EMLSAT00000000339, EMLSAT00000000339-696186 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000339
Unique NameEMLSAT00000000339-696186
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s104supercontigLSalAtl2s104:636256..638695 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000339 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000339EMLSAG00000000339-683105Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001579EMLSAE00000001579-710507Lepeophtheirus salmonisexon
EMLSAE00000001580EMLSAE00000001580-710508Lepeophtheirus salmonisexon
EMLSAE00000001581EMLSAE00000001581-710509Lepeophtheirus salmonisexon
EMLSAE00000001582EMLSAE00000001582-710510Lepeophtheirus salmonisexon
EMLSAE00000001583EMLSAE00000001583-710511Lepeophtheirus salmonisexon
EMLSAE00000001584EMLSAE00000001584-710512Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779036auto779036Lepeophtheirus salmonispolypeptide
EMLSAP00000000339EMLSAP00000000339Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000339

>EMLSAP00000000339 ID=EMLSAP00000000339|Name=EMLSAP00000000339|organism=Lepeophtheirus salmonis|type=polypeptide|length=686bp
MADLEMVQAMVMNFRLSELQALMAYAGKSKSGRKSDLQIRALNLIRLNSN
DIKMKIRELNNEMPRPGIGIGNNNKESPLNQLLGERSTRSRKGESDNPSS
NALEEAPVTRRGARSTRTRVSYAEPDEDETSEVLSDSSXDESEESDKGYN
PPSEEEEVVESGGEDTDSAIPLSPSHSPTRLHSKKSANLPNILKKSPRGH
ISNTGSKTIISSLLPTIKTADILVPHTKTVVPIQNSEPKYDIANNGHLMY
PPCPDVQLVSLPFYKVEAILLKPSSLNPSDSARFQVQTFVFHLTPSQANA
IAGSGYRDATGKLEYKNQIQMRFCLNETSCPQDDNFPASICVIVNGRSQA
LPNIIPTNKPGVEPKRPPKPINITSNCKLSATLPNYLNVTWTVEAGKGFC
VAIYYVEKLTSNTLIKILKDKGNRHSAYTKAIIKDKLNDRDCEIATTSCK
VTLACPLGKMRMSLPCRATTCDHLQCFDARLYIQMNERKPKWICPVCNKN
AMYENLMVDGYFFEVLNDPKLGTENEIVLKNDAEWEALPSKDEESSSSSQ
KPKSIQNPIIAPPVNNTSVETVDVYDDEDDEAVKAAKAASLKSATTTNKA
SEDKIVECITLDDSDEESPANPPAKKTRYDNEYAESCIPISSDTGXLXSS
SSFSSNDSNXQPQSLSNQKSINKEPPALXCLSEDED
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mRNA from alignment at LSalAtl2s104:636256..638695-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000339-696186 ID=EMLSAT00000000339-696186|Name=EMLSAT00000000339|organism=Lepeophtheirus salmonis|type=mRNA|length=2440bp|location=Sequence derived from alignment at LSalAtl2s104:636256..638695- (Lepeophtheirus salmonis)
ATGGCTGATCTAGAGATGGTTCAGGCCATGGTGATGAACTTTCGGCTGAG
TGAGCTTCAGGCACTTATGGCTTATGCCGGGAAAAGTAAGTCTGGGCGGA
AAAGCGATTTACAGGTAATAAAACATTATATCCATGATTGGTTTGCACGG
ATTAACATTGTACCATAGATCCGTGCCCTGAATTTGATCCGTCTCAATTC
CAATGACATCAAAATGAAGATTCGTGAGTTGAATAATGAAATGCCTCGTC
CCGGAATTGGGATTGGGAACAACAACAAGGAGAGTCCCTTAAATCAGCTC
TTGGGGGAGAGGAGCACCAGATCCAGGAAAGGAGAGAGCGACAACCCCTC
ATCCAACGCACTCGAAGAAGCTCCTGTGACAAGACGAGGCGCCAGAAGTA
CGAGAACGAGAGTGTCTTATGCGGAACCAGATGAAGACGAAACATCAGAG
GTCCTCTCTGATTCCTCAKCAGATGAGTCGGAAGAGTCAGACAAGGGATA
TAATCCTCCTAGCGAAGAAGAAGAAGTAGTCGAGTCGGGAGGGGAGGATA
CGGACTCAGCAATCCCTCTTTCTCCTTCACACTCACCTACAAGGTTACAT
TCCAAGAAATCTGCAAATCTCCCCAACATACTAAAAAAGTCTCCACGTGG
ACATATATCCAATACAGGGAGTAAAACCATCATCTCCTCATTACTCCCTA
CTATAAAAACTGCGGACATACTTGTACCACATACAAAAACAGTTGTTCCA
ATCCAAAATTCTGAGCCCAAGTGAGTTCTTCCTATAGGAGTTGAAAGACC
CCATTCTCCATTTGGTGATTTATTTTTCAGATATGACATAGCAAATAATG
GTCATTTAATGTATCCTCCTTGTCCGGATGTTCAACTCGTTTCTCTTCCT
TTCTACAAAGTTGAGGCCATACTCCTGAAGCCTTCATCATTAAATCCAAG
TGATAGTGCTAGATTTCAGGTTCAAACTTTTGTATTTCACTTAACTCCTT
CTCAAGCGAATGCCATTGCGGGAAGTGGCTATCGTGATGCAACTGGAAAG
TTAGAGTACAAAAATCAAATTCAAATGCGATTTTGTTTGAATGAAACATC
TTGTCCCCAAGATGATAATTTCCCAGCATCCATTTGTGTTATAGTGAATG
GACGATCCCAAGCTCTCCCAAACATTATTCCTACAAATAAACCGGGTGTT
GAACCTAAAAGACCTCCGAAACCCATAAATATTACGAGTAATTGCAAGTT
AAGTGCTACACTCCCAAACTACTTGAATGTGACGTGGACTGTCGAAGCAG
GAAAGGGTTTTTGTGTAGCTATATACTACGTAGAAAAACTAACATCCAAT
ACTCTCATAAAAATACTGAAAGATAAGGGGAATCGCCACTCCGCGTATAC
GAAAGCTATTATTAAGGACAAACTAAACGATCGGGATTGTGAAATTGCAA
CAACTTCATGCAAAGTGACGCTTGCATGTCCATTAGGTACAGCTCTGTTT
ATTTTCAAAGAGTTTTTTGTATTAAAAATAATGACTAAAATTTTCAGGGA
AAATGCGAATGTCGCTTCCATGCAGGGCAACAACTTGTGATCATCTTCAG
TGTTTTGATGCTCGACTATACATCCAAATGAATGAACGAAAACCTAAATG
GATCTGTCCTGTTTGCAATAAAAACGCAATGTATGAAAATCTTATGGTCG
ACGGATATTTCTTTGAGGTTCAATTTATCTTAGTTGTTGTTGTTTTCTAT
GCATTTAACTTAAGTGATAACCATTTAAAATTAGGTGTTAAACGATCCCA
AACTAGGGACAGAAAATGAAATTGTTTTGAAAAATGATGCGGAGTGGGAG
GCCCTTCCTTCAAAGGATGAAGAGTCTTCATCCAGCTCTCAAAAACCAAA
GTCTATTCAAAATCCAATAATTGCGCCTCCAGTAAATAATACAAGCGTGG
AAACTGTAGATGTCTACGATGATGAAGATGACGAAGCTGTTAAAGCCGCC
AAGGCAGCGTCATTAAAGAGTGCTACTACCACTAATAAAGCGTCTGAAGA
TAAAGTATGTATTATTTATCGTATATCAGAGAGGATTTTGAACTTAACAG
AACCAATTTTATGGTGAACGCCAAAAAATATATTTATATATATCATATAT
ATTTTCAAATTAATCAATTATTTTCATGTCATCTCTTCTAGATCGTAGAA
TGCATCACACTTGACGATTCTGATGAAGAAAGCCCCGCAAATCCTCCTGC
GAAGAAAACACGCTATGATAATGAATATGCAGAGTCTTGTATTCCTATAA
GTAGTGATACAGGAYCATTAYCCTCGTCATCCTCTTTCTCATCCAATGAT
TCAAATKCGCAGCCGCAATCTCTCTCAAATCAAAAGTCTATTAATAAAGA
GCCACCAGCTCTTATKTGTTTGTCTGAAGATGAAGATTGA
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