEYISQLNAGTLQSTAGNSEEE
TLESLILKELSAIRDKAGKASLTALHKSNAPLTMALCGSKGSFXNISQMI
ACVGQQAISGKRIPDGFEDRSXPHFGRKSKIPAAKGFVENSFYSGLTPTE
FFFHTMGGREGLVDTAVKTAETGYMQRRLVKSLEDLVQHYDNTVRNSSNE
VIQFVYGGDGLDPMMMEGKDRPVDFQRVLDHIKAISPYSTEDPMDAETLM
SATDELINDLIGPSQEFKEELRNFLIEYSKKVAKVWKLFNLNAGKFRPVE
KHIERLTLSQLVEFVEKCKEKYMKAAIEPGTAVGALCAQSIGEPGTQMTL
KTFHFAGVASMNITLGVPRIKEIINASKKISTPIIKVFLEDDTDPEFARI
VKGRIEKTTLGEVTEYLEEVFLPDDCLLLIKLDIERIKLLKLEISVETIR
YSLCTSKLKIKPRDCQIIGDSVITVKPGVSSKTTMYYQLMFLKEAIPRKK
YLLFVEGDNLREVLATKGVKSSLTTSNNTCEVALTLGIEAARSTIMNEIQ
YTMQSHGMSIDRRHITLLADLMTCRGEVLGITRHGLAKMKESVLMLASFE
KXSDHLFDAAYHGQKDAIRGVSECIIMGIPMPVGTGLMKLLYKPDKFESP
LQREVLFDSTEFHIPGYET back to topmRNA from alignment at LSalAtl2s1041:91150..95596+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000277-696124 ID=EMLSAT00000000277-696124|Name=EMLSAT00000000277|organism=Lepeophtheirus salmonis|type=mRNA|length=4447bp|location=Sequence derived from alignment at LSalAtl2s1041:91150..95596+ (Lepeophtheirus salmonis)
GTTGCACAGTTAGAACTTGTCCCACTCCAGATATTTATTGCTAGAACTCG
TAGTATTAATGTTGAGCAGTAAGTAAACATACACCGTATACTGTGTACAG
TACACATGATTGCATACATAACACGTACAAATGACGGATCAATGAGTTGT
TGCTGCACGTGGAAATATCAAATATTACAAATATTGATATAATTTATCAA
GATGAAGGAGCAATATCGAGAGACGGATGTGATCCGTAAAATTTCGCACG
TTTGCTTTGGGATGCAAAGTTCCGAAGAAATGGAACAATGCGCCACGATT
CATACAGTTGCTAAAAACTTGTATAATCAAGTGAGTATTTATATTTATTA
ATTATTAATATCAAATTGATATTAATTGATAGTATTGATGTYACTACTTA
GGATTCATCCCGAACCCCAGTGTCGTACGGAGTTTTGGACTATCGTATGG
GCACTTCTCAGCAAGATAAAAATTGTACAACATGCGGGAAAGGCCTTCCA
GATTGCATCGGACATTTTGGATATATCGACCTCGAATTACCTGTATACCA
TGTTGGATTTTTCCGATCTATTATWCAAGTTCTACAGTCCATCTGCAAGT
CATGTTGCCGAATTCTTCTCAAACCAAAATCCGCGAACTCCTTCCTTAAA
AAAATCCGGTCCAAGGATTTAGGCTACTTAACAAAAAAGAAATTGCGTAA
AAAAATCCTCGATGAATGTAAAAAAATGACACATTGCCCATTCTGTCATG
CCCTCAATGGAGTTGTCAAAAAAGCTGGGCTTCTAAAGATCTCTCACGAA
AAATACCGATACATGAAAAAGACGAATCAAATTATCCTTGATACAATCGA
GGAATATGACTTTGCGTCTAAAGACAATAAAGAAATTGAGTCTCTAGTTT
CGAATCATCATGCTCTTGTACATTATTTAAACCCGCTTGAAGTCCTTCAT
ATGTTTGAGCGCATTCGGGATGAGGACATTTCTCTTCTTCTCATGAATTC
TGAATCTGCTCATCCAAAAGATATGATTCTAACACGTATKCCCGTGCCTC
CACTATGTATTCGCCCTTCTGTGATATCRGATCTAAAATCTGGAACAAAT
GAGGATGATGTGACCATGAAGCTAACTGAAATCGTTTTTTTAAATGACGT
TATCATGAAACATCGTCTTTCAGGTGCTACTGCTAAAATGATACAYGATG
ATTGGGACTTTTTACAATTACAATCAGCTCTTCATTTCAACAGTCAGTTA
TCGGGAATTCCAGCGGATAAGGCACCCAAAAAAACTACTCGTGGTTTTGT
TCAGAGGCTTAAAGGAAAACAAGGCCGATTCCGTGGGAATTTATCAGGTA
AAAGAGTAGATTTTTCTAGCCGAACTGTAATATCTCCAGATCCTAATCTA
CGCATTGAACAAGTTGGCGTTCCTATTCATATTGCAAAAATTTTAACGTA
TCCCGAAAGGGTTCATCGAGCAAATTTAGGTCTTATGAGAAAATTAATTA
AAAATGGACCAGATATTCATCCAGGTGCTAATTTCGTCGAACTGAAATCA
AAGGATGGAACCACTATTCGTAAATATCTCAAGTACGGAAAACGTGAAAG
GATTGCACAGGATTTGAAAATTGGGGATTTAGTTGAGCGTCATATGATGG
ATGATGACATCGTACTCTTTAATCGACAACCTTCTCTTCATAGAATTAGT
ATTATGTGCCATCGAGCGAAAATACTTGAACATCGAACTTTTAGATTCAA
TGAATGTGTTTGTACACCCTATAACGCGGATTTTGATGGTGATGAAATGA
ACTTACATTTACCCCAAACTGAAGAAGCACGTGCTGAAGCACTTGTTCTT
ATGGGCAATAAATCTAATCTTGTAACTCCCAGGAATGGAGAACTATTAAT
TGCAGCCACTCAAGATTTTATTACCGGAGCATACTTGCTTACTTCAAAAG
AAACATTCTTAGATCGTGGAAAAGTTTGTCAGATAATATCACAAATTCTT
GCTTCATCTCCGGACGACGATATCAAAATTGATATTCCTCCCCCTGCAAT
TATGAAACCAGTCCAGTTATGGACAGGGAAACAAATATTTAGCTTACTTT
TACGACCAAATAAACAAGTGCGCACAAAGGCTAATCTTTCGGCTAAAGGA
AAAACTTATACAAAGGATGAAGAATTTTGTGTGAATGACTCTTGGGTTTT
AATTAGAAATTCAGAGTTACTCGCTGGAGCAATGGACAAATCTACTGTCG
GATCTGGTACAAAAAGCAGTATATTTTATATATTACTTAGAGATTGGGGC
CAAGATATTGCTTGCACTGCAATGTGGAGACTTTCTCGAATTGCATCTTG
GTTTTTAATGAATAGAGGATTTTCCATCGGAATAGGAGATGTTACTCCTA
GTAAGAGCTTGCTTGATAGTAAAAAAGATCTCGTTGAAAAAGGTTACAAC
CGTTGCGATGAGTACATTAGCCAATTAAATGCTGGAACGTTACAATCTAC
TGCAGGGAATTCTGAGGAAGAAACACTTGAATCACTCATCTTAAAGGAGT
TATCAGCCATTCGAGATAAAGCTGGAAAAGCTTCTTTAACTGCTCTCCAT
AAATCAAATGCACCACTTACAATGGCTCTATGTGGCTCAAAAGGTTCTTT
TATKAATATATCACAAATGATAGCATGTGTTGGCCAACAAGCCATAAGTG
GAAAAAGAATTCCTGATGGTTTCGAGGATAGGTCTRTACCTCATTTTGGT
AGGAAATCAAAAATTCCTGCTGCCAAAGGGTTTGTCGAAAATAGTTTTTA
CTCCGGTCTTACCCCAACTGAATTTTTTTTCCATACCATGGGTGGACGTG
AAGGGTTAGTTGATACTGCTGTTAAAACTGCTGAAACAGGGTATATGCAA
AGAAGACTTGTAAAATCACTTGAGGATCTCGTTCAACATTACGATAATAC
GGTTAGAAATTCAAGTAATGAAGTAATTCAATTCGTATACGGAGGTGATG
GGCTTGATCCCATGATGATGGAAGGTAAAGATAGACCAGTGGATTTTCAG
AGGGTTTTAGATCATATTAAGGCCATTTCTCCATATTCTACTGAAGATCC
TATGGATGCTGAGACTTTAATGTCTGCTACTGATGAGTTAATCAACGATC
TTATAGGCCCAAGTCAAGAATTCAAAGAAGAGCTGAGAAACTTCTTAATA
GAATATTCTAAAAAAGTAGCTAAAGTATGGAAACTATTCAATTTGAATGC
AGGGAAATTTAGACCAGTAGAGAAGCATATTGAGCGACTTACACTATCTC
AGTTGGTTGAATTTGTTGAAAAATGTAAGGAAAAATATATGAAAGCTGCA
ATTGAGCCCGGAACTGCTGTAGGAGCGCTTTGTGCACAGTCCATTGGTGA
ACCTGGCACTCAGATGACTTTGAAAACGTTTCATTTCGCCGGTGTTGCCT
CAATGAACATTACACTTGGTGTACCACGTATTAAGGAAATTATTAATGCT
TCGAAGAAAATTAGTACTCCCATTATCAAGGTTTTTCTCGAGGACGATAC
AGACCCAGAATTTGCAAGAATTGTTAAAGGTCGCATTGAAAAAACCACTC
TGGGAGAAGTTACCGAATATCTGGAGGAAGTATTTTTACCGGATGATTGT
TTGTTGCTTATTAAGTTAGATATAGAACGAATAAAACTACTTAAATTGGA
AATTTCTGTAGAAACCATTCGATATTCCCTGTGTACATCAAAGTTAAAAA
TAAAGCCAAGGGATTGTCAAATCATTGGAGACTCTGTCATAACTGTCAAG
CCTGGAGTAAGTAGTAAAACTACGATGTACTATCAATTAATGTTCCTCAA
AGAAGCTATTCCAAGTGTTGTCATTATTGGACTGCCTACAGTCGAAAGGG
CTATTATTCACATGGATGACTCTTCGAAGGAAAAAAATATCTACTATTTG
TTGAAGGAGACAACTTGAGAGAAGTTTTGGCAACCAAAGGAGTCAAAAGC
TCTCTTACAACATCCAATAACACATGTGAGGTTGCCTTAACGCTTGGAAT
TGAAGCTGCTCGTTCTACTATAATGAACGAAATTCAGTATACCATGCAAA
GTCATGGAATGTCAATCGATCGACGTCACATTACATTACTAGCTGATTTG
ATGACGTGTCGCGGTGAGGTCTTGGGCATTACTCGTCATGGACTTGCCAA
AATGAAGGAATCAGTTCTCATGTTAGCGTCTTTTGAGAAGWCTTCTGATC
ATCTCTTCGATGCTGCCTATCATGGCCAAAAAGACGCTATAAGAGGTGTT
AGTGAGTGCATTATCATGGGGATCCCCATGCCAGTCGGTACTGGATTAAT
GAAATTACTATATAAACCTGACAAATTTGAATCCCCCTTGCAAAGAGAAG
TTTTGTTTGACTCGACTGAATTTCACATTCCTGGCTACGAAACATAA back to top
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