EMLSAT00000000422, EMLSAT00000000422-696269 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000000422
Unique Name	EMLSAT00000000422-696269
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1067	supercontig	LSalAtl2s1067:99048..103528 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000000422 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000000422	EMLSAG00000000422-683188	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000001877	EMLSAE00000001877-710805	Lepeophtheirus salmonis	exon
EMLSAE00000001878	EMLSAE00000001878-710806	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto772109	auto772109	Lepeophtheirus salmonis	polypeptide
EMLSAP00000000422	EMLSAP00000000422	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1067:99048..103528-

protein sequence of EMLSAP00000000422

>EMLSAP00000000422 ID=EMLSAP00000000422|Name=EMLSAP00000000422|organism=Lepeophtheirus salmonis|type=polypeptide|length=437bp
MNINLQAMMFIIMMGLFHFANSKTSVFINPDSPFLVKQTANGEILLRKSP
TFVSSRPTFNALNELLDLYLNNQTFINSRTSTERPPYYPIFSSTTHGPFF
TFSSTDFIFQNIKREKDTSNALRFDLNNDIPSTSSSNLKEIFDSLNTKKQ
TDRIIVDRPDLLTISEFLPGPVIVTNNQDKILDSSDSMNTIIPGATISST
STMTTSTTRRGVISSAFSLAPLIXPDSIEIVPEITTAKTTTTTTTTTTTT
TMMTTTTTEPIITTESSQFGLSSIFSMISHQMEFISNSFLQTKSSTTSSE
SALTQSSTSNNGNGLDASAALIPAVLGGVIGVGLFVSELAKSSSTSASKK
RRRGGGPPRRTYAQTKAVEFLRKQQQEKQDKRHKKPFLPRQRKSSNALRR
SGITQFVASDARRNPMEQGGDNFYYDYFRSDSFVNTN

mRNA from alignment at LSalAtl2s1067:99048..103528-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000000422-696269 ID=EMLSAT00000000422-696269|Name=EMLSAT00000000422|organism=Lepeophtheirus salmonis|type=mRNA|length=4481bp|location=Sequence derived from alignment at LSalAtl2s1067:99048..103528- (Lepeophtheirus salmonis)
ATGAACATCAACTTACAGGCCATGATGTTCATAATAATGATGGGCCTCTT
CCATTTCGCCAACTCCAAAACCTCAGTATTCATAAATCCCGACTCTCCTT
TCCTAGTCAAACAAACTGCAAACGGAGAGATTTTACTAAGAAAATCCCCA
ACATTTGTCTCCTCTCGTCCTACATTCAACGCCTTGAATGAACTTCTAGA
CCTATATCTAAATAATCAAACCTTCATCAACTCCCGAACCTCAACTGAGC
GACCGCCCTATTATCCCATCTTTAGCTCCACAACCCATGGTCCTTTCTTT
ACGTTCTCCTCTACAGATTTTAGTCAGTCTCATAGAAAGGATCCATCATC
TCATGATAAAATCAAAAAGCCTCTTTCAAATATGATCCCGAACAATAATA
ATTATTCGCGCCTAAAGCCCTTTCAAGTCGTTACATTAAGTCCATACAAA
AACATCATTGACAATTCTAGGAATAAATGGCCTCTCTATAATTTGTCATC
GTTTAAAGGAAATAACAAAGTAAGGTTTTAACATTTTTATCCTTGGATTT
ATATTTTATAAATGAATTCTTAAACTCGATTTTTGGGTGAATAATTGAGA
CTTTCAGGAGTGCACTTATATGGATTTTAATAGCAATTCAATTCAATTTC
TTTAAATTTGAAAAATAAATGAGGTTTTATGGGCTCAAATTATGTCGAAA
TGTAACTTTCATTGCAAATATTTAGAATTAAATTATTTTAAAACAGTCTG
AACAATCGTTTTCTTTTTACATTATGTCCGAGGCGTCCAGAATTTTTTTT
ATAAAAACCATGAAATGTACAATTTTTGTGGAAATTGACTTAAACTTAAA
GTAAAATTCTAAATATAAGGGTCATAATGCAGATTATCAATTAATATTAA
AAAAAACACTAAAATCAAAGTTTATCAATAATTTATTCTCATTAATTTAA
AAACAAAGTGGAGAAACTTGCTTGTTAGCTTAAGTAGATTTATGGTTCTA
GTGATACATTTCTTCCATCGTAAGATGTCTTTATTTATAATAGCACAACT
GACGTCACTATATCATTTTATGCCATTTTCCCTTTTGCCGTGTACAACTT
TTCTTCCCTTCTCAGAATTTGCCTTGTTAATTCTGTTAAAAGAAAGAATT
CATGGAATTCATAACTCCGTAGTTTGTACAAAGTAATACTAAACACTCTT
AGTGGACAAAAAAATTGTCCCTAAGAACAAATTCTTTATACAAATATTGA
TCACATGGTATTCCAGAGCCGTCCGCAGGGGCTGTAGACCCCTCCAAATT
AAGATTTTTTTTCATTTTATTATAATTTTTTTTGGTATGTATAAAAAAGT
TATGCTCGAAAATTGAGGTAATTTTTATTTTATGAAATGATTTATTTTCA
TATAAAAATGTAATTCAGCTAAATTATGCAGCAGAGAAAAAAATATAATA
TTAGATTTAATCCTTAAATTTTTGACCGAAAATTTAGTTTTTTTGTCAAC
AGCTGGGAGTTTTTATATTATTTTTCCAAAAGTTTAACTTTTTTTAAAAG
CTATGGAGTTTGAAGTCTTTATCTAAAAGACATTATTTTTTTTGTGAACA
GCTGTCAATTTATTTTTCCGGAAAATTTAATATTTGAAATTTAATTTTTC
AATTTTTTTTTTCAAAATAATTACAAAATCAAGATCCCTCAAAATATAAT
CCTGTAGACGCCCTTATTAGGTACTAATGGGAATACCCAGCATTGCTCGG
AGTTATTTGGCGTTGGCAAAATGATAGACAGACTTTACTTTAATAATATA
GATAGTACGTACTCCCTTTTTCTTTTCTTTTTTAATTCTGAGCTTCAGCT
ACACACGCTCGTTGCTACATTGTTATTTCTTAGATTTTAAAAAAATAACA
CATTTATAAGATATTAAGCAACCACTTAAAAAATGAGCCCTTCACAGACC
AACACACAAACTTTGCTTTATTAGTATAGATTTATAAAAAATAACATCTA
AAGTTAACATTGTTATTAATTAGATCGAGTAGTCACGCAGTTCTAAACTA
TTAGGCAAACACTCAAAAATTAGGATTCGACCAACATTCAGACAAACTTT
TGCTTTATTAATGTAGATAACATCATGTTTATAGATCAAAACATTTTATT
TCGTCTCTCCTGAACAATTTTTAAATGGCCTGAGAGTACATTTTTCTTCT
AAATAAGGAAGCGTTATGTCTTACAGTTTGATTTTGCCACATGTTCATTT
AATTAAGCAGATACCTTATTATTCCTAATGTTTATTTCATAATTTATGAC
GATTTCCTCTCTCTTCGGTTTTAAGTCATAGGATGAGATAAAAGTATGTA
CTATACACTACGCATATTTAGACATAATTTGTGGTTGGATGATAATATCT
TACAAAAGACTCACTTGTTAATGATTGCATATATTTTTTACTAATTCATG
TAGTGTATAATACATAAATTAGTACAAAATATATGTATAATACATCTTCA
CTGAAGGGTTTTCAGAATCTTTCTTTTTTTAATTTAAAAGGTCACTTGTT
TGGAAAACTGATTGACTACCATTTTGTCACGTAGTCCCCTCTTAGTTCCC
ATTTATCAAAATGGACGTGAAGGATACATTATGCTATGAAGCGTGAAATT
TATAGTCATTCTTTTTATTAATGACATAATTTGASGAGACGAGACAGACT
GTGTGTGTATATATTCCTATGTCGTCATAACAATAACATTCATTTTTATA
CAGCATAAAAAATTGCCATAACCAAAGTAAATAAAAGTATTCAAAATCGT
TCATATTTCAATTTTTCTTTTGTTACACACTTATATATGTGGCCGTCAAC
ATAAAAACAACATAGAATGATTTTACTCAAAATTGAGCGTGGATTACATT
TGTATTCTTAGATGAATTATTCTCTGTTTATATCAAAAAATTATTCATAT
TAACCCTTTTGAGACGCCGTAAATTGCACAGACGTAGGCTAAATGGATCG
TCAAAATAAAAGAATGAGAAATCTTAAAATCAATTAAAAGCTCTAAATTA
TAGCCTAAATTCTTACGTATCTAACTCTTCCAACAAATTTGAAGTCGATC
CCATAATTAACCGAAACTTTCACTTTAAATAGCTCATATTGAGCCTCACG
ATAAACGAATAAGAGATTAATTGATTTGATTTGAAGGCCCATTTGAGGGT
TATTATAACTATTTTAAACTAAAGATAACATTCTTTTCTATTTAACTTAT
ATCACAAACTTGAATACCAAGCCTATAATTGAATCAAATGAAATATTGGG
CTGTATTTATATATATGAAGTAAATAAATAAATTGGGATTTTTTTCAATT
TCTGGACTTTTACTCAAGATTGTTTTATGTTAATGTGCCACATATTTATA
ATTATATTGATTTTTCATTTCTTCCCATTTTATTTTTTAGAATCCATTTA
AAAGTCGACCTGATCAAAGCTCTGACTATTTGAGTTCAGTCTTCCAGAAC
ATAAAGAGAGAGAAGGACACTAGTAATGCTCTGAGATTTGATTTAAATAA
CGACATTCCCTCTACAAGTTCCTCAAACTTAAAGGAAATTTTTGATTCGT
TAAACACCAAGAAACAAACGGACCGCATCATTGTAGATCGACCAGATCTT
CTAACTATTTCTGAATTTCTTCCTGGGCCTGTTATTGTAACCAATAATCA
AGATAAAATCCTAGACAGTTCGGATTCTATGAACACAATTATCCCAGGAG
CAACGATATCAAGTACTTCAACCATGACTACATCAACCACAAGGCGAGGA
GTAATTTCATCGGCGTTTTCTCTGGCTCCACTCATCAYCCCAGATTCTAT
AGAAATTGTACCAGAAATAACAACAGCAAAAACAACTACTACTACCACCA
CAACTACAACAACAACAACAATGATGACGACAACTACAACTGAGCCAATC
ATAACGACCGAATCCTCTCAATTCGGTTTATCTAGTATATTCTCTATGAT
TTCTCATCAAATGGAGTTCATAAGCAATAGCTTCCTTCAAACAAAGAGCT
CAACTACAAGTAGTGAGAGCGCTTTGACTCAAAGCTCTACTTCAAACAAT
GGAAATGGCCTTGATGCTAGTGCTGCTTTAATCCCCGCTGTCTTAGGAGG
AGTAATTGGGGTGGGACTATTTGTGTCTGAGCTGGCAAAAAGTTCATCCA
CTAGCGCATCTAAAAAGCGACGAAGAGGAGGTGGCCCTCCGAGACGAACC
TATGCTCAAACAAAGGCTGTTGAATTTTTGAGGAAACAGCAACAAGAAAA
ACAGGACAAACGACACAAAAAGCCCTTTCTTCCAAGGCAAAGGAAATCTT
CGAATGCTCTAAGGCGCTCTGGGATCACCCAGTTTGTTGCTTCTGATGCA
AGGCGTAATCCTATGGAACAAGGTGGGGATAATTTCTATTATGACTACTT
TAGGTCGGATTCATTCGTGAATACGAATTAG

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