EMLSAT00000000556, EMLSAT00000000556-696403 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000556
Unique NameEMLSAT00000000556-696403
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s108supercontigLSalAtl2s108:655411..655728 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000556 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000556EMLSAG00000000556-683322Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002417EMLSAE00000002417-711345Lepeophtheirus salmonisexon
EMLSAE00000002418EMLSAE00000002418-711346Lepeophtheirus salmonisexon
EMLSAE00000002419EMLSAE00000002419-711347Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779151auto779151Lepeophtheirus salmonispolypeptide
EMLSAP00000000556EMLSAP00000000556Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000556

>EMLSAP00000000556 ID=EMLSAP00000000556|Name=EMLSAP00000000556|organism=Lepeophtheirus salmonis|type=polypeptide|length=73bp
MNESNTFERSSQIQITYADIAHTYESLFSNYMDNRFIKVGIKNALFKNFI
GCIFVRFCEFLVKTCSNLQKKLH
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mRNA from alignment at LSalAtl2s108:655411..655728+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000556-696403 ID=EMLSAT00000000556-696403|Name=EMLSAT00000000556|organism=Lepeophtheirus salmonis|type=mRNA|length=318bp|location=Sequence derived from alignment at LSalAtl2s108:655411..655728+ (Lepeophtheirus salmonis)
ATGAATGAGTCGAAGTAATTGGTTATTGATAATTCTAGTACGTTTGAAAG
AAGTTCTCAAATTCAAATAACCTATGCTGATATTGCCCACACTTATGAGA
GTCTTTTTTCAAATTATATGGACAATCGTTTTATCAAAGTTGGTATAAAA
AATGCATTATTCAAAAATTTTATTGGGTAATATGGGTGATTTTTCGAAGC
GTTTTTTATTTATTTTTCAATTATTAAATTAATACTTTCCATCCCTAGGT
GCATTTTTGTAAGATTTTGTGAATTTCTTGTCAAAACATGTTCCAATCTC
CAAAAAAAATTACACTAA
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