EMLSAT00000000553, EMLSAT00000000553-696400 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000553
Unique NameEMLSAT00000000553-696400
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s108supercontigLSalAtl2s108:507460..508614 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000553 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000553EMLSAG00000000553-683319Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002402EMLSAE00000002402-711330Lepeophtheirus salmonisexon
EMLSAE00000002403EMLSAE00000002403-711331Lepeophtheirus salmonisexon
EMLSAE00000002404EMLSAE00000002404-711332Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778264auto778264Lepeophtheirus salmonispolypeptide
EMLSAP00000000553EMLSAP00000000553Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000553

>EMLSAP00000000553 ID=EMLSAP00000000553|Name=EMLSAP00000000553|organism=Lepeophtheirus salmonis|type=polypeptide|length=285bp
MEILFWVVSFALSLSSLNSVSSLGTTQNLNISIYTPCLDDEECNKEGWSC
FQYFCYPWSEKADAPSPKHFEPCRRSKDCPVGEKGEKGECYRHHSRRRXT
SGICLDDVAECYSHDECGSRKCCNGNCCDGAYFEALKAFPCTTNDGCKDL
LLGELCCVNIMGALAFETSTPNWNKVCCDNNLGSPIVQIPQDISDEDLQK
IDHQISRMGVLKESICKGQEYDFMEMLPSCGNFTTTTTTTTTTPPTPKTT
QPKVQQSQTQTSDASQLVSILSNLFALCSLGVLLA
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mRNA from alignment at LSalAtl2s108:507460..508614-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000553-696400 ID=EMLSAT00000000553-696400|Name=EMLSAT00000000553|organism=Lepeophtheirus salmonis|type=mRNA|length=1155bp|location=Sequence derived from alignment at LSalAtl2s108:507460..508614- (Lepeophtheirus salmonis)
ATGGAGATCCTTTTTTGGGTAGTTTCTTTCGCTCTATCTCTCAGTTCCTT
GAATTCCGTTTCTTCCCTCGGCACGACTCAGAATTTAAACATTTCCATCT
ACACCCCCTGTCTGGATGATGAAGAATGTAACAAAGAGGGCTGGTCCTGC
TTTCAGTACTTTTGTTACCCCTGGTCTGAAAAGGCAGACGCTCCAAGCCC
AAAGCACTTTGAACCCTGTCGAAGAAGTAAGGATTGCCCTGTAGGTGAGA
AGGGGGAAAAAGGAGAATGCTACAGACATCATAGTCGGAGAAGGGMCACC
TCAGGGATTTGCTTGGACGACGTGGCTGAATGCTACTCCCATGATGAATG
TGGCTCAAGAAAGTGTTGCAATGGTAACTGCTGTGATGGTGCCTATTTTG
AGGCCCTTAAAGCATTCCCGTGCACCACGAACGATGGATGTAAAGTAAGT
CCCTCCTATTATCCACACCCATTTTCATCATGTATTTTAATTGAATTTGG
CGGGAAGGCATTTACATAATATGTATATGTGCTCATATTTAAATGTGTGA
ATGGGGGTGTCATATTCTATAATAGGATGATTCCATGAAGTGATTTGTAT
ACAATTTTCTATTTATACATGATGTTTTTTCTCCTTCTTTAATTTGTGCT
AGGATTTATTACTTGGAGAGCTTTGTTGTGTGAATATCATGGGTGCATTG
GCATTCGAAACATCTACACCCAACTGGAACAAAGTCTGCTGTGACAACAA
CCTTGGGAGCCCAATAGTACAAATCCCTCAGGATATTTCTGACGAGGACC
TTCAAAAAATTGATCATCAGATCTCAAGAATGGGAGTTCTTAAAGAAGTA
AGTTTAGATGTGTTTAGAGGTCTTTCAGAAAATGTACAAATATTCTAACT
CATTTTTTTATGTCTCTCTCTCCMTATTTTTTACAGTCCATTTGCAAAGG
ACAAGAGTATGATTTTATGGAGATGCTTCCTTCCTGTGGTAATTTCACAA
CCACTACAACAACGACCACGACGACKCCTCCAACACCTAAAACCACACAG
CCAAAAGTTCAGCAATCTCAGACTCAAACGTCTGATGCATCACAGCTAGT
TTCTATTCTGTCAAATCTCTTTGCTTTGTGTTCTCTTGGAGTGCTCCTAG
CATAG
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