EMLSAT00000000330, EMLSAT00000000330-696177 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000330
Unique NameEMLSAT00000000330-696177
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s104supercontigLSalAtl2s104:449607..454392 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000330 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000330EMLSAG00000000330-683096Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001544EMLSAE00000001544-710472Lepeophtheirus salmonisexon
EMLSAE00000001545EMLSAE00000001545-710473Lepeophtheirus salmonisexon
EMLSAE00000001546EMLSAE00000001546-710474Lepeophtheirus salmonisexon
EMLSAE00000001547EMLSAE00000001547-710475Lepeophtheirus salmonisexon
EMLSAE00000001548EMLSAE00000001548-710476Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777787auto777787Lepeophtheirus salmonispolypeptide
EMLSAP00000000330EMLSAP00000000330Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000330

>EMLSAP00000000330 ID=EMLSAP00000000330|Name=EMLSAP00000000330|organism=Lepeophtheirus salmonis|type=polypeptide|length=582bp
MGSNKDEELSERLRCLLHDSLVGPNEDEYEWITEHVRGMIEEGRGECIFD
LGVGSDSQGDERVGLDSAEYDASKATLESIVQSLHAELVLLRDRLILKTK
RTSQFLIRKHADGKDFMEIRVAVVGNVDAGKSTLLGVLTHGELDNGRGFA
RQKLFRHKHEQESGRTSSVGNDILGFDSIGNVVNKPDHGNLDWVRVCEES
SKVITFIDLAGHERYLKTTVFGMTGHAPDFGMLMIGANAGIVGMTKEHLG
LALALSVPVFVVVTKIDMCPPNVLQDTLKLLVRILKSPGCRKFPVLVKSS
DDVVLSATKFVSERLCPIFQVSNVSGENLELLKMFMNLLSTRSPNTDKEP
AEFQIDDTYSVPGVGTVVSGTNLVGTIRVNDNLLLGPDPLGNFTSIAVKS
IHRKRMPVTEVRSGQTASFALKKIKRSAIRKGMVMLAPSLEPQSCWDFEG
DIMVLHHPTTIAARYQAMVHCGSIRQTASITKMSVDCLRTGDKASVHFKF
VKHPEFLKVGNRLVFREGRTKAVGTVTKVIPYTSTAAMISKNKPVKMIRN
EQRGERNRNQQNTATTTSGTLNKVSAEITAKS
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mRNA from alignment at LSalAtl2s104:449607..454392+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000330-696177 ID=EMLSAT00000000330-696177|Name=EMLSAT00000000330|organism=Lepeophtheirus salmonis|type=mRNA|length=4786bp|location=Sequence derived from alignment at LSalAtl2s104:449607..454392+ (Lepeophtheirus salmonis)
TAAAAAGAAACAGAAGAAATATGTACAGCGGAGAGGAAGAGGAGTTCTGC
TTCTTGATTGACGCTAGGGAAAAACAGTGCGTGTGATTGGAGAGAGAGGA
ACTTGAAGGGAATGAGTCAACTAAGTAATAAGATTGTGTGATGTAAAATG
GTGTAATTGTGATTTGAAGTCATGGAAAAAAAGTATAGGAAGTAAAAGGA
GTTAGTAGGGATGATGACGTGAATCGGTTTTGGCAATCACATATTTCAAT
AGAATTTATATTTGATTTGTAGTTCGTAAGTAGTAAGTAAATATCATGGG
TTCGAACAAAGATGAGGAACTGTCAGAGAGGCTGAGATGTCTTCTTCATG
ACTCTCTAGTGGGTCCCAATGAAGATGAATATGAATGGATCACGGAACAT
GTTCGTGGTATGATTGAGGAGGGGAGAGGGGAATGTATATTTGATCTCGG
AGTGGGATCCGACTCCCAAGGAGACGAAAGGTGCATTTCCTGTCAAATAC
CATGTTCTGATTACCTTAACTTCCTTCCTTTTTCCCAAGGGTTGGACTGG
ACTCCGCGGAATACGATGCCTCCAAGGCTACGTTGGAGTCGATCGTTCAA
TCCCTACACGCCGAACTCGTGCTCCTTCGTGATCGTTTGATATTGAAGAC
GAAACGAACAAGTCAGTTCCTGATTCGGAAGCATGCGGACGGAAAGGATT
TCATGGAGATCCGCGTGGCAGTGGTGGGGAATGTGGATGCGGGGAAAAGT
ACTCTCCTTGGAGTTCTAACTCACGGAGAACTCGACAATGGAAGAGGATT
TGCTCGTCAAAAACTCTTTCGTCACAAGCATGAGCAAGAGTCAGGACGAA
CGTCCTCTGTGGGCAACGATATTTTGGGCTTTGACTCCATAGGAAATGTC
GTGAATAAACCAGACCATGGAAATCTGGATTGGGTCCGCGTCTGTGAAGA
ATCTTCCAAAGTTATTACTTTTATAGACTTGGCAGGMCACGAACGCTATC
TAAAAACAACCGTGTTTGGCATGACAGGACATGCCCCGGATTTTGGAATG
TTAATGATTGGAGCCAATGCTGGTATTGTGGGCATGACTAAGGAACATTT
AGGATTAGCCCTTGCTCTTAGTGTTCCTGTTTTTGTTGTTGTTACAAAAA
TTGACATGTGTCCACCTAATGTACTTCAGGATACTTTGAAGCTCTTGGTT
CGTATCCTAAAATCACCGGGATGCAGAAAGTTTCCTGTTCTTGTTAAATC
CAGTGATGATGTTGTACTTTCAGCGACTAAATTTGTTTCCGAACGACTAT
GTCCCATATTTCAAGTAATTAATGAGTTATTCATATTAGGATACCTGATT
TTTTTTATTATTATTATCATTCCTAGCTGAGCAATATTATTGACGTATTT
TCTTTATTTTAAGGTCTCAAATGTTTCAGGCGAAAATCTCGAACTACTTA
AGATGTTCATGAATTTATTGAGCACTCGTAGTCCCAATACTGATAARGAA
CCAGCAGAATTTCAAATTGATGATACTTACTCCGTACCCGGTGTTGGTAC
AGTTGTTTCGGGTAATAATATCTAACATGATCTACGAATGTCATATTAAT
ATACAAAATTAACCCACTAAAAAATTGGTAGGTACAAATCTCGTCGGAAC
GATAAGAGTAAACGATAATCTGTTACTGGGACCAGACCCTTTGGGCAATT
TTACTTCTATTGCCGTCAAGAGTATCCACAGAAAGCGAATGCCGGTCACT
GAAGTTCGAAGTGGTCAAACAGCATCCTTCGCACTTAAAAAAATAAAGAG
ATCGGCAATACGGAAAGGCATGGTAATGCTGGCCCCCTCTTTGGAACCAC
AGTCCTGTTGGGATTTCGAAGGGGATATCATGGTKCTTCATCATCCCACA
ACCATTGCTGCCAGATATCAAGCCATGGTTCACTGTGGATCCATTCGGCA
GACAGTAATATATAAGTTGATTGTATTAGTCATTGAGTTATTTACTTTCA
TACTCTTGTTAAGGCATCCATTACAAAGATGAGTGTGGATTGTCTCAGAA
CTGGTGACAAGGCATCGGTTCACTTTAAGTTCGTCAAACATCCTGAATTT
CTCAAAGTTGGGAATAGATTAGTGTTTCGGGAAGGGAGAACAAAGGCTGT
GGGAACTGTTACTAAAGTTATTCCGTACACCTCAACTGCAGCAATGATTT
CAAAAAACAAACCAGTAAAAATGATACGGAACGAACAGCGAGGGGAAAGA
AATAGGAATCAACAGAACACAGCTACCACAACATCGGGAACCCTCAATAA
AGTTTCGGCAGAAATAACGGCCAAGTCGTAAGTTGTATTTGTGGTTTCCT
AATTTTAACCTCTAACTCAATTTATAAAATATTATAAATTATGTAATAAG
GAAAGAAAATAAAAAACTCAAAAAGACTGAGGTGTAGTAGTGATTACTTA
GCCATAGAGGCCGTACTTTTATTCTTTTAGTATTTCACAAAGCTTGATTA
TCTTCTTTTTTTTTTTAGTATCCGTAAGTCTAATAAAATAATGAATGGGG
ATGAGTAGAGTTAGTTATTTAATTTATCAACCATCAAGCTGGCCTGACTG
GAGTGCTTGTTGATAAGATCTCTCCTCTCCTTTTTCTGGCTCAAGCTTAA
TGAGGTCATCAATACGAAGAATAGTGATTGCAGCCTCAGTGGCGAATTTT
AAACTCTTGATTTTGCTGATACTGGGTTCAAATACACCAGCCTTTTTGTT
ATCTAAAACAACACCATTGTATAAGTCCAATCCGTAATCTTTAAGAGCAA
TGTGCTCTGGTTTAGTTTGACTTGAGTCATGATAGGATCTCAATTTTGCA
ACCAAATCAGATGCATCTTGAGCTGCATTTACAGCCAAAGTTTTAGGAAT
GACAAGGAGGGATCTTGCAAATTCAGCAATAGCCAATTGTTCCCTACAAG
AGAGAGAAAAGCGTTATTGTTATTATTGAGAAACTAAGTATTTTCATTGT
TTTTATGACTTTACCGAGAAGCAAGAGAGCTAGCAAAATTTTCCAGATAG
ATGGAGAGAGCGGCTTCGACGGCTCCKCCACCGACAACAACGTTCTTGCT
CTCCATAAKTCTCTTAACAACGCAGAGAGCATCGTGAACAGATCTTTCCA
TTTCGTCGAGGTAGAAGTAGTTGGGTCCTCTAAGAATGATTGAGCTGGCG
GTTCTAGCTTTAGTACCCTAAATCATAAAATAAAATTAATACATTCATAA
GACAAATAAATGTTATTACAAATGTGCAAAATTGCTATTGAATTATTTTT
TTGTACATTAACTAAGGATAAATAATAACGTAAGTCAACATATGAGAGGA
AATATTACCTTGATAATAATGAGCTCGTCATCACAGATTCTCTCTTGAGC
TACCTCAGATGCGCCGCCGAGGAAAGAGGCTTCAAATGTTTCTTCACCTT
CCAAATTAGCAAGAGAAGTAACAAACTGTGCCCCAGTAGCTTTAGCAATK
CGCTTGAGATCAKCCTTCTTGCAKCGTCTAKCAGCCATAGCTCCAGCCTC
AGTGAAATATTTAAGACAAAGATCATCAATACCACCAGTTGTTAAAATGA
CATTGGCACCCGCATCAATGATCTTCTTAATTCTTTCCTTTGTGATATCA
GCCTCTCGGTCACGAATGGCTTCAAGTTGCTCAGGATCAGTAACCAGGAC
TTGGATACCCATTTTCAACTTGGTTTTTTGAAGGGAAAAGTCAAGACAAG
CTATCTTTGCATTCTTAATATGTTTGGGCATTTGCTGAGCAGCAACAGTA
CAGTTCAAAGCGTAGCCGTGAATCAATGTACTCTCTCGTGCACTCTTACC
CACGGCTTTAAGAACGTTGACGGCATTGATTGGGTATTTCCCATCAGGCA
TCTTAATTGCGTTTGCAGCGTCAACAACCATGCGACTGAAGAAATCCTTG
TCTGATCCAATGAGTTTGGAGGACATGGACGTCTTGGCGGCGTTGATGAG
CGCTTCCTCTCCCAATGTTTCCACTTCATAAGTCAAATTTTCCTACAAAA
GAAAAAAGAAGAGTGGTTTTGAATTGATTTCTAATGGGGGCCTAAGCAGT
TCAACGCACCTGGATGTACTTGACGGCTTCTTTACATGCCAAACGATAGC
CACTGATGATGGATGTGGGGTGGATCTTTTGTTTGACGAGTTCATCAGCA
TTCTTCAAGAGCTCAGCCGCGATGATCACCACGGACGTGGTTCCATCCCC
CACTTCCTCGTCCTGAAGTTGAGCCAATTCCACTAGGACCTACAGAGTAG
AATGGAGAGGAGACTTATGTGGAATCCAGGGATATCAACAAGATCCACTC
TTACCTTAGCTGAAGGATGCTCCACTTCCAACAACCTGAGAATGGTGGCT
CCGTCATTTGTGATCGTTATGTCTCCAATATCATCCACCATCATTTTGTC
CAAGCCCACAGGACCCAGGGAGGATTTCACAATATTCGAAATGGAGGCGG
CTGCCAAGACATTTTGAGTTCGAACTTCCTGACCAGAGCGACGCTCTCCT
TGGAGACTTAAAGTGCTTGAAACCGTGGACATGGCTCTAGATCCAGATAG
AAAATTAAATTTATTCCTCCCTTTCCACGCACCGCTTTTCAACTCAACCT
CTCTCTAGAACCTTCTAGATTCTTCTTCTTCCTCTCAAAGACACACGGCA
CAGCGCACAGTTCGCTTTCAAACAGCTACCTACTAGTAATAATCAGTAAT
CACTCAAATGAGACCAAAAAGAAAAGAGCAGACAAG
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