EMLSAT00000000313, EMLSAT00000000313-696160 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000313
Unique NameEMLSAT00000000313-696160
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1046supercontigLSalAtl2s1046:42189..42921 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000313 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000313EMLSAG00000000313-683079Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001435EMLSAE00000001435-710363Lepeophtheirus salmonisexon
EMLSAE00000001436EMLSAE00000001436-710364Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770365auto770365Lepeophtheirus salmonispolypeptide
EMLSAP00000000313EMLSAP00000000313Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000313

>EMLSAP00000000313 ID=EMLSAP00000000313|Name=EMLSAP00000000313|organism=Lepeophtheirus salmonis|type=polypeptide|length=144bp
MDIVKVQNNYIGPTEEDTDDEDSMINSSSDDSILRTRATCFLSSLVPHFW
PCSKSIRDDYEDDISLEDITSYLHPGAHEYVDEDLEELNASILQKTQSLY
ILQDKTSTPDKLFTGVLIASXAIAILVLFIYQNFGSGNLGKRHQ
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mRNA from alignment at LSalAtl2s1046:42189..42921+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000313-696160 ID=EMLSAT00000000313-696160|Name=EMLSAT00000000313|organism=Lepeophtheirus salmonis|type=mRNA|length=733bp|location=Sequence derived from alignment at LSalAtl2s1046:42189..42921+ (Lepeophtheirus salmonis)
AAAATGTCTACCTTGGTTATGTAGATTGCCAACTGAATTTTTTATTGTTA
TTATACACGCACGCACCGGGAGAGAGCTTTTATTTACGCCCCCACCTATT
ACATCATTCCACACAATAATGAATAATGTTTTTTATTTTTCAAATAATTT
TATAATATCCTTTGACTAAACTTCAGGNAACGTGCGCTTCAGTAATGTGG
AATCAATGGATATCGTCAAGGTACAAAATAACTATATTGGTCCAACAGAA
GAGGATACGGACGATGAGGATTCGATGATAAATAGTTCCTCAGATGATTC
CATCCTAAGTAAGTCCTTGACTTCATATTATAATCCTCATCAATTTCTCT
TAATAATGTCTAGGAACAAGAGCGACATGTTTTCTCTCATCTCTAGTCCC
TCATTTCTGGCCCTGCTCCAAATCTATAAGAGATGACTACGAGGATGACA
TTTCTCTGGAGGATATCACATCTTATCTCCATCCAGGAGCTCATGAATAC
GTAGATGAGGATTTAGAGGAACTCAACGCCTCAATCCTACAGAAAACTCA
GAGTCTATACATTCTTCAAGATAAAACATCCACCCCAGACAAACTCTTTA
CTGGAGTTCTCATTGCCTCAKCAGCCATTGCTATTCTTGTACTTTTCATT
TATCAAAACTTTGGTTCAGGGAACCTTGGAAAAAGACATCAGTGAAGTGA
AGAGGTTTTCTTTTTTTTTTTTTTAGATTCAAA
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