EMLSAT00000000536, EMLSAT00000000536-696383 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000536
Unique NameEMLSAT00000000536-696383
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1088supercontigLSalAtl2s1088:112569..114055 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000536 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000536EMLSAG00000000536-683302Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002315EMLSAE00000002315-711243Lepeophtheirus salmonisexon
EMLSAE00000002316EMLSAE00000002316-711244Lepeophtheirus salmonisexon
EMLSAE00000002317EMLSAE00000002317-711245Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772472auto772472Lepeophtheirus salmonispolypeptide
EMLSAP00000000536EMLSAP00000000536Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000536

>EMLSAP00000000536 ID=EMLSAP00000000536|Name=EMLSAP00000000536|organism=Lepeophtheirus salmonis|type=polypeptide|length=141bp
MMTMAPGMEGHHTPSSHGVSGGGSSSPSRAWYSTVDPSRYPHEHAAAAQG
LLAPEHHGETAFFGSSEASRYYQMHQAYETAANQARMSMYRPHWMPNMSG
XSAXHVAVQQQQQQHQQQQSWSGGSNSNNPSSSLTPSREPA
back to top

mRNA from alignment at LSalAtl2s1088:112569..114055+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000536-696383 ID=EMLSAT00000000536-696383|Name=EMLSAT00000000536|organism=Lepeophtheirus salmonis|type=mRNA|length=1487bp|location=Sequence derived from alignment at LSalAtl2s1088:112569..114055+ (Lepeophtheirus salmonis)
CTATGACTCTGTGACGTGAGACCCTTCGGTCTTCTTTGCCTACTCCTACG
AAGTTTTGTGTGCTCCTCTTTTCCTTCGTCTCATATGAGTTCGAGTTTTG
AAGAGAGATGAACCTTACTTAATAATAATAAGAGAGGAGAATCAGTTTAA
CAGTGTAATTAGATTTATATGTACATTCACATTTTATTTTGGCGAAAAAA
TAATTGAATTACTTCTTGACCCTATCATTAGTCCGTATATTATTTCTACA
AAGTAGTGAAGTGTGTTTTATCATTCTCTTATTCGATACGGAACCTATAC
ATATATATCGATAAAGGAAATAAGGGTTCAAAAAGGATCTTTGCAAAAAA
AAAAAAAAGTTTTGAATCAGACTTCAATTATTAGAAAACCAGGTAAGCTG
ACAAATCTTTAAGAAATTAATTGCTTCCCTACTGACGTTTCCATGGAATA
TTGAGTCCTGTATATGAATAACTCATGATCAGAAAAGTGGATTTCAATGT
ATCTATAAATATTTGATTCTTTACTCCATGTTTCTTTTTCCTTCTTTGAA
GGAAGCGAAAGGGGATTCAGAAGCTAGCCCTGATCTGTAAGTCCTCTTGA
TGCCCTTTCACAAAGTATGATGACCATGGCTCCGGGAATGGAGGGTCATC
ATACCCCGTCATCTCATGGKGTGTCTGGAGGAGGTTCCTCATCACCCTCA
AGAGCCTGGTATTCGACTGTGGATCCAAGTCGTTATCCACATGAGCATGC
TGCAGCGGCTCAAGGTCTCTTGGCTCCGGAGCACCACGGAGAAACCGCGT
TCTTTGGATCCTCTGAGGCATCACGATACTATCAAATGCATCAAGCCTAC
GAAACGGCTGCGAATCAAGGTAAATCCATGATTTTTAAGCAATCTGTTAG
CCTTGTTAAATAATAGTTTGCAAGAGATATTCTTTCTACATTATAAATAT
GTATATGCAATATTGTAAATTCTACACCACTTCCAAACCTCTCTTCTTTT
TATTCGACTTGTTTATAATAGTGAATGTGTATATGCTATGTATATAATGT
ATATTTGATTATTATCTCAATGTAATTTTCAGTTTTTATTTTTACTCTCT
CTCTCTCTCTCTCTTTCTCTGTACAACAACAATAATAATAATAATAACAT
AATGATAAAAGAACAAAGTACTGAGGCTTACAGCTGCCTCCGTATTCTAT
ATGCATATATATACATATTCATACGTTTAGAGACAATATTTATGACTAGA
AAAGTCCTCTTAATTATGTTTTATGTATCTACAAAACCAATTCTTATGTT
TTAAAACTGATTTCCAGCTCGAATGTCTATGTATCGCCCACATTGGATGC
CAAACATGTCAGGAAMCTCGGCGGMCCATGTTGCTGTTCAACAGCAGCAG
CAGCAGCATCAGCAACAGCAAAGTTGGTCCGGCGGCTCAAACAGTAACAA
TCCGTCGTCATCGTTAACCCCTTCCCGTGAGCCAGCC
back to top
Add to Basket