EMLSAT00000000368, EMLSAT00000000368-696215 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000000368
Unique Name	EMLSAT00000000368-696215
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1055	supercontig	LSalAtl2s1055:34197..38562 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000000368 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000000368	EMLSAG00000000368-683134	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000001685	EMLSAE00000001685-710613	Lepeophtheirus salmonis	exon
EMLSAE00000001686	EMLSAE00000001686-710614	Lepeophtheirus salmonis	exon
EMLSAE00000001687	EMLSAE00000001687-710615	Lepeophtheirus salmonis	exon
EMLSAE00000001688	EMLSAE00000001688-710616	Lepeophtheirus salmonis	exon
EMLSAE00000001689	EMLSAE00000001689-710617	Lepeophtheirus salmonis	exon
EMLSAE00000001690	EMLSAE00000001690-710618	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto770039	auto770039	Lepeophtheirus salmonis	polypeptide
EMLSAP00000000368	EMLSAP00000000368	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1055:34197..38562-

protein sequence of EMLSAP00000000368

>EMLSAP00000000368 ID=EMLSAP00000000368|Name=EMLSAP00000000368|organism=Lepeophtheirus salmonis|type=polypeptide|length=589bp
SVFFSFDTTCICCLLSSSSLCSTINSSFSYGIINRNKMSEAENGFMQPNP
ALFDLEERRKKKNSLAHELGEGSSCRICLGKCPGFQLHYWRKVCSNCRCG
KAEHDVRDSEIDPGCYFVGKIFDRPLRSLKEELEFCYGRFSPNEELKRGS
RLNGNDSGNESIKTDDEDDEAKRRLKGGNGVPNKKVTLDWVPPNVSGSRT
LITKYLKSLPYVPISGSSGAIQRRQQLQKQFPVHDIEPDKCHNLTAGEID
SMANYLLHVKENNVGQGMVLEIPDEDFPPPPPPLENLCISDEAPDYLPPP
PPSLLEDSDNSNPLDTTPGISPGEAPKKDDINQVSSPLKKLSKGPIIPPK
NGNLGEYLNTDFPVHQSKGKESSPLVKDDSPSNLPLIVKGKCDGCKMVFL
PGDVVIRAERATDGQLWHPSCFKCSACKELLVDLLYYYDEGKLYCGRDFA
VIVSKIPRCAACDELIFATEYTGAEEKVFHLRHFCCYECDRPLAGHKYIS
VESQPHCFICYQAKHGKVCKTCNEYINPGDQRLSLDTDHWHATHECFCCG
VCGKSLVGEKMTRKDGYILCSSICRVKLIESMVKRGVVV

mRNA from alignment at LSalAtl2s1055:34197..38562-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000000368-696215 ID=EMLSAT00000000368-696215|Name=EMLSAT00000000368|organism=Lepeophtheirus salmonis|type=mRNA|length=4366bp|location=Sequence derived from alignment at LSalAtl2s1055:34197..38562- (Lepeophtheirus salmonis)
AGTGTGTTTTTTTCTTTTGATACTACTTGTATTTGTTGTCTGTTGAGCTC
CTCATCCCTTTGCTCCACTATCAATTCTTCATTGTAGGTAAGTTTTCCTT
TCCTTATCAACAGTTTGTACATTATTGTAAAATTATCATTTTTATTACAA
ATTACGTCATTCCAAGTCGGAGACTGATTCATAAAGACGAAGCTCTTTAA
CGGGAACACAAAGTTTTATCTTCCTCTTTTCTATGTTTTTTCTTTTTCTT
TTGGTTAAATTAATGAGACGAATGTATGTACATAAATTTTTCTCGACGTC
TGAATGAGTCATTTATGTGGATTTTTTTTTTTTGTTATCAGGAAAGTAAC
ACTGGGGACACCCCATAGATACAGCCTATGTACTCAATCTCTTTTTGTTG
TAGTACATATTTTTCCTCTGTACTTACATTTTTCTTCAAGTGAGTAACAC
TTTAGAAAGGAATAATCAATAGTATCCTTAGTTCTTGGATGTTATTCGTA
TAAAGGTCAGGAGGCTCTGAGTTCCCTTCCACCTKCCCCTCTCCTCTCCT
CTCCTCTAGTGCTCCCTCCCCCTCCCATAAAAGAAAAAGCAAAGGATTTG
TATTTTCTATATTGTACATACATTCAAACCATACCTATAGATGAAGGAGC
TTTTCTACATTCGAACTTTCTTTTTCAGCTCATATGGAATCATCAACAGA
AATAAAATGAGTGAGGCAGAGAATGGATTTATGCAGCCGAATCCGGCTTT
GTTCGATTTGGAGGAACGCCGAAAAAAGAAGAATTCCTTAGCTCATGAGC
TAGGAGAAGGATCCTCCTGTCGTATATGTCTGGGGAAATGTCCAGGATTT
CAATTACATTATTGGAGGTAGGACACAAAAAACAGCAAAGAGTAATACTC
CTATCAGTGCCAATAGTGTCATTGAGTTTAAAGTCTTCAATCAATGTTGA
TACATACGTATATAATTTATTTGCCATTGTCCTTCTGTGATGCCTTATGT
GCATAATGTACATTTATGGACACACAATAGCTTACGAGGCAGCACATAAA
TGCTCTACTTAATGTAAAACTAAGTACACATACATGTATTAACGTTTACC
TATTCTAATGAAAGAAAGTGAAACAACATGGAAGTCACTAATAACTCTGT
TTTTCCATCTTTATATAATGCTTTACCTTTTTTTAACTTTATTAAATCAC
TCGTTTCCCGGATGTATGCTGTGCCGTGACAAAAACCATTACACACGACA
ACCACAGCATATCTGTGGTTGGATTTATCATGTGGCAATGGTGTCAAAAG
TGGGGTCTGACTCAACAATTATAATTAGTTCATTATCGTTGTTACGAACC
AAAAATAGTGATCTGATTTGCTATACTGATTTAATTCTGATTGATTGTTG
CTCAATGATAAAGCGTGTGTGTTTGTGGCTTATACGAGATCTTTGCATGC
TCCATTTCTGGAAAAGACCTGTCAAAATATTAACAAGATGATTGACCTAG
ATATAATTTTTACTCATGGGTTATTTATGTACTACATATATGAATAAAAT
CTGTTCATCATTAATCTTTGTGCATTATTTTTGCACTTGAACATTTTTAT
AAGTTAGTTTTGTTTAATAGGTACGGTTATATGTATATAATATAGAATCA
TTATTTCAACGTTTAAATATAAACGGATTTAATGGTTCATCATTTATATA
TTATCATTGATTGATCTGAATGGGGTTTCACCTTTAACAGTTGAGGAGGT
GTCATTCGGATTTTTTTAGGAATATAATAGATCGGTTTTTTTCCCTTATC
TTTTAATTCAAGTCAATATAATCTTTAAAAAAACTTTCGGCTGCTTCGAA
AAAAGTATTTATACACAATGGGAAGATATAAATTTCTTTCATAGTGTGTG
CATGCACAGAAGAAATATGTAAACCGTTTATGGAAAGAAACTGCAGATTT
TTTCACACTTTATATATACGAATATATATATATATATTATTTTTTTTTTG
TCAATAGAGAAAAGTTAAAAGCTTATTATTCTTACTCTTGCAAATTATGA
GAAGCTATTATTCCTAGTTTCAGTAGAGGTTACTGATTAAATTATCAATA
ATTAAGCGACGCTTCCATTTTTTCAGAAAGGTGTGCTCCAATTGTCGGTG
TGGAAAGGCGGAGCATGATGTGAGAGACTCTGAAATCGATCCTGGATGCT
ATTTTGTGGGCAAAATATTCGATAGACCTTTGAGGAGTCTTAAAGAAGAG
CTCGAGTTCTGTTATGGTAGATTCTCACCGAATGAAGAGCTGAAGCGTGG
TTCTCGTCTAAATGGAAATGACTCTGGAAATGAGTCTATCAAAACAGATG
ATGAGGATGACGAAGCAAAGAGACGTCTGAAAGGAGGGAATGGAGTACCT
AATAAAAAGGTCACCTTGGATTGGGTACCTCCAAATGTATCTGGATCTCG
AACTCTTATTACTAAGTACCTGAAAAGTCTACCCTATGTTCCCATTTCTG
GTAGTTCTGGAGCCATTCAGAGAAGGCAACAGCTACAAAAACAATTCCCA
GTTCATGATATTGAACCCGATAAGTGTCATAATTTAACTGCCGGAGAAAT
CGACTCGTAAGTATCATTTTAAATAGCAACAGCAAATCCTTTCTTCATTT
TCATCTTTCAGAATGGCCAATTACTTATTACACGTGAAAGAAAACAATGT
TGGTCAGGGTATGGTGTTGGAAATCCCTGATGAGGACTTCCCACCACCCC
CTCCTCCATTGGAAAACTTATGCATATCTGACGAAGCTCCAGATTATCTT
CCCCCTCCTCCTCCCTCTCTCCTGGAAGATTCCGATAATTCCAATCCCCT
TGATACCACTCCAGGAATTAGTCCAGGTGAAGCACCTAAGAAGGATGACA
TCAACCAAGTTTCTTCACCTCTCAAAAAACTATCAAAGGGTCCAATAATA
CCTCCTAAGAATGGGAACTTGGGCGAATACCTCAATACAGACTTCCCAGT
ACATCAGTCAAAGGGAAAAGAGTCGTCACCTTTAGTAAAAGATGACTCTC
CTTCAAATCTTCCTCTCATCGTAAAAGGAAAGTGTGATGGGTGTAAGATG
GTGTTTCTTCCTGGTGACGTTGTTATTAGAGCAGAAAGAGCTACCGATGG
TCAATTATGGCATCCAAGTTGCTTCAAATGTTCTGCATGCAAGGTACGTA
TACATTTCANTTAAATATGTATTAAGATATTTTATTTTCTTTGAATCATG
GGATTATTTGATTAATTGCGAAGTTTATTTTTATCATTCTTTTTAACTTA
AAGTGACGTCGTTCAAATTTTTTATTTATCAATTACATACCTTTTCAAAA
ATGTTCATTGTTGTCTTTGTCTTTACCGAATTTTATTTACTATGTCATAC
ACGTCATTTTTATGAAGGATTTACTTAGTTACCTATTTAATAAGTAAACA
TTTTTAAAAGGTAATTATAATTAAAAATGCTGAAGAAGAATTAAGTGTAC
ATATTTATGGATCTAGCGATAAACAAATTGTTCTTCTTAGTGAATGTAGT
TGTGAATATAAATAATGTAATTGAAGTCTGCTTATCATTATTTTAGCGAC
AGGTAAAATGATGAACCATGACTTATTGTTTGGCATTTATTTACGTTAAA
AGTAATTATTCAAGGCAGAAAATAACATATCTTTGATATTATATTTGATA
TGTACCTAAGTATGTATGTAATATTGTATTCAAGGCCAATCATTGATGGC
TTGAATACAGTAACAGTAAATTGAACAATAGTTGACCAATAAGTAACGTT
GATTTGTAGGAGCTCCTTGTGGATTTGCTTTATTACTATGATGAAGGGAA
GCTGTACTGTGGACGAGACTTTGCTGTGATTGTATCCAAAATTCCAAGGT
GTGCCGCCTGTGATGAACTAATATTTGCAACTGAGTACACAGGAGCTGAA
GAAAAAGTATTTCATTTGCGGCATTTCTGTTGTTATGAATGCGATCGTCC
ACTTGCTGGTCATAAATATATATCCGTCGAGTCACAGCCCCATTGCTTCA
TTTGCTATCAAGCCAAACATGGAAAGGTTCGTATTTTTTTTATTATAATT
AGATTTTCCAACTTTTACTAATGTTATTATTATTATTATTTTTTCAGGTT
TGCAAGACGTGTAATGAATACATCAATCCTGGAGATCAAAGATTGAGCTT
AGACACGGATCATTGGCATGCCACGCATGAATGTTTCTGTTGTGGTGTGT
GTGGAAAGTCTCTAGTCGGTGAGAAAATGACGCGTAAGGATGGTTATATT
CTTTGTAGCTCAATATGCAGGGTTAAATTGATTGAAAGCATGGTTAAGCG
TGGAGTTGTTGTTTAA

Add to Basket

Search form