EMLSAT00000000425, EMLSAT00000000425-696272 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000425
Unique NameEMLSAT00000000425-696272
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1068supercontigLSalAtl2s1068:100845..104517 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000425 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000425EMLSAG00000000425-683191Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001885EMLSAE00000001885-710813Lepeophtheirus salmonisexon
EMLSAE00000001886EMLSAE00000001886-710814Lepeophtheirus salmonisexon
EMLSAE00000001887EMLSAE00000001887-710815Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772137auto772137Lepeophtheirus salmonispolypeptide
EMLSAP00000000425EMLSAP00000000425Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000425

>EMLSAP00000000425 ID=EMLSAP00000000425|Name=EMLSAP00000000425|organism=Lepeophtheirus salmonis|type=polypeptide|length=117bp
MVGFWPLSAMLSFRLSLPAMFIPLTMGEREPRAGLVDLGEEYWSIILCAK
FLAFSLSLVGCRHLLFLLQELHVLFHAQQESNNLERTRKLEFTGNEFIDR
RNCFIFVLRNYKESVND
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mRNA from alignment at LSalAtl2s1068:100845..104517+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000425-696272 ID=EMLSAT00000000425-696272|Name=EMLSAT00000000425|organism=Lepeophtheirus salmonis|type=mRNA|length=3673bp|location=Sequence derived from alignment at LSalAtl2s1068:100845..104517+ (Lepeophtheirus salmonis)
ATGGTGGGCTTTTGGCCACTGAGTGCAATGCTCAGCTTCAGACTTTCACT
CCCAGCGATGTTCATTCCACTCACAATGGGGGAACGGGAGCCACGAGCAG
GGCTTGTGGACTTGGGCGAAGAGTATTGGTCCATCATTTTGTGTGTGCGT
CTTTACCCAGACACGGAGTTGTTGTAGTCCTCTTCCACTTCTTCCTCTAG
AATCTCGAGGGTAATGTCGATTTCCGGATTATAAAAGAGAAACACGCGCG
AGAGGAGCAAGGACACAGACACCAACAGAGTTAACTCCCGTCGAACTCGA
TAGCCCAGGTCAAGAAGCTAATAAATAATCATTAGAAATCACAATACTAT
TTTAACATTCACAAATAACAACAATATTTAGAAATTCAGAGCAATACCCG
TAAAAGGGACCGTTGAAATCCTTCTCCTAACCCCAAAGATCCACTCAATA
GCCCATAATTCCTCGGCATCCCATTCGTTCTTGGATTATTAGCAGCGTCT
ATCCTCAAAACCTTGATACTTTCTTTCTTTTGTAACTTAGATTTTAATAA
ATAAAAAATATATAATATTAATAATAATTTTCTGGACAACAAATCGTACG
TACATAGACAAATTTTAGCTGGCTGATATTATTTGAGTGTATTACTCATC
AACAGCTGTAATGACGTCATTACTCTTAAAAAACAATAACAAGGCTAGCC
AGCAACGATTTTCAGTGAGTTCACTCGAAATAAATTAGTTTAACGAATGA
CGGCATTGGGATCCTAAATATTAGAGTATAACGATGGAGAATAATTTAAA
AATCTAAATATAGCGTAAATAAATAAGGATTCAATTGTGGAAAAAATTAA
ATTACTACATTTATTACTTTTTTTGAATTACATTTACCCAAAGAAATGCC
CCCAATGACGTCACCAAAAAGAGAGAGTTAATTAATAAATCTGCTCTGTT
TGCCCTACAATTTCCTTGTTGTTAAAAAAAAACCTTACTCCCCTCTCAAT
TTATTCAACGCCTAATAATGAATAGGGGAAATCGTCAAACTTTATATTTT
CTCAAAATGTTTTCATTTGTGGTCCGTCAACACAAAATCAAGCTGGAATG
ATTTTTCTCAAATTTTGACTGTGGATACAATTTATCGCCAATTTCTATAA
ACAAATTATTCTTATTAACCCTTAGGATGTGTCATAAATTGCACTCTTTC
AAGAAACGCAAATTTATTATCACAATAAAAGAATGCAAAATTAATAGATT
TTATTTAAAAAGGTATATTGGGGCCAATAAAAGTCACTTAAATAAAATAA
AGGTCATAAACTATAGCTTGAATTATTGAGTAGCTTAATTCGCCCTACAA
ATTAGAAGTCAAAGCCTATAATTGACTCAAATATATCTGTTTAATATTGG
ACTTTATATATCGACAATGTAAAAAAAAAATGGACTTTCTCCTCTTCTTG
ATTTAGGTTCAAGATTATTTTATGTTGACACACCACGTGTACAGTTTTCA
TTCGACCCAAAATTAAGCCTAGTTTAATTTATTATCTAGAAATTTTATGT
ATCCGGATTATAAAGTTTAATTTTATGTAATATATATGATTTGCTTGATC
CTGAGAATAAATTTCAGCTTATTAATAAGATTAATTTATATACATTAATA
TCCAAAAAATTCATTAATAATATAGCGGCTGACACATTAACAAATTTAAT
GTGACATTTAATCTCTCCCAGTCTTCCCTACTTGAAAATATTTTCCCCNA
TAAATTATATAAAATATTGATTTTATTAAAATAATAACTAATCATAATTT
ATTATGAGTTTAAACAATAAATTTGCATTATGAAATTATATATATTTATT
TAGCTATGATTCATTATCACACATTTCTTCCTCAATCAAATCATTATCAC
AATTATAGTATAGATGCGCACTTGAATCTTCATTATAATAATCGACGATG
TTYGAGCCTTTACTGAGCCTGATTTTACTTTTTTTAGGCAAAGTTCTTGG
CTTTTTCTTTGTCATTGGTAGGGTGTAGACATCTCCTGTTTCTTTTACAA
GAACTTCATGTTTTGTTTCATGCTCAACAGGAATCAAATAACTTGGAGCG
TACTCGGAGTAAATTTCATTCTGTTCATGCCATTTGAGATGGTTTTTAGG
ATTATTTTTTTTAAAGGATTTGCAGGATTTTGTCTWAAAATCRGGAGAAG
GMAATACAAGMCCCATAGATTCACTATCCGATAAATCTTCAGAAGTGCAG
AGATAAGTTTGACCACTATAGCCACTTGGTAAGATTTCCGAATATTCATC
AACAACTGAGTAATCCTCTTTAGATGTCAACGAATCCCTAAAGTTATAGA
AAACACAACATTTCCATGGGTATTTTAACTCTCAGTACTATTACCTATCC
TTCAACAATTTTTTCTTCCTATCTTTTTTGCTCTTAAACAATTTTGAAAA
CAGTTTGGATAAATTGGAAACTTGTTTGGTAACATCAGATTCTGAACTTG
TTCTTGACTTAATTCTTCCATTTTTTCGAGAAACTGATCGTTTTAAGCTT
AAACTTTTGTTAGCATGGAGTGATAGAGCCTGCAAATTATNATTWTTCTW
CTTGTTAATTAARAAAATTATTATAATCATTCACCCCCCCCCCGTTTGTA
TTTATATGTNGGAGTGATAGAGCCTGCAAATTATCATTATTCTACTTGTT
AATTAAGAAAATTATTATAATCATTTCACCCCCCCCCCCGTTTCGTATTT
ATATMTAATGTACAAGTTACGATTTTGTGCAAGTTCTAATTTCAATTTGT
AAAAGAAAATTGGACTTGTGGTGAGGATAATGCAATAATTGAATATTCCA
TGGATGCTCGATATATTAATGCTGTAATTTTTGATCTTTTTTATGAATAT
TACTTAGTAGTATTCTGTGTCACATTATTAGAATCAAAGCCCCTTAGTTA
TTTTATTATTCGTAAATAAAAAACAACCAAATGGATAAATCCAGGTAGTT
GGTAATTAAAATGAGTGATGATGTAATTAAATAAAGCGTAATAAGACGTA
TAAATTATAACAACTTGTACAAGACATAATATAAATACAATATATGTGGA
AAAGATAGAACGACTTACTTTTGAAGTTGTCTTAATGTGTGTACGAACAT
AATTGTTAAATTCATCCAAATCAAAATCAAAACTATTAAGGATAATTTCC
CCCTTACCAAAGGGGCTCCTACTCCCAAGGCAGAAGAAATAATATTTTCG
CCTGAGAAAATAACAATTTGTTTATTATAGTAGACTAGTTAGGTTGCTCA
GTTTTATTTCATATACTTATTGATTGATCTGATTCCATAGTCTTTTATTA
GAGAACGATCAATGGTCACTCTTTTTTCTTTGGATTCAAATACAAGACTT
TTTAAAAAGGTGGAAACCCTAAATTTATACACTCCTGCAAGCAAATCCCA
CTGATTCTCATAGTCTGAGCCTAACACTTCCACTGTAATGTAGTCTTCAT
TCATGGCTCGACTGATCATTTGAGACAATTAACTATTTATCAGCTTTTAT
ATGAATATACTTAATATATAAATATACTATGTAGAATTGGAGTTCACAGG
AAATGAATTTATTGATAGACGGAATTGTTTTATTTTTGTTTTAAGGAATT
ACAAAGAATCTGTTAATGATTAG
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