EMLSAT00000000338, EMLSAT00000000338-696185 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000338
Unique NameEMLSAT00000000338-696185
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s104supercontigLSalAtl2s104:554871..558592 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000338 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000338EMLSAG00000000338-683104Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001575EMLSAE00000001575-710503Lepeophtheirus salmonisexon
EMLSAE00000001576EMLSAE00000001576-710504Lepeophtheirus salmonisexon
EMLSAE00000001577EMLSAE00000001577-710505Lepeophtheirus salmonisexon
EMLSAE00000001578EMLSAE00000001578-710506Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778549auto778549Lepeophtheirus salmonispolypeptide
EMLSAP00000000338EMLSAP00000000338Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000338

>EMLSAP00000000338 ID=EMLSAP00000000338|Name=EMLSAP00000000338|organism=Lepeophtheirus salmonis|type=polypeptide|length=154bp
MRGFLSLSLLILLGVLTVSGYPNQHQHKRRVAQRYTPTHPFGRIQQFHNG
VVDFRRRRFSSRPRKNRFFGPAPLKNKPFDERRFRHPLSNFRSAPKKVIH
VAKLPLNLRREIKEPSSLKTVPNFYYMKAEDIPGFSRFTLNDVIQPESSF
ATLN
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mRNA from alignment at LSalAtl2s104:554871..558592-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000338-696185 ID=EMLSAT00000000338-696185|Name=EMLSAT00000000338|organism=Lepeophtheirus salmonis|type=mRNA|length=3722bp|location=Sequence derived from alignment at LSalAtl2s104:554871..558592- (Lepeophtheirus salmonis)
ATGAGAGGTTTTTTATCGGTAAGTGAACTCAATACTCATTGCATCTATTT
CCCCTTATCTCTCTGTCAATCTACATAATATTCAATTTAATGGTTTTTTA
CGTAATAAATGGTGAGCTGACATAAAAACAGTCTGGAACCAAAATTAAGA
AACGAAAAATATGTGCCAACAAAGCCCAATATTTCATGTATATATATTGA
TCAGGTATAGGCTTTGTATCTAAATTCATGGGATGAGTTGAATGCTCAAT
AATATTGACTATAGTTTAAAGCTTATATAAAATTAAGAGAGTGCCTTTGA
GCTCCAAATGCACTTTTAAATGAAATCATCGATCAATTTCTCATTTAGTC
ATTGTGACGATAATTTTTGCTTATTAGAGTGCAACTTGCGGCGTCTTCAA
AGGATTAATCCGAGTAGTTTGTTGATGGAAATTGACTATAAATATATACG
AAAAATAACTCTCATGACTCAATTTTAAGATAAGTTGTTCTAGCTTGTTT
TTGTGTTGATCGACCCTAGGCATAAATGTTGACAAGTTTTGGAATAAGAA
GTCACATGGTATACACTGACTTAGTTGTATTACTTTTTGTGAGCTTGTTG
CAATGCTGACCAGGTTTCTACAAATTTATAAATCAAGACTCGATTTTATG
GATATTTGTATACAGATCTCGGAACCCATTCAAAAAATTCTGCACATAAT
ATCAATAATAATAATTTAGAGTGGTATCCGTACTACCAAGGTGCGGCACA
ATATCCTTGATCATTAATGTAAGGTTACTACTTAGTTTTGTAGTGTGCAC
AGAGTACNATATTTAGGTGTGGAATTTTATCTTCATATATGTATGATTTA
TTTTGCCATTTGCGATTTATTACCTATATTCTTTGGAAAGTATAATTGAT
GATTCTTAATCATCTATTTACTATTTTGTTAGGCTCACATCCTTCATATT
TATCAAGAAATTACCATAATAAAAACACCGAAATTTAACTTCCCAGAAGA
ACTTCTATATTATATTATTTTTAAAAATATAACATTTTAATTTTACTTAT
ATTTTCCTAACTTTTCTATTGAAAATTATTAGTTCATTTGATTGGAGCCC
TTAGGGAGTGTATTCTATTAAAGTGTTGCTTCTATAACTAACAATGGACA
TTGATTAAAATATGTATTATAATGTAAAATTGATTGGTTATAAAAATCTT
CCACATGGCCTTTACATGATAATTATTTCTCTTGTATATTCCTAAAATTC
TTCGAGTCCTTGAAATCCTTCGACAGGAAGTATGTGTGTGTGCTTGTTTT
TAACATAATTTTCATATTTCTTTTAAAAGAAAAAAAAACTATGATTAAGA
CCTTCAAAAAACCAAAGGGTTTTTCTTCTGTTGTTTTGAGCATGTTAAGA
AGGCACGATTTCCATATTTATAAAAAAAGGTTTTTTGAAGGATTTTTGGG
CATCCTGCACACATGATAGGCCCAGACTTGGGCCTATGTTATTTAATAAC
CATGATTATAATAAATTTCTCCCCCCCCCCCCCCCAATAAATTGCATGTG
TGAGAAATTCCTTTATAAAGGAAGTGAGATCCTAGGGCATGTAGAAACTT
CATCTATATATTTTATATAAGCATATATCATGACATATTATACATGAAAT
TGACATTCTATTTTTGATGCTACTGAAGTTCCATCAAATACTTATTATAG
GAACAGGATCCATGCTTTATATATAAAGGAGGTCCCTATTTAAGGCAGTT
TCAATCACCACAGATGCCGGATAACATTGTGATTGGAATTATTCTTACTC
TCCGTTTAGTCAAGTATATTTCCCGCATATCGCATTCATTTAATATTAAA
ATTCAAAATAATGAAAAACTAAATCTTATGGTAAACAAGAATTTTTGTAG
TTGTTGATGAGTTCATTCATACTATGCCTATATATTCATATTATAGAAGT
TTATAATTTTGCATAGGGGGGGGGGGGATTGTCCTGTAAGTATTTGATTT
GATACCTAGACTTTTGGCTATTACTTCTTATACAAACTAGCAATTAAAAA
GATTGCTGAATAAATATCGGTAAAGTTCTGATTATTTTAATTTTAAAGTA
TTAAAAYGACCAAATAAAAAATCAAGTAAATACCCAATTCAGATTAAATT
TTGAAACTACTTTACAAGTATGTTGTCTGTCATACATTATTTTATATATA
ATTTATAATTAAAACAATCTTTTGAGTGTCCTAACCTTACTAAAAGAACG
AAAGAAAAATAGTAAAAAGTGCACTTTGAAAAATAATTTCCCCCATTTTT
TCAGATTTTACTGCTAAAAAAAAAGTCCACAAAAAACGCAGAATTAATCA
TATATTATGCAGATTTTTCTTGTTCCCTAAAACTGCGATAAGCTGGGAAA
CCCCTGTAATTATGGTTCAATGATTAAAAATAAGAACGAATGAAATAGTA
TCTAATTTTTCCTCGGGCAAGGCCGATACAAAGTCATTTTATAGATGAAA
TAATGTAGATAACATTTTTTTTTGCACGGATCTATCAAGGCCCCTTTGAT
TTTTCTTATTTTGACGTGTAAACCATTTTTTGTAACCAAACAACTTCATT
TCCAGTTTGTAAATAGCATAAGCAAGATGTAAATTTTTTGTAATAAAAAA
ATATAATGTAGTTATAATTATGAATGAAGAATTTATACTCAACATGTATA
TAAAATAATGTTTTAATTTGATGTTCTTTAGATAGACGATATATTCAGGA
ATTTTATTGTTAATTACGAATTGATAATCACATTATATATAGTTGAAATG
TCCACAGTTATATTACACGTACATACATAAAATGTGAGATATTAATATAG
ACCTAATTAGAACAATAGAAACAATTAATAGAATGTAATTCATATGACGG
TAGTTGCAATGGAAAAAGGGGTAATAGGATGTACAAATTGTAACTTATAC
AATCGGTTTATACAAGTTACAACTTGTACATAATTCCAAATTTGTACGCA
GCATATCTTTAAATTTATATATTTGCATAATTTAAAACTGAATCATATGA
TTGAAACCCTTAGTATTGTATTATTTACTAGTAAATTGCTGTTTTAATAA
CTGATTATACTTTCATAATTAATTTATCTCTTTTTATTACATTTTTTAGT
TATCCCTTTTGATTCTCCTTGGAGTATTGACTGTGTCTGGATATCCGAAT
CAACATCAACATAAGCGACGTGTCGCTCAAAGATACACCCCAACACATCC
TTTCGGACGGATTCAACAATTTCATAACGGAGTCGTTGATTTTAGACGAA
GACGATTCTCCTCACGTCCACGAAAGAATAGATTCTTTGGACCAGCTCCT
CTCAAAAATAAACCATTTGACGAGAGGTAAGTTCCTTGTGATTAACACCT
CAGCCTATAACTAATGATGTTTTTTTTTACTTTTTGATTAGACGATTCCG
ACATCCTTTGTCAAACTTCCGCTCTGCTCCTAAGAAAGTTATTCACGTTG
CCAAATTGCCTCTCAACTTGAGGAGAGAAATCAAGGAGCCCTCAAGCCTC
AAAACTGTTCCTAATTTTTATTATATGAAAGCTGAGGATATTCCAGGATT
CTCTCGATTTACTTTAAACGATGTTATTCAACCTGAAGTAAGACTTGTTA
TACACCTATGGGATCTAATTACTAATTTCATTCTTTTGCTTCTTTCAGAG
TTCCTTTGCCACCTTAAACTAA
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