EMLSAT00000000399, EMLSAT00000000399-696246 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000399
Unique NameEMLSAT00000000399-696246
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1063supercontigLSalAtl2s1063:80571..81659 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000399 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000399EMLSAG00000000399-683165Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001789EMLSAE00000001789-710717Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771634auto771634Lepeophtheirus salmonispolypeptide
EMLSAP00000000399EMLSAP00000000399Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000399

>EMLSAP00000000399 ID=EMLSAP00000000399|Name=EMLSAP00000000399|organism=Lepeophtheirus salmonis|type=polypeptide|length=362bp
MGPGGSGPMGPGGIGIGPGSQGGMGPGGMGQGNMNSNMGPNGPGNGMMMN
GPMGPNGPMGPPMSISGPMGSSGQMHSPMGVSGPMHSPMGVSGPMHSPMG
ASGPMHSPMGPNGPMHSPMGHSMHSPMPPSSTPGMTISTGPGSGSPHGSH
HGSGPHTPLGPSSGGGNNGPIGVNLGPHSGGNPVCNSGPNGNNSSNNGPN
GLNSNSNSNPPSNSSNHNVPMGPSSHPGVNIPMGPSSNPGMGGGPPPGPP
SHGGPPSHGVPNSSPSPLSMSNDILYPPGQPMVFNPQNPNAPPIYPCGIC
RKEVHDNDQAILCESGCNYWFHRVCTGLTERAFLYLTKEIYAEWVCDTCF
QTKEVPLVKFKP
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mRNA from alignment at LSalAtl2s1063:80571..81659+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000399-696246 ID=EMLSAT00000000399-696246|Name=EMLSAT00000000399|organism=Lepeophtheirus salmonis|type=mRNA|length=1089bp|location=Sequence derived from alignment at LSalAtl2s1063:80571..81659+ (Lepeophtheirus salmonis)
ATGGGTCCTGGAGGATCAGGTCCAATGGGACCTGGAGGAATCGGTATTGG
TCCTGGAAGTCAAGGAGGAATGGGGCCTGGAGGAATGGGTCAAGGAAATA
TGAATTCTAACATGGGTCCTAACGGTCCTGGAAATGGAATGATGATGAAC
GGTCCAATGGGTCCTAATGGTCCTATGGGCCCACCTATGAGTATATCAGG
TCCTATGGGATCAAGTGGTCAAATGCATAGTCCCATGGGTGTTAGCGGTC
CAATGCATAGTCCCATGGGTGTTAGCGGTCCTATGCATAGTCCTATGGGT
GCTAGTGGTCCAATGCATAGTCCCATGGGTCCAAATGGACCAATGCATAG
TCCTATGGGTCATAGTATGCACTCACCAATGCCTCCATCTAGTACTCCCG
GTATGACTATAAGTACTGGTCCAGGATCAGGCAGTCCTCATGGATCTCAT
CACGGAAGTGGCCCTCATACACCTCTTGGTCCCAGTAGCGGCGGTGGAAA
CAACGGTCCCATAGGAGTCAATCTAGGCCCACATAGTGGAGGTAACCCAG
TTTGTAACAGCGGTCCAAACGGAAATAACTCGAGTAATAATGGACCAAAT
GGCCTCAATAGCAACAGTAACAGTAATCCTCCAAGTAACAGCAGTAATCA
CAACGTACCAATGGGACCGTCCTCTCACCCAGGAGTTAACATTCCTATGG
GTCCTTCCTCAAATCCTGGTATGGGTGGAGGTCCTCCCCCTGGGCCTCCA
TCTCATGGAGGTCCCCCTTCGCACGGCGTTCCCAACTCATCACCCAGTCC
CCTTTCCATGTCTAATGATATTCTTTATCCACCAGGACAACCCATGGTCT
TTAATCCTCAGAATCCTAATGCTCCTCCTATCTATCCCTGCGGTATCTGT
CGAAAGGAGGTACATGACAACGATCAAGCCATTTTATGTGAGTCCGGTTG
TAACTACTGGTTTCATCGGGTGTGCACAGGACTTACAGAAAGGGCCTTTC
TATACCTTACAAAAGAAATTTATGCTGAATGGGTATGTGATACTTGTTTT
CAAACTAAGGAGGTTCCTCTCGTTAAATTTAAACCTTGA
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