EMLSAT00000000521, EMLSAT00000000521-696368 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000521
Unique NameEMLSAT00000000521-696368
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1081supercontigLSalAtl2s1081:161683..162253 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000521 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000521EMLSAG00000000521-683287Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002259EMLSAE00000002259-711187Lepeophtheirus salmonisexon
EMLSAE00000002260EMLSAE00000002260-711188Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773589auto773589Lepeophtheirus salmonispolypeptide
EMLSAP00000000521EMLSAP00000000521Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000521

>EMLSAP00000000521 ID=EMLSAP00000000521|Name=EMLSAP00000000521|organism=Lepeophtheirus salmonis|type=polypeptide|length=118bp
MADIKNLEHPTLKVPYEILNKRFRATQKVLDREVCQITPSLGLEVDLSTN
VSTAMETLTFLEEKLKSLQAKSSEASEDELSAAQNCLKRVEHLTEGCSTG
DIPSDSWKKVRLDRMLGI
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mRNA from alignment at LSalAtl2s1081:161683..162253+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000521-696368 ID=EMLSAT00000000521-696368|Name=EMLSAT00000000521|organism=Lepeophtheirus salmonis|type=mRNA|length=571bp|location=Sequence derived from alignment at LSalAtl2s1081:161683..162253+ (Lepeophtheirus salmonis)
ATGGCGGATATCAAAAATTTAGAACATCCTACTCTCAAAGTCCCCTATGA
GATCCTAAACAAACGCTTCCGGGCTACTCAAAAGGTGCTTGATCGAGAAG
TGTGTCAAATTACCCCTTCATTAGGACTGGAGGTTGATCTGTCAACTAAT
GTTTCAACTGCCATGGAAACTTTGACATTTTTGGAAGAGAAGCTCAAGAG
TCTTCAGGCTAAATCCTCAGAGGCGTCAGAAGATGAACTTTCCGCTGCTC
AAAACTGTTTGAAAAGAGTTGAACATTTGACAGAAGGATGTTCAACTGGG
GATATCCCTTCAGACTCGTGGAAGAAAGTTCGATTGGATAGAATGCTTGT
GGAGKATTTTCTCAGATCTGGATTCTATCAAACTGCTATCAAGCTGGCTG
ATTCAGGGAATCATATTTTATTAACAAACATGACATCAATAATAATATTC
AATATTTATAATAGTCTTCATTATTCATTTGATGTGTTGCATTGAGACAG
TTGATATCTTTTTCCTATGAGATTGATCCGTGTTTGTTATAAAAATTATA
TTCAATTTTCAGGGGATATAA
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