EMLSAT00000000549, EMLSAT00000000549-696396 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000549
Unique NameEMLSAT00000000549-696396
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s108supercontigLSalAtl2s108:35759..35988 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000549 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000549EMLSAG00000000549-683315Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002369EMLSAE00000002369-711297Lepeophtheirus salmonisexon
EMLSAE00000002370EMLSAE00000002370-711298Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770099auto770099Lepeophtheirus salmonispolypeptide
EMLSAP00000000549EMLSAP00000000549Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000549

>EMLSAP00000000549 ID=EMLSAP00000000549|Name=EMLSAP00000000549|organism=Lepeophtheirus salmonis|type=polypeptide|length=61bp
MIDFVHFAKKKSIIIFNLITYDNNTILFLKTSFNDVPIHLHKVNLFFNVV
LFCPYYMLSVI
back to top

mRNA from alignment at LSalAtl2s108:35759..35988-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000549-696396 ID=EMLSAT00000000549-696396|Name=EMLSAT00000000549|organism=Lepeophtheirus salmonis|type=mRNA|length=230bp|location=Sequence derived from alignment at LSalAtl2s108:35759..35988- (Lepeophtheirus salmonis)
ATGATTGATTTCGTGCATTTTGCAAAAAAAAAATCTATAATTATTTTCAA
TCTCATCACTTATGATAATAATACAATCCTATTTTTGTTTATTTTTTTTC
TTCTTTAAATTGACATTTATAATAATCAAGAAAGACCTCTTTTAATGATG
TTCCTATTCATTTACATAAGGTTAATCTTTTCTTCAACGTTGTTTTATTT
TGTCCCTATTATATGTTATCAGTTATATAA
back to top
Add to Basket