EMLSAT00000000414, EMLSAT00000000414-696261 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000414
Unique NameEMLSAT00000000414-696261
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1066supercontigLSalAtl2s1066:184635..187941 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000414 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000414EMLSAG00000000414-683180Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001843EMLSAE00000001843-710771Lepeophtheirus salmonisexon
EMLSAE00000001844EMLSAE00000001844-710772Lepeophtheirus salmonisexon
EMLSAE00000001845EMLSAE00000001845-710773Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774089auto774089Lepeophtheirus salmonispolypeptide
EMLSAP00000000414EMLSAP00000000414Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000414

>EMLSAP00000000414 ID=EMLSAP00000000414|Name=EMLSAP00000000414|organism=Lepeophtheirus salmonis|type=polypeptide|length=309bp
DNQSPTSSSNEVFHHSSTQQILGKQKIKLNETFIIRVDNNQNRHFFLPQI
CPQTDNATTNLDEAYLKNVLESSLRSTSSRTLNIILREMRNLDRDREQIL
YGPQIRMIFEKYNVPVLHVLDQLLQRHIAPNEYGFSNYEDILQYLLDLKS
SNYVEGCSSSNHLRTSSRFSMASMSSSLPARLNKTPTLPSFNHPKDYASS
PFDDKTYFFMDRKEAGLLLELGDIIRASPRFNIDNFRYFLQERDHYGNGQ
ISRQHVQQACEMSYLNIGSEPFYQNKTLQRWLEAXXPLGKGNIFLVEKLV
DYLKRSTPF
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mRNA from alignment at LSalAtl2s1066:184635..187941+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000414-696261 ID=EMLSAT00000000414-696261|Name=EMLSAT00000000414|organism=Lepeophtheirus salmonis|type=mRNA|length=3307bp|location=Sequence derived from alignment at LSalAtl2s1066:184635..187941+ (Lepeophtheirus salmonis)
GACAATCAATCACCTACCTCATCTTCAAATGAAGTCTTCCATCATTCAAG
CACACAGCAAATACTAGGGAAGCAAAAAATAAAGCTAAATGAGACTTTTA
TTATTCGAGTGGACAATAATCAAAATCGACATTTCTTCCTTCCGCAGATC
TGTCCTCAGACGGATAATGCCACAACTAATTTGGATGAAGCTTATTTGAA
AAATGTCTTAGAATCGTCTCTCAGATCAACTTCTTCAAGAACTTTAAATA
TTATTTTAAGGGAAATGAGGAATTTGGATCGGGATAGGGAGCAAATTCTC
TATGGTCCTCAAATACGAATGATTTTCGAAAAATATAACGTAATGAAAAA
ACCTCTAAAATTACATATATCTAAAGGGAGGCTTTTCATATACCAATCAT
TAATTTATGTAGGTACCTGTTCTCCACGTTCTTGATCAACTCTTACAAAG
ACATATAGCACCGAATGAATATGGATTTTCAAATTACGAAGACATACTGC
AATATTTACTTGATTTGAAAAGTTCAAATTATGTAGAAGGTTGCTCCTCT
TCGAATCATTTAAGAACTTCAAGTAGATTCAGCATGGCGAGTATGAGTAG
TTCACTTCCAGCTAGACTGAATAAAACACCAACTTTACCTTCATTCAATC
ATCCGAAGGATTATGCATCATCCCCTTTTGACGATAAGTACGTATTTTAG
TTTCAGTTCGTATTTTAAGATATTTAATTATTCAGAAACAAGCCTAGAGT
TCAATAACATTATTACCTGTACTGTATCTCACGACATTTCCTTCAAAAAG
AAGCACAAAAATTCGAACTCAACCAATCAACGTTCAAACACTGATCAAGG
GAAAAGACTGAGAAAATTTGGCAGCTTACAAAAAGTATAGTGTGAATTTT
TATATTGCCATGGTAACACCGTGTCTACTTTCCTTTCAGAAATAACTTGG
AATCAGTTCATAATCAGCTAGGTCGTTTTTAGCCAATCAACGTTCTGAAC
AATAGTAAAAGACATATTAAATAAGTAGAAAATAAACAGCTGATAGATTT
CAACAAATAAATTGTAGATATTTTCGCAGAGTTATCCCAGTAGCATAAAA
TTAGCTATATATTTTATGGTCTGCTGTCAATTTTTCTACTTACTATTTTT
ATTAAGTACTAGCAGGTGTAAACGACATTGCGCAAATTAACAGAAAAAAA
TTTAAGAGTTTTGTTACCCACATTCATGGCCTATTCAATTTGAAAAATTT
TCATTTTTTTTTAATCTTTGAATCTTATGCACAAGTTTAAATTGGGGCAA
ACACAAATACTAAAGGACTTTTTTAAGCAATATTTTTATTACTTCCGCTG
AGATACATAAAGACCATTTTTTATCAGCTCTTGAGCATCCAATGTAAACA
TGATCATGATTTTTTTAATATGACACACTGAACTTTAGCTACTTTACGCT
CGTTGTTACATTAGTATTTTTAGATCATGTAGCCATGCAGTTCTAAGCAG
ACCTGTAAGAAATTTATCATAGAATGCGGGAGTGACTTTTTCTAGTTGCC
AATCTGAACAGGGTGTTTTATTTTCCAAAGTTTTTTTCATTATTATTTCA
TTCTTGTAGAAGAATATATACTTATAGCTGATATAATAAAACTTCATGAC
AGCTAAACTGGTTTCCTCGCAAATATTCTTCAAATTGCTAGGATTATCAC
GTTAATTTTAGATTTATTTCTTTTTTGCATACCAGTAGCGCATATTTTAT
ACATCACTGATCATAGGTCCCACAATAGGAGGAGACATTATCACATCACC
TTTTCAAAGATAATAAAAATGAATTGATTAGCTCTTTGTAATGTCTCCGT
GTGGGGGACAGAGGACGAAAAAGAAGTGTAGTAATCTACGAATAAATGAA
AAATTTGCAAGCTGCTACCAATTGATTTTAGGGCTCTTCTTTCTATTTTT
TCATGGTGGGATATACCAACAATAAAGATAACTACATGATCTATGTAATA
ACTAGAGATAGGGGTTTTGAAATAGTGCGCTGCCTGTTTAATGATTTTTG
AAGGACAAAATGAATTATTGCAAAAATTAGGAGAACTTTCCACATTTAAA
AAAACAAAAATACATTAGGGTAGTGAAAATATTATAATTATACTTAAATT
CATATATATCTATTTTATTTTGTATTTTTAATCTATTTCCGCCCTAATTT
TTAACTATTTGAATTACTTCAAATAGTTACATATTAAGGCTGTAAGCATA
GGTAGACTGGACCTCTTCTTTTAGAGGGAGATGTTAACACACAAACAATT
ATTAAATAACGAAAAAAGGAACAGAATGAGAAAATGCATCAACCGTTTTT
CTTTTTCTAATTACTATACTTAGTTTTTTATTTACACACATCCCCTCTTT
AGTAATAAATTTGCAAGTGTTCTCTCTTTTGTACCATTTTTTTAAGCTAG
ATTTCCTCGAACTACTAAATTTTTCATTCTGTGTCAATTTTATATGTATA
TCATATCAATAGTGATTTTAACTTTGGTTATTATAGGACCTACTTTTTTA
TGGATCGGAAAGAAGCAGGACTCCTATTGGAATTAGGGGATATTATAAGA
GCAAGCCCAAGATTTAATATAGATAATTTCAGATATTTTTTACAAGAAAG
GGATCACTACGGAAATGGACAAATCTCACGTCAACACGTACAACAAGCAT
GTGAAATGTCTTACCTTAACATAGGCTCTGAGCCTTTTTATCAAAATAAA
ACGCTACAAAGATGGCTAGAGGCTTMTGYTCCTCTTGGTAAAGGAAATAT
TTTCTTAGTTGAAAAATTAGTGGACTATTTGAAGAGAAGTACACCATTTT
GATCCTGGATTCCATGCATGAGAATAATTATAAAAGTTATAAATTCTAAG
CAATGCTGTTATCTTAAAAATAAGACCAAACATTAACATGGTAACACTGA
CAATTTGAGGGAAAAAGAAAAGGGAATTTTTTGAGGAAAAGAGTAGCTTG
GCCGTCATGACCTGTCATTGAATTAGCTGTAAGCAGCTATGAGATGAAGG
AAAGAAACACAAATTACACTCCGTATCTAGCAAGGCTACAAGCAGGAATT
ACTAAAATGTCCATCTTCAATTAGACTCTGAGTCTAACAAAGGCTTATAA
CTCTCAAACAAATCCTCACTGTTACTCTCCGTCTTTCAACAGCACATCAA
CTTTATACTTTGATGTTCTCTCTCAAGAATTAAAGAATAATAATAACCGC
TTAGGAAAATAAGTATAACACACTGTTTATATTCGCAACTATAAAAGTTG
TTTACAC
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