EMLSAT00000000348, EMLSAT00000000348-696195 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000348
Unique NameEMLSAT00000000348-696195
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s104supercontigLSalAtl2s104:815601..816421 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000348 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000348EMLSAG00000000348-683114Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001617EMLSAE00000001617-710545Lepeophtheirus salmonisexon
EMLSAE00000001618EMLSAE00000001618-710546Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779821auto779821Lepeophtheirus salmonispolypeptide
EMLSAP00000000348EMLSAP00000000348Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000348

>EMLSAP00000000348 ID=EMLSAP00000000348|Name=EMLSAP00000000348|organism=Lepeophtheirus salmonis|type=polypeptide|length=232bp
MSXSPQXVSXEEASTSRLNANPKDRDLTHIVPLQSRCSYHPCFCEENVWK
VVDEXRSRAPGELSKTSVIFVSNKKQVVPLWRQKAGREDDKLVIWDYHVI
FIYKPDERCLVYDLDSELPFPTYFHKYVTETFRTDAILNPEYHRFFRIIP
GGVFLEHFASDRRHMKKSDGTWVKDPPPYPCILPSRDRNDDDKTPSSVTH
NLDKYISMEQSNDDRFGQVLGLQDFIKKFFSR
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mRNA from alignment at LSalAtl2s104:815601..816421-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000348-696195 ID=EMLSAT00000000348-696195|Name=EMLSAT00000000348|organism=Lepeophtheirus salmonis|type=mRNA|length=821bp|location=Sequence derived from alignment at LSalAtl2s104:815601..816421- (Lepeophtheirus salmonis)
ATGAGTYCAAGCCCTCAARGTGTTAGTSGTGAAGAAGCCTCAACTTCCCG
ATTAAACGGTAGCGGTCCCGTGGTGCATTCCCTTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GTAGCGGTCCCGTGGTGCATTCCCTTACAGCGAATCCCAAGGATCGTGAT
TTAACCCACATCGTTCCTCTCCAGAGCCGTTGCAGCTATCATCCCTGTTT
CTGTGAGGAGAATGTTTGGAAGGTTGTGGATGAAGKGAGGAGCAGGGCTC
CAGGGGAACTAAGTAAGACGAGTGTGATCTTTGTATCGAATAAGAAGCAA
GTGGTTCCCCTATGGAGGCAAAAAGCTGGCCGAGAAGATGACAAATTGGT
CATTTGGGATTATCATGTCATATTCATTTACAAACCTGACGAGCGTTGCC
TCGTGTATGACTTGGACTCTGAATTGCCCTTCCCCACTTATTTCCATAAA
TATGTCACGGAAACCTTTCGCACGGATGCAATCTTAAATCCGGAGTATCA
TCGGTTCTTCAGAATCATTCCTGGAGGCGTCTTTTTGGAGCATTTTGCAT
CGGATCGAAGACATATGAAGAAATCTGACGGAACCTGGGTCAAGGATCCT
CCACCTTATCCCTGTATATTACCTTCCCGTGACCGCAACGACGATGACAA
AACCCCTTCTTCTGTGACTCATAATCTAGATAAATATATTTCAATGGAAC
AATCCAATGACGATCGATTTGGTCAAGTCTTGGGTCTTCAGGACTTTATT
AAGAAATTCTTTTCTCGTTGA
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