EMLSAT00000000342, EMLSAT00000000342-696189 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000342
Unique NameEMLSAT00000000342-696189
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s104supercontigLSalAtl2s104:670440..671368 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000342 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000342EMLSAG00000000342-683108Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001594EMLSAE00000001594-710522Lepeophtheirus salmonisexon
EMLSAE00000001595EMLSAE00000001595-710523Lepeophtheirus salmonisexon
EMLSAE00000001596EMLSAE00000001596-710524Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779249auto779249Lepeophtheirus salmonispolypeptide
EMLSAP00000000342EMLSAP00000000342Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000342

>EMLSAP00000000342 ID=EMLSAP00000000342|Name=EMLSAP00000000342|organism=Lepeophtheirus salmonis|type=polypeptide|length=247bp
MKNQLKQMNLYESKGFDSNNLMYYLFSATMGRLNKKLTLTKKANVASSTK
DTKLSMSRIKNMTSLDLITLKKSSKIPQESTDILMLSARKLPEFTIQHNI
KKEKPGVSLSRKMKKSDKMKVRKEFLLNKLSEGAKKMKADRATSFRRKRA
VIGDLDPMKDTLEAIDKVLEKDDSRRNRESKKKLKGKRGTLKQKKRQNEF
IKNASFFEAVKNHPEYAKNPFSTICTHIENKVAAEHLEKVNNCGNEG
back to top

mRNA from alignment at LSalAtl2s104:670440..671368-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000342-696189 ID=EMLSAT00000000342-696189|Name=EMLSAT00000000342|organism=Lepeophtheirus salmonis|type=mRNA|length=929bp|location=Sequence derived from alignment at LSalAtl2s104:670440..671368- (Lepeophtheirus salmonis)
ATGAAGAATCAGCTAAAGCAAATGAATCTATATGAGTAAAAGCATCAAGA
ACCATGATAATTTTAATCTACTGATTGCATTTGTTTCACCACTAGATATT
AATATAGATTTCTCTATAGGTTTCATAATATTTTATTTGAATATAGTTTG
TATAATATAATTTTTATAATATTTTTTTTTTTAAATAGAAGTAAGGTTAA
ATGTTGATAATCAGAATTATTTTTTAGGGATTTGATTCTAATAACTTGAT
GTATTACTTGTTTTCAGCTACGATGGGTCGTCTCAATAAAAAGCTAACCC
TAACTAAAAAGGCCAATGTCGCCTCATCTACTAAAGACACTAAGTTAAGT
ATGTCTCGAATCAAGAACATGACATCTTTAGATCTGATCACCTTAAAAAA
GTCTTCTAAAATTCCTCAAGAGAGTACAGACATTTTAATGCTTAGTGCTA
GGAAATTGCCTGAGTTCACTATTCAACATAATATCAAAAAAGAGAAACCT
GGTGTCTCCTTATCCCGGAAGATGAAAAAATCTGATAAGATGAAGGTTCG
AAAAGAATTCTTACTAAATAAACTATCAGAAGGTGCCAAAAAAATGAAGG
CAGACCGTGCTACTTCGTTTAGGAGGAAAAGAGCTGTTATAGGAGATTTG
GACCCAATGAAAGACACCTTGGAAGCTATTGACAAAGTGTTGGAGAAGGA
TGACTCCCGACGAAATCGAGAGTCAAAAAAGAAGCTCAAGGGGAAAAGAG
GTACCTTAAAGCAGAAAAAGAGACAAAATGAATTTATTAAAAATGCTAGT
TTCTTCGAGGCCGTCAAAAATCATCCAGAGTATGCTAAGAATCCGTTTTC
AACTATATGCACTCATATAGAGAATAAAGTTGCTGCAGAACACTTGGAAA
AAGTTAATAACTGCGGTAATGAAGGATAA
back to top
Add to Basket