EMLSAT00000000568, EMLSAT00000000568-696415 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000568
Unique NameEMLSAT00000000568-696415
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1094supercontigLSalAtl2s1094:119279..122247 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000568 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000568EMLSAG00000000568-683334Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002478EMLSAE00000002478-711406Lepeophtheirus salmonisexon
EMLSAE00000002479EMLSAE00000002479-711407Lepeophtheirus salmonisexon
EMLSAE00000002480EMLSAE00000002480-711408Lepeophtheirus salmonisexon
EMLSAE00000002481EMLSAE00000002481-711409Lepeophtheirus salmonisexon
EMLSAE00000002482EMLSAE00000002482-711410Lepeophtheirus salmonisexon
EMLSAE00000002483EMLSAE00000002483-711411Lepeophtheirus salmonisexon
EMLSAE00000002484EMLSAE00000002484-711412Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772607auto772607Lepeophtheirus salmonispolypeptide
EMLSAP00000000568EMLSAP00000000568Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000568

>EMLSAP00000000568 ID=EMLSAP00000000568|Name=EMLSAP00000000568|organism=Lepeophtheirus salmonis|type=polypeptide|length=278bp
MEHVDIKRLVKYLKKCTTPSGDCLFPFTYRGTHKICTIVDTNIYTKPWCY
LKDGGWDYCLDDCFDCGVSNDLGHSCQQQAEGSEGYFDNAVFPWHVRIIN
RRNKQILCNGVILTNDRVITTANCKGYYHKYGINVIAGSGTFFYIDGFQD
GIIKSFVAHEGYNPQTGENNIAIIGLHDRLVWNDRVLPICLTDNYLPIQD
GQSATCKSTPISGTHIFDTWSIVRYVHFSIVKVLPENIDKDCQNNDHLCT
TKNSVSEGVDEGGPLTHTCFSEGALAVY
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mRNA from alignment at LSalAtl2s1094:119279..122247-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000568-696415 ID=EMLSAT00000000568-696415|Name=EMLSAT00000000568|organism=Lepeophtheirus salmonis|type=mRNA|length=2969bp|location=Sequence derived from alignment at LSalAtl2s1094:119279..122247- (Lepeophtheirus salmonis)
ATGGAACATGGTATGAAATTGACTAACTATTCAAACAAGTTTAGTTAGAT
GATACTACCATGAGCCCCTGCGTTTATAACAACCAATTTTCCTACATATT
GTGCAATGTTTAATCAATTCCATGCTTGCATAATGCACAAAAAGGATAAT
ATATAGAACCAGTCGATGGTTGGGCATATTTTCCTTTGAGAGGAATATAA
AAATATAAATCCTCCTGATTCAGATGTTAAAGTTAAATTTTCTGGGTTTT
TTTTTATTCCAAGGATATATAATGCCATTATAATCAGACAAATAACATTT
GTTATGTCCAATCTGCAATAAAAAATACGCTCATGCTTAATTATACTGTA
AATAAACTTTCAATAATAATAAATGAAAAACATTAAAGTTAAACATTAAC
ATGCAACATTTTTGTAGTACTAAAAACTATAAATAAGTAATATTGAGTGG
CTCATTTGGCATAAGTGAGCAATGAAAGTACATTTTTTTATAATATATAA
TGCACACTTTGTATCAAAAAACAAGATTTGAGTAATACAAAAATAAATAG
AAACATACAAATAAATGTGCGAATACGGTAATATATGTATTAGTATTTGA
AACAAGAAATATCTAGAGTAACAACATAAAATAAATATTAAGTTAGTTAA
AATGGACTGAAATTAAATGCATTAAATTTTTTGATATGTACCTCTAACGG
AGAAATTTATTATCACAACTGATGGCTCATTTATTTGATCAACATTTTTT
TCTAAAGTTAAACGTGCTATATTCTACATTCTGATTATACACTTTTATGT
TTAAAATTATGAAGCATAAAAAGTTTATTTAATACCACTCCATTCATTTT
ACTTTTATCAAATATCTTATTCAAAATAATATCAATAATAGGAGATCAAT
AAGGTATTCTAATTTGAGCAGTAACAGTATATTTTACATATTCGGATCTG
GAACAGAAAAATACTCTATGGGAAAGCCATACTGCAATTATATAGTTTTG
GATAAGGGCTCCAAAATAGTATCGAAGCGGTGAATAAGGCTGAAAGCAGA
AATCTTAAATGGATATAACCTCTACTACATATTCAAGTTAAATAAATTGA
CTTTTTTGAATAAAAGTTTGCAATAAAGTTGTGGGGTGGCTTTCTTAAGG
GTGACAATTTTATCATTTCGTACTGTACCTCTATTAGAAATGAGTTGCAA
CTCTGTTTTCCACAAATATTTATTCTAGAACAGATGTGAACAAATATGAA
TTTGAATATTGTGTTTTCATAGGGTGTTATGACTTGAGTCTCAGGCCATT
TTAGGTTCGTAAATATTGTAGCACTTGTTATTTTATATTTCAGATACATA
TAAACTATATAATTTTTTTTCTTTTCAGTTGATATCAAGAGACTCGTCAA
ATATTTGAAAAGTAAATATAAAAATTGAATCCAAAGCTAATCCATGAGGA
TTATCACTATCTACATCTTGCTGAAGACATTAATTTCTGCTAATAGCAAA
GGTTTGTCCATTTAAAATTTATTTACTTTTATCACAAATATATTGAATAT
TATTAGAATGTACTACTCCGTCTGGAGATTGTTTATTTCCGTTCACATAC
CGTGGGACTCATAAAATTTGCACAATAGTGGATACAAATATCTATACTAA
GCCTTGGTGCTATTTAAAAGATGGAGGATGGGACTATTGCTTAGATGACT
GTTTTGGTAAGTGTCATAAACTTATTCTAGCAGTACAGAAACAATAATAA
TATTTTTATCAAGACTGTGGGGTATCTAACGATTTAGGGCACTCATGTCA
ACAGCAAGCAGAGGGTTCCGAAGGATATTTTGACAATGCTGTGTTCCCAT
GGCATGTACGTATCATAAACAGAAGAAACAAACAAATACTGTGTAATGGA
GTTATCCTAACCAATGATCGTGTGATAACTACAGCTAATTGTAAAGGATA
TTATCACAAATATGGAATTAATGTAAGTCTAGTATTTAGTTTATATAATA
ATAAATATTAAGGTTTTTAATAATATGTGCATTTGTTAAATACATATAAG
ACTTTCCTTTTTACATTAGGTAATTGCTGGATCGGGTACATTCTTCTATA
TTGATGGTTTTCAAGACGGAATAATTAAAAGTTTTGTTGCACATGAGGGT
TACAACCCTCAAACAGGTGAAAACAACATTGCCATAATTGGCCTACACGA
CAGATTAGTTTGGAATGATAGAGTCCTTCCCATTTGCCTAACTGACAATT
ATTTACCGATTCAGGACGGACAATCAGCAACTTGTAAGTCTACTCCAAGT
TAATTAAACAAATTTGAGCTAGGTACCACACGTAGTTATATTGTATTTTT
CAGTTTCTGGAACTCATATTTTCGACACTTGGAGTATAGTTCGATATGTT
CACTTTTCCATAGTAAAAGTATTGCCAGAAAATATCGACAAAGATTGCCA
AAATAATGACCATCTATGTACGACAAAAAACTCAGTAAGTGAAGGGGTTG
ATGAAGGAGGACCATTGACCGTATGTCAGGATTCAAAAAGATGTGTTTTG
GTTGGCATCCTATCGGGCATTAATACAAATAAAAATATTCTTGTTTTTAC
AAATATTTCAACACATTTAAAATGGATCTATAATCATATTTAAATTATAT
CTATCAGATTGATAATAAATTTTTTGAAGCATATTTGTGCGTGCACTTAA
ACTTAATATATCGAATGCATCAACAAACCACAATGTGATTAAGCAAAATT
AAAGAAGTTTACAGTAAGAAAAAAATAGATATATAGAGGACGACAAACGA
TAGTTTGCCATCTATTTATTGATAGGATTTTGAAGTTGCAAGACAGAATT
TAAACAAAAGCTTAGTTTAAAAGACTACGAATTCACAAAAATTAAATAAA
TAAAACATTTTTTTTTTTTTTGCAATTAAGCACACTTGTTTCTCTGAAGG
TGCTCTTGCTGTATACTAG
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