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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s104 | supercontig | LSalAtl2s104:677509..684311 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000346 >EMLSAP00000000346 ID=EMLSAP00000000346|Name=EMLSAP00000000346|organism=Lepeophtheirus salmonis|type=polypeptide|length=1054bp
MITRCRHKSKQSHVFKMLGLFLGIGRQRFYHSGELSRMRTYAESVNPKMA
AFIQEKNLWEVIISYVKKQYSIEKSVLFDPNVADSIAAKIAENSRGKKNT
KFIDITSGLGLVSSSMHGLKKYQRIFAAEERLIDALKWTAKDLEGPDGLV
VIKKNLSNDKSLVNFLKTKHIILEDRNWELDYTQITIFGIMSHNCIKRLT
YSLKQYHVALTKNDVVTNLYNFGRPEFFFLISHRTLAHITSKPGQYMMRN
TSNVLSQLLFEIEVVSTYPREAFLPWKNHFNKKTPTYEKLFPELESQFYL
IRLTPRDKLYNIESPSNISYFPFFLRAILGKRRHKVYELIETFIPNISDF
LQEHSGICYNKITGLLTNDEIVKLFNLIVQHPNFHGSTFRGAALHYEEES
TNMDFTPRVMTDVYDAQRKTLLTSGSLKWDNNSSEELKNAXLYYYYYKYL
TFIQLIQPSMATRTSRRGTKEHTPIVTPPSSTGSSRIRSPSPLSPTRVTR
KEEKHQLQQLNNRLAGYIDRVRSLNSHIGSLESKVASIEETKHSEITSIK
FKYDKELGYTRKALDDVAKERAKLQIDAEKLERENRDLRIENSQREKNCN
DLEKQIKALMAKIAALTNDVDDLRRDVNILRPENAKLKKKLEDARKNLEA
ETLQRIDAQNQLQTSQEGLKFDNEVLQTQLNETRRIKAVEISEMDGKYRE
EYDSKLREQLESMRSSYESLMDSNRGDINRKYDADLEKYKRLYAESRSSG
AGQAQELREYQTKISGLVSRNSELEASNSALNTRMSELLREMEDSEACHR
RELAQRDEELRSKDEEMESMLKDYNALMEIKVALDMEIAAYQKLLEGEEA
XLGLSQVESPSSSMVSSSGKFSSFFDSGSGFGKGMKRKRILEEESESYDT
VSDLKGKPSVIIEPLDDDAKGITISNHTDDDISIGGWKLSCIVGSKEEEL
ENGVDTVFKFHRSIVLPTGSSSTVYSSDATDVDHSPPTSLIMKNKSWSKG
EYSVVTLTNKDEEVESIRVTKKIKSYSSKRHDGGGSSSGEIYHHSGDPSK
CSVM back to topmRNA from alignment at LSalAtl2s104:677509..684311+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000346-696193 ID=EMLSAT00000000346-696193|Name=EMLSAT00000000346|organism=Lepeophtheirus salmonis|type=mRNA|length=6803bp|location=Sequence derived from alignment at LSalAtl2s104:677509..684311+ (Lepeophtheirus salmonis)
GTCAATTTACTATATGAAGGAATTCGAGTCTTGAGTTCAAACTGTCTCAT
CCCTCTCAGTATTCATAATAAATAACATATTATTTATGATCACGAGGTGT
AGACACAAATCAAAACAATCTCATGTCTTCAAAATGTTGGGTCTGTTTTT
GGGGATTGGACGACAACGATTCTATCACAGTGGGGAGTTATCAAGGATGA
GAACCTATGCTGAAAGCGTTAATCCAAAAATGGCAGCCTTCATCCAAGAG
AAGAACCTCTGGGAGGTGATAATTAGTTATGTCAAAAAGCAGTACTCCAT
AGAGAAATCCGTTCTTTTTGACCCTAATGTTGGTACATGAATATTGAATA
CATTTATTAAAAAGAAGATATTTGTATCAAAAATGATTTACTATGTTTAA
TTTTTGTTACGTATACTCTTTTTAGCGGACTCGATTGCTGCAAAAATTGC
TGAAAATAGTAGGGGTAAAAAAAACACTAAGTTTATTGATATCACTTCTG
GCTTAGGTCTTGTCTCGTCGTCAATGCACGGTCTCAAAAAGTATCAAAGA
ATTTTTGCGGCAGAGGAGAGACTCATTGATGCCCTGAAATGGACTGCTAA
AGATTTGGAAGGCCCTGATGGTTTGGTCGTGATCAAAAAGAACTTATCAA
ATGATAAAAGTCTTGTCAATTTTTTGAAAACAAAACATATCATACTTGAG
GATAGGAACTGGGAATTGGATTATACGCAAATTACAATATTTGGAATTAT
GTCTCATAACTGCATTAAGAGACTAACATACTCGTGAGAATATGTCTTGT
AGATGCAAACGTTTATATTCACCATATTTATTTATTTTCAGGCTCAAACA
ATATCATGTGGCCCTCACGAAGAACGACGTAGTAACAAATCTCTACAACT
TTGGCCGTCCAGAATTTTTTTTCCTCATATCTCATCGTACTCTAGCTCAT
ATAACCTCCAAACCGGGGCAATATATGATGCGTAATACTTCCAATGTTCT
CTCTCAGCTTTTGTTTGAGATAGAAGTTGTTTCAACATATCCAAGAGAGG
CATTTCTCCCCTGGAAAAATCATTTTAATAAAAAAACTCCAACATATGAA
AAATTATTTCCAGAACTTGAGTCACAATTCTACTTGATACGCCTTACTCC
TAGGGACAAACTCTACAACATAGAGTCTCCCTCCAATATATCATACTTCC
CATTCTTTTTGAGAGCTATTCTTGGAAAGAGACGGCATAAAGTGTATGAA
CTCATTGAAACGTTTATTCCCAATATTTCGGATTTTCTTCAAGAGCACTC
TGGGATTTGCTATAATAAAATAACAGGATTATTAACAAACGATGAAATTG
TCAAGCTATTTAATTTAATTGTGCAACATCCTAACTTTCATGGCTCAACT
TTTCGCGGGGCTGCGTTACACTATGAGGAAGAGTCGACAAATATGGACTT
TACTCCAAGGGTGATGACGGATGTGTATGATGCTCAAAGAAAGACTTTGT
TGACTTCGGGGTCTTTGAAATGGGACAATAATTCTTCTGAGGAATTAAAG
TGATTTTTTATAGGTTTTAAAAATATGTATTCTAAGATTACTATTATTAT
TTATTTCAATTGAATTTACCTACAGAAATGCATNATTATATTATTATTAT
TATAAATACTTGACTTTTATACGTATGCACGTGTACTTGAATAAAGCTAT
ATTTGGTCAATCATTTTTGTACGCGTGCTAAATAATTTTTATTTATTCGT
GAACTAAATGCCATGATGGGGTGAGAGGGAGAATGTACTATAGTTGAAAC
ATGACTGAGTTGAAGAGACAAATTGAATGAAAAACTAAATGTTTTATTAT
TAGAACACTTGAAATTAATAAGTGTCTTTACTTTGTTATTATCATAATAG
CGAACCATAGTTACGTTTCGTAATTTTCAAGGTCGAGTAATTTTCTCATT
TAAAATTAATTATTATGTAATCAATATATATATAGGTAAAAAATCCACTA
TTTTTCTACGAATTCCCTTTGAAGACAAACAAAAAAGGGCTAAAAAAGTA
CTGTCGTGACTCTCTGTACTATGTTTATAGTAAGTAATCATTTTTATAAT
GAAATACAATTCAAACAAAAGTGACTCCATTCTAGAACTAAACCGGGTTA
GGGAGCAGTTCACGTGCGATTTTGTTTGTGTTTGTAGCTTTTAATTTGGG
GCGTGGATGCGTATGTTGTATTGAGTGATTGTTAAGGTAGTTGAAAATAG
ACCAATGACGTAAGTGTATTCATACTATTGCACCTTGCTAGCCCAGCTTG
ATAAACATTCTGGCACCCCTGACCTGGAAGAGAAGAAGAGGTTTTTTTTC
TTTATTTTCAAAAATATGTGAGTGTATTTGTATATTGAACGACTCAGTTG
AGAAGGAGCGTCCTTCGTGTGTGTGTCTGTCAGTGTGGATTATTTTGTTC
CATTATTTTTGGGATTATTGTTCCCTTATTTATTGTGTGAATAATTTTCG
TTATTTTGTGGACGTGACGCGGGGATTCCGAATAATTCCCTTCCGAAAGT
TCCCTACAACTTTTTTGAATTGATTAGCACTGGTAAGTAATTAATATAAG
TGATGTGTGGATGTTATTATTAAATCATGCACTGCCTACCTATGTGGCGA
GTGGAGGMCGGYCCTATGCCKGTGGGGGCTTGAAAAAGAGGTTTTACTTC
TTCTTTGAAGAGGGGATTTACTTGTCCAACAATATACTCTGGCCATGAGG
GGTCCCTCATCTTTGTATATTAAAATATGGTAGCAGATTCTTATAAGACT
GCGGTGACCTTAGGCCGTTCTTGCTTTATATGTGCCTCTGGGATTTTTTA
TTCTTCGTTCTTGTTAAAGAGATAAGAGATTTCTTTTCAAGCTTATCACT
CATATCACTCATATCACTCATATCAAAGGGAGGAGGAGGGAAGAATAATT
GTCGTGTTTATGGGTTTGCCAATATAGGGCTACATCATGCTTCCTTTTTT
GGCATATTTTTGCAAACATGACCGTATACTTTGGGGAGAGGACGCTGCAA
ATAGTCGTCAGGAGTGTTTTGCACAACTCTGCGTCCCTGTGTGACTCATA
CTTTCCCCTCAAGTCCTCTAATATTTTGCGGAAAAAACGAAGAGCAGCTG
TTTGGATACCTTTCATATCTAGTTAGATGGATGCAAGTTTTTTTGTAGGT
TTTTACTTATTCGCTTGACGCTCTACGGAATGTATATTGTGCCATCCTAT
TTGTTATTACTACAAACGCAAAGGTTGCTTTGCGTATGTTATGTAGTCGC
TTAGTTTGCGTACCTACAATATCGCGTGCTCGTAGTAATTTATTCATGGA
TATGCCTTTCCCATTTAGTAAATAGTCAATATGTGGATATAACATGTTCA
ATACTTTTTCATGATGAAGAATAGAGCAAACAAGTAAAAGGAAGAATAAG
TAAATGTGGAAAACAGAAAAACCGATAATAATCAGGTTTAATTGAGTCTT
GTTATAGTAGAAAAACTACTAATGCAAGAGCTTTCTATTTGAGGTACAGC
GTGATGCAATTGTAACATGCGTCTTTCCGACCAAAAGATACTACTACATT
GTAGCCATCTGTGGTTGATAAAGCAAAGTAGTGTTGCTATGTTGTACCAC
AATACTCCTCCATTCATAACATCATAGTATACTAAATACCTCTTGGAAGA
GACATGCTCTGCTCTGCTTGTTTTGTAAGATTCAACGGCCCGTTTCTCCT
TTTCTCTTTCTCCCTCCTTGAGCTTACACATATACACACACTCTCTCTCT
CCTCTCCTCACGAAAGCAATTCATTATTGATGTGATAAGGTATAAACTAC
ATACCTTTCCAATCATGTATTCTTAACTATTGCGAAATTCATTTATTTAT
ATGTCAAGTTCAATTAATATAAAAGTTATCCTTTATTTCACAGATATTCT
TATATAAGAATTAATACAACCAAGTATGGCAACACGAACGTCTCGTCGTG
GAACGAAGGAACACACTCCAATTGTGACTCCKCCTTCATCCACTGGATCT
TCTAGGATTAGGTCTCCCAGTCCTTTGTCTCCAACTCGAGTCACACGTAA
GGAGGAAAAACATCAGCTCCAGCAACTCAACAACAGACTTGCTGGATATA
TTGACAGGGTATGTAGTGATTTAGGGCTGTTTCATGTTAAATGTGATATT
TAATATATTGTTTTTTAAAGGTACGAAGCTTGAATTCTCATATTGGGTCA
TTAGAGTCCAAGGTAGCTTCTATCGAGGAAACGAAACACTCTGAAATAAC
CAGCATAAAATTCAAATATGATAAAGAACTAGGATACACAAGGAAGGCTC
TCGATGATGTCGCTAAGGAAAGGGCTAAATTGCAAATTGATGCAGAAAAA
TTGGAGAGAGAAAATCGGGATCTACGTATCGAAAATTCTCAAAGAGAAAA
AAATTGTAATGATCTCGAAAAACAAATTAAGGCCTTGATGGCTAAAATAG
CTGCAGTGAGTAACTAACACCATTTTGTATACTAAACCGTGTACTAATCT
TTTTTATTTATTGCTAAATTTAGCTCACTAACGATGTTGATGATCTCAGA
CGTGATGTCAATATACTACGTCCTGAAAATGCTAAATTGAAAAAGAAACT
TGAGGATGCACGTAAAAATTTAGAAGCCGAAACACTCCAGCGCATTGATG
CTCAAAATCAACTCCAAACTAGCCAAGAGGGTCTCAAATTTGATAATGAA
GTTCTTCAAACTCAATTGAATGAAACCAGGAGGATTAAGGCCGTTGAAAT
TTCGGAGATGGATGGTAAATACAGAGAAGAATATGATTCTAAACTTAGAG
AACAATTGGAATCGATGAGATCTTCATATGAATCACTTATGGACTCAAAC
CGAGGAGATATTAATCGTAAATACGACGCTGATCTTGAAAAATATAAGAG
GCTTTATGCCGAATCTCGAAGCAGTGGGGCTGGCCAGGCTCAGGAACTTC
GTGAATATCAGACCAAGATTTCAGGTCTTGTCTCTCGTAATTCTGAATTA
GAGGCTTCTAACTCTGCTCTCAATACCAGAATGAGTGAACTCTTGAGAGA
GATGGAAGATTCTGAAGCTTGTCATCGTCGTGAGCTTGCACAACGAGATG
AAGAACTCCGAAGCAAGGATGAGGAGATGGAGAGCATGCTTAAAGATTAC
AATGCTCTCATGGAGATTAAAGTTGCTTTGGATATGGAAATTGCGGCCTA
TCAAAAACTCTTGGAAGGAGAAGAGGCTCSTCTTGGTTTATCTCAAGTTG
AGTCACCTTCTTCATCAATGGTTTCCTCTTCCGGAAAATTTTCTTCTTTT
TTTGACTCAGGAAGTGGATTTGGAAAGGGGATGAAGAGAAAACGTATTTT
GGAAGAAGAGTCTGAAAGCTATGACACTGTTTCGGATTTGAAGGGCAAAC
CCAGTGTTATCATTGAGCCCTTGGATGATGATGCTAAAGGAATCACTATT
TCAAATCATACTGATGATGATATTAGTATTGGTGGATGGAAGTTATCTTG
TATTGTAGGTAGCAAGGAAGAAGAACTTGAAAACGGAGTAGACACAGTAT
TCAAATTTCACCGCTCTATTGTCCTACCAACTGGCAGTAGTAGCACTGTT
TACTCGTCTGATGCAACAGACGTGGTATGTCATATTTATTATTTGATATG
ACATTAATGTTGACTTAACGTTATTTTTCTTCTTTTTTTTGTAACAGGAT
CATTCTCCCCCAACTTCACTGATCATGAAAAATAAAAGCTGGAGTAAAGG
CGAATACTCAGTTGTAACTCTTACCAACAAGGATGAAGAGGTCGAGTCTA
TCCGTGTTACAAAGAAAATCAAGAGTTACTCCTCAAAGAGACACGATGGT
GGAGGATCATCATCTGGAGAGATCTATCATCATTCTGGAGATCCCTCTAA
GTGCTCCGTAATGTAAAATAATAAAAGCTTCGAACTCTATTAAAAACTCA
GAAAAACTTAGCGATGGTCTATAAATATTAGATCGTAAATCAAAGGCACT
CAAAGTTTTTTTAATTTTTGATTTTCATTTTAAGTATTCTAAATTATCAT
TATTTCAATTTTATTGAAAATTTATAGTGGTGAAAACAAGTACATTGTAT
ATAATAATAAATATTAATTTAAGGAAATGTGGGTTCTTCTTACTTCAAAA
AGCATAATGACCCCTCTAAATTCATTTGTATGGTTATTGTTTTTTTCTCT
TCTTCTTTTTTGACAATTGGGCTATATTTTTTTAACCAAAATTTCTGGAT
TTTCCTAATATACTATGACTCGTGTCATCATGCGGTGTAGACTGAACCAA
TACTCCTCCTTTTCTTCCCACTGTGCTACTATTATTCTACTACTTTCTAC
TTAAATATTACAGTTCCCCTTCAATGTATTCAATACACTGCTGAAGGCTC
CGAAACAAACAAACAAAAACCAATTTTATTAAAACCTCTATTTTTGCTTT
TTTTTAATAAAAAAAAGAATCATTTGTAATTATATTTATATAATATTTGT
ATACGTATAACAATAATGAAGATGTATTTATATTTATATTAATGCGCTTT
GTATATGGACGTACCCAATGCTGTCTCTATTTTTAATGTGAGATCCATGG
TTAAAACCCGGTTAAAATCGTCATCAGAATCATCAATGTTGACACTATTG
TGGCCATTCTTGTGCTTCTAATATGTCTACTGCTATCTCTGCTGCTTCTA
TGTTAAACATTAAATAATATGAACAAATACACACTCGGTTTATCGTACAT
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